Cancer CRCdb

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_114	Cell line	Mammary Gland	CAL51	0.0050251256281407
Sample_02_322	Cell line	Colon	Caco-2	0.0013458950201884

Sample ID	Tissue type	Biosample type	Biosample name
Sample_02_114	Mammary Gland	Cell line	CAL51

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of ZBED1

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chrX	2406968	2406968	A	G	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chrX	2406848	2406848	G	A	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
rs763127290	chrX	2407160	2407160	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2408604	2408604	G	A	exonic	ZBED1	stopgain	SARC\|1\|247\|0.00405
-	chrX	2406877	2406877	C	A	exonic	ZBED1	synonymous	LUAD\|1\|543\|0.00184
-	chrX	2407265	2407265	T	A	exonic	ZBED1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chrX	2408288	2408288	G	A	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
rs371214650	chrX	2406920	2406920	G	A	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
rs199725990	chrX	2408097	2408097	C	T	exonic	ZBED1	nonsynonymous	HNSC\|1\|512\|0.00195,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs747063221	chrX	2408700	2408700	C	T	exonic	ZBED1	nonsynonymous	BLCA\|1\|396\|0.00253,PCPG\|1\|184\|0.00543
-	chrX	2406797	2406797	G	A	exonic	ZBED1	nonsynonymous	PAAD\|1\|185\|0.00541
-	chrX	2408336	2408336	G	A	exonic	ZBED1	nonsynonymous	CESC\|1\|194\|0.00515
rs141687518	chrX	2407993	2407993	G	A	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408449	2408449	C	A	exonic	ZBED1	nonsynonymous	PAAD\|1\|185\|0.00541
-	chrX	2407144	2407144	-	G	exonic	ZBED1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chrX	2408546	2408546	G	A	exonic	ZBED1	nonsynonymous	SKCM\|2\|368\|0.00543
rs775831950	chrX	2408490	2408490	C	T	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2406919	2406919	C	T	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408484	2408484	C	T	exonic	ZBED1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chrX	2406829	2406829	C	A	exonic	ZBED1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chrX	2407843	2407843	C	T	exonic	ZBED1	synonymous	BRCA\|1\|982\|0.00102
-	chrX	2406784	2406784	G	T	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
-	chrX	2407512	2407512	G	A	exonic	ZBED1	nonsynonymous	ESCA\|1\|185\|0.00541
-	chrX	2407908	2407908	C	T	exonic	ZBED1	nonsynonymous	PRAD\|1\|499\|0.00200
-	chrX	2408758	2408758	C	T	exonic	ZBED1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chrX	2407791	2407791	G	A	exonic	ZBED1	stopgain	LUAD\|1\|543\|0.00184
rs201137609	chrX	2406915	2406915	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
rs751355986	chrX	2407293	2407293	G	A	exonic	ZBED1	nonsynonymous	PRAD\|1\|499\|0.00200
-	chrY	2357144	2357144	-	G	exonic	ZBED1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chrX	2407352	2407352	T	C	exonic	ZBED1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chrX	2407741	2407741	G	A	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2407150	2407150	C	T	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408192	2408192	T	C	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408251	2408251	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
-	chrX	2406963	2406963	G	A	exonic	ZBED1	synonymous	BLCA\|1\|396\|0.00253
rs373098167	chrX	2408217	2408217	C	T	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408674	2408674	G	T	exonic	ZBED1	nonsynonymous	BRCA\|1\|982\|0.00102
rs760041224	chrX	2408016	2408016	G	A	exonic	ZBED1	stopgain	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs776679539	chrX	2407936	2407936	G	A	exonic	ZBED1	synonymous	PRAD\|1\|499\|0.00200
