Aging Overview

Aging gene

Gene name: FXR1
Aging type: Prevent
Aging characteristic:
Tissue type: --
Cell name: UMSCC74A,UMSCC74B
Gene ID: 8087
Category: protein coding
Phenotype: Oral cancer
Experimental category: HL
PMID: 27606879
Experiment: Knockdown//Flow cytometry//SA-β-Gal activity assay
Description: To investigate the underlying mechanism of reduction in number of viable cells following FXR1 KD, we performed cell cycle analysis of the FXR1 KD and control cells by flow cytometry. FXR1 KD induces cell cycle arrest in G /G1 providing evidence that FXR1 might regulate cell division in oral cancer.Silencing of FXR1 in multiple oral cancer cells also promotes senescence by positive SA-β-gal staining.


Regulatory relationship

Target gene: TERC
Official symbol(s): TERC
R-AG-Target gene: Inhibition
Subcategory: Unclear
Target gene experiment: Luciferase reporter assay
Target gene description: When full-length and truncated TERC (28 base deletion at 5’-end,TERCmut) are used for luciferase assay,TERC exhibits increased luciferase activity in control cells compared to TERCmut. However, in FXR1 KD cells, TERC exhibits a decreased luciferase activity compared to TERCmut indicating that FXR1 binds to specific G-rich sequences in these RNAs and possibly controls their turnover.Silencing of FXR1 reduces the level of TERC and subsequently interferes with the telomerase activity.

Regulatory pathway: P53-P21
R-AG-Pathway: --
Official symbol(s): TP53-CDKN1A
Pathway experiment: RT-PCR//Western Blot
Pathway description: Upregulation ofp53 and p21 protein levels are observed in the absence of FXR1 in WT p53 cell line.RT-PCR、Western Blot:overexpressed FXR1 in HNSCC destabilizes p21 mRNA and reduces its protein expression.concurrent overexpression of p21 and silencing of TERC significantly promoted senescence evidenced by staining of SA-β-gal.


Aging network

Annotation:

The green line represents Upregulation.

The purple line represents Downregulation.

The orange line represents Activation.

The yellow line represents Inhibition.

The gray line represents Unclear.



Pathway view

About risk SNP and eQTL

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