rs371626336	chrX	2408419	2408419	G	A	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2407922	2407922	G	A	exonic	ZBED1	nonsynonymous	HNSC\|1\|512\|0.00195
rs776217070	chrX	2406876	2406876	C	A	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2408366	2408366	C	T	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2406965	2406965	G	A	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
rs775087899	chrX	2408412	2408412	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
rs769216157	chrX	2408252	2408252	G	T	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chrX	2408658	2408658	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2407851	2407851	G	T	exonic	ZBED1	nonsynonymous	ESCA\|1\|185\|0.00541
-	chrX	2407647	2407647	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
rs769523414	chrX	2406918	2406918	G	A	exonic	ZBED1	nonsynonymous	BRCA\|1\|982\|0.00102
-	chrX	2408255	2408255	G	C	exonic	ZBED1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chrX	2407570	2407570	C	A	exonic	ZBED1	synonymous	LUAD\|2\|543\|0.00368
rs150600366	chrX	2408599	2408599	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
-	chrX	2408367	2408367	C	A	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2406844	2406844	C	T	exonic	ZBED1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,UCEC\|1\|248\|0.00403
rs768286242	chrX	2406874	2406874	G	A	exonic	ZBED1	synonymous	BLCA\|1\|396\|0.00253
-	chrX	2408434	2408434	C	T	exonic	ZBED1	synonymous	DLBC\|1\|48\|0.02083
-	chrX	2406990	2406990	A	G	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408164	2408165	GT	-	exonic	ZBED1	frameshift	ESCA\|1\|185\|0.00541
-	chrX	2408667	2408667	C	T	exonic	ZBED1	nonsynonymous	UCEC\|2\|248\|0.00806
-	chrX	2406722	2406722	C	G	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs771189505	chrX	2407161	2407161	G	A	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
rs777092860	chrX	2408326	2408326	G	A	exonic	ZBED1	synonymous	ESCA\|1\|185\|0.00541
-	chrX	2408602	2408602	C	G	exonic	ZBED1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chrX	2407051	2407051	C	A	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2406764	2406764	T	C	exonic	ZBED1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189,SKCM\|1\|368\|0.00272,TGCT\|1\|155\|0.00645,THCA\|1\|504\|0.00198
-	chrX	2408423	2408423	T	C	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2406709	2406709	-	C	exonic	ZBED1	frameshift	LIHC\|1\|373\|0.00268
-	chrX	2407023	2407023	C	A	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2408076	2408076	C	A	exonic	ZBED1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chrX	2408485	2408485	G	T	exonic	ZBED1	synonymous	LUSC\|1\|178\|0.00562
-	chrX	2408349	2408349	G	A	exonic	ZBED1	synonymous	BRCA\|1\|982\|0.00102
-	chrX	2408374	2408374	G	A	exonic	ZBED1	synonymous	PAAD\|1\|185\|0.00541
-	chrX	2408513	2408513	G	A	exonic	ZBED1	nonsynonymous	DLBC\|1\|48\|0.02083,GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chrX	2407129	2407129	G	C	exonic	ZBED1	nonsynonymous	BLCA\|1\|396\|0.00253
rs373718839	chrX	2407814	2407814	C	T	exonic	ZBED1	nonsynonymous	PAAD\|1\|185\|0.00541
rs748700879	chrX	2407457	2407457	T	C	exonic	ZBED1	nonsynonymous	BLCA\|1\|396\|0.00253
rs201308386	chrX	2406722	2406722	C	A	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs781584629	chrX	2406811	2406811	G	A	exonic	ZBED1	synonymous	ESCA\|1\|185\|0.00541
-	chrX	2407722	2407722	C	T	exonic	ZBED1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chrX	2407837	2407837	-	A	exonic	ZBED1	frameshift	LUAD\|1\|543\|0.00184
-	chrX	2408626	2408626	G	A	exonic	ZBED1	synonymous	LUSC\|1\|178\|0.00562
-	chrX	2408527	2408527	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
rs779576731	chrX	2406917	2406917	C	T	exonic	ZBED1	nonsynonymous	PAAD\|1\|185\|0.00541
rs199576271	chrX	2408502	2408502	G	A	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2408506	2408506	C	A	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs199678782	chrX	2407376	2407376	G	A	exonic	ZBED1	nonsynonymous	LIHC\|1\|373\|0.00268
rs142634106	chrX	2406791	2406791	G	A	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2407889	2407889	A	G	exonic	ZBED1	nonsynonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chrX	2406910	2406910	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
-	chrX	2408168	2408169	GT	-	exonic	ZBED1	frameshift	ESCA\|1\|185\|0.00541
-	chrX	2407797	2407797	A	C	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2408092	2408092	G	-	exonic	ZBED1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,LIHC\|1\|373\|0.00268
-	chrX	2408734	2408734	G	T	exonic	ZBED1	synonymous	BRCA\|1\|982\|0.00102
-	chrX	2408297	2408297	G	A	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2407560	2407560	G	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
rs200767154	chrX	2407303	2407303	G	A	exonic	ZBED1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408325	2408325	C	T	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2408331	2408331	C	T	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2408702	2408702	C	T	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2407717	2407717	G	A	exonic	ZBED1	synonymous	BRCA\|1\|982\|0.00102
-	chrX	2406934	2406934	C	A	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2406967	2406967	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
rs141520513	chrX	2407351	2407351	G	A	exonic	ZBED1	synonymous	LUAD\|1\|543\|0.00184,UCEC\|1\|248\|0.00403
-	chrX	2408381	2408381	G	A	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2407124	2407124	T	A	exonic	ZBED1	nonsynonymous	OV\|1\|469\|0.00213
-	chrX	2408368	2408368	C	T	exonic	ZBED1	synonymous	HNSC\|1\|512\|0.00195
rs377517735	chrX	2407561	2407561	G	A	exonic	ZBED1	synonymous	THCA\|1\|504\|0.00198
-	chrX	2407787	2407787	G	C	exonic	ZBED1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chrX	2407120	2407120	C	T	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408343	2408343	G	T	exonic	ZBED1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chrX	2408225	2408225	G	A	exonic	ZBED1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chrX	2408474	2408474	T	A	exonic	ZBED1	nonsynonymous	LIHC\|1\|373\|0.00268
-	chrX	2407032	2407032	A	C	exonic	ZBED1	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
-	chrX	2408704	2408704	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272
-	chrX	2407778	2407778	G	A	exonic	ZBED1	nonsynonymous	PRAD\|1\|499\|0.00200
rs370752942	chrX	2408224	2408224	G	A	exonic	ZBED1	synonymous	SKCM\|2\|368\|0.00543,UCEC\|1\|248\|0.00403
-	chrX	2408726	2408726	T	C	exonic	ZBED1	nonsynonymous	UCEC\|1\|248\|0.00403
-	chrX	2407653	2407653	C	T	exonic	ZBED1	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chrX	2408700	2408700	C	A	exonic	ZBED1	nonsynonymous	LIHC\|1\|373\|0.00268
rs772761841	chrX	2407462	2407462	C	T	exonic	ZBED1	synonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122,UCEC\|1\|248\|0.00403
rs771509152	chrX	2407648	2407648	G	A	exonic	ZBED1	synonymous	SKCM\|1\|368\|0.00272

TF name:	ZBED1
TF family:	zf-BED
Ensembl gene ID:	ENSG00000214717
Ensembl protein ID:	ENSP00000370621, ENSP00000370616, ENSP00000419148, ENSP00000370620
Entrez gene ID:	9189

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

TF_name	Disease_name	Disease_class	Disease_semantic_type	TF_disease_source
ZBED1	Prostatic Neoplasms	C04;C12	Neoplastic Process	CTD_human
ZBED1	Malignant neoplasm of prostate	C04;C12	Neoplastic Process	CTD_human

TF information

TCGA somatic mutations and clinical variants of ZBED1

Survival analysis of ZBED1

Expression of ZBED1