Cancer CRCdb

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_095	Cell line	Mammary Gland	MDA-MB-468	0.24747081712062
Sample_02_168	Cell line	Prostate	LNCaP	0.022813688212928

Sample ID	Tissue type	Biosample type	Biosample name
Sample_02_168	Prostate	Cell line	LNCaP

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of TFCP2L1

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr2	121989510	121989510	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
-	chr2	122038776	122038776	G	A	exonic	TFCP2L1	nonsynonymous	HNSC\|1\|512\|0.00195
rs779140067	chr2	121997187	121997187	G	A	exonic	TFCP2L1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	122038815	122038815	T	C	exonic	TFCP2L1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs145068402	chr2	121989537	121989537	G	A	exonic	TFCP2L1	synonymous	HNSC\|1\|512\|0.00195
-	chr2	122005828	122005828	C	T	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
rs148066295	chr2	122004466	122004466	C	T	exonic	TFCP2L1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	121997185	121997185	G	A	exonic	TFCP2L1	nonsynonymous	UCEC\|1\|248\|0.00403
rs367686992	chr2	121997139	121997139	G	A	exonic	TFCP2L1	synonymous	UCEC\|1\|248\|0.00403
-	chr2	122005806	122005806	G	A	exonic	TFCP2L1	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr2	121981961	121981961	C	G	exonic	TFCP2L1	nonsynonymous	BRCA\|1\|982\|0.00102,LUSC\|1\|178\|0.00562
rs768235839	chr2	121989409	121989409	C	T	exonic	TFCP2L1	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
rs764851303	chr2	122000043	122000043	C	T	exonic	TFCP2L1	synonymous	SARC\|1\|247\|0.00405
-	chr2	122007204	122007204	T	A	exonic	TFCP2L1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	121991733	121991733	C	G	exonic	TFCP2L1	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr2	121989525	121989525	C	G	exonic	TFCP2L1	synonymous	CESC\|1\|194\|0.00515
-	chr2	122007162	122007162	G	A	exonic	TFCP2L1	synonymous	UCEC\|1\|248\|0.00403
-	chr2	121989456	121989456	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
-	chr2	121992798	121992798	G	A	exonic	TFCP2L1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs143023699	chr2	121997199	121997199	G	A	exonic	TFCP2L1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	122004453	122004453	C	T	exonic	TFCP2L1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr2	121995203	121995203	G	A	exonic	TFCP2L1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs758603684	chr2	121995414	121995414	C	T	exonic	TFCP2L1	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr2	122038831	122038831	G	A	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr2	122000030	122000030	G	A	exonic	TFCP2L1	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	122038720	122038720	C	G	exonic	TFCP2L1	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr2	121989507	121989507	C	T	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
-	chr2	121995273	121995273	G	T	exonic	TFCP2L1	stopgain	ESCA\|1\|185\|0.00541
rs752230601	chr2	121995390	121995390	G	A	exonic	TFCP2L1	synonymous	HNSC\|1\|512\|0.00195
-	chr2	121995273	121995273	G	A	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr2	122038784	122038784	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
-	chr2	122042681	122042681	A	T	exonic	TFCP2L1	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
rs765369796	chr2	122000033	122000033	C	T	exonic	TFCP2L1	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,UCEC\|1\|248\|0.00403
rs777892301	chr2	122004502	122004502	G	A	exonic	TFCP2L1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr2	121999993	121999993	C	A	exonic	TFCP2L1	nonsynonymous	UCEC\|1\|248\|0.00403
rs369288918	chr2	121997211	121997211	G	A	exonic	TFCP2L1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr2	121992863	121992863	C	T	exonic	TFCP2L1	nonsynonymous	STAD\|3\|395\|0.00759,STES\|3\|395\|0.00759
-	chr2	121981961	121981961	C	T	exonic	TFCP2L1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr2	122004422	122004422	G	A	exonic	TFCP2L1	nonsynonymous	BLCA\|1\|396\|0.00253
rs764238186	chr2	122038715	122038715	C	T	exonic	TFCP2L1	synonymous	HNSC\|1\|512\|0.00195
-	chr2	122007186	122007186	C	T	exonic	TFCP2L1	synonymous	SKCM\|2\|368\|0.00543
-	chr2	121991770	121991770	C	T	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
rs150968715	chr2	122006619	122006619	C	T	exonic	TFCP2L1	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr2	121991665	121991665	A	T	splicing	TFCP2L1	splicing	LIHC\|1\|373\|0.00268
-	chr2	121989422	121989422	G	A	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr2	122005784	122005784	C	T	exonic	TFCP2L1	nonsynonymous	LIHC\|1\|373\|0.00268,PAAD\|1\|185\|0.00541
-	chr2	122042677	122042677	G	A	exonic	TFCP2L1	synonymous	BLCA\|2\|396\|0.00505
rs767673093	chr2	121989453	121989453	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
-	chr2	122007206	122007206	G	A	exonic	TFCP2L1	stopgain	CESC\|1\|194\|0.00515
-	chr2	121989511	121989511	G	A	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr2	121995228	121995228	T	C	exonic	TFCP2L1	nonsynonymous	BRCA\|1\|982\|0.00102
rs762684667	chr2	121997154	121997154	G	A	exonic	TFCP2L1	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr2	122004538	122004538	G	A	exonic	TFCP2L1	synonymous	BRCA\|1\|982\|0.00102
-	chr2	122038752	122038752	G	A	exonic	TFCP2L1	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr2	121995289	121995289	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
rs763242950	chr2	122038802	122038802	C	A	exonic	TFCP2L1	synonymous	BLCA\|1\|396\|0.00253
-	chr2	121991738	121991738	C	T	exonic	TFCP2L1	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
-	chr2	121991727	121991727	C	G	exonic	TFCP2L1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr2	121989435	121989435	-	C	exonic	TFCP2L1	frameshift	LIHC\|1\|373\|0.00268
-	chr2	121989464	121989464	G	-	exonic	TFCP2L1	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr2	122038813	122038813	C	T	exonic	TFCP2L1	nonsynonymous	OV\|1\|469\|0.00213
rs137971940	chr2	121997182	121997182	G	A	exonic	TFCP2L1	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr2	122007221	122007221	G	C	exonic	TFCP2L1	nonsynonymous	LUSC\|1\|178\|0.00562
rs141932688	chr2	121997207	121997207	C	T	exonic	TFCP2L1	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
rs747701705	chr2	122007205	122007205	C	T	exonic	TFCP2L1	nonsynonymous	PRAD\|1\|499\|0.00200
-	chr2	122005742	122005742	G	A	exonic	TFCP2L1	stopgain	BLCA\|1\|396\|0.00253
-	chr2	122005761	122005761	C	T	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
rs372397557	chr2	121992811	121992811	G	A	exonic	TFCP2L1	synonymous	OV\|1\|469\|0.00213
-	chr2	121995282	121995282	G	A	exonic	TFCP2L1	nonsynonymous	CESC\|1\|194\|0.00515
rs777311074	chr2	121991717	121991717	C	T	exonic	TFCP2L1	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr2	122004483	122004483	G	A	exonic	TFCP2L1	stopgain	LUAD\|1\|543\|0.00184,UCEC\|1\|248\|0.00403
-	chr2	121995289	121995289	G	T	exonic	TFCP2L1	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr2	121999986	121999986	G	T	exonic	TFCP2L1	synonymous	LUAD\|1\|543\|0.00184
-	chr2	121989414	121989414	C	A	exonic	TFCP2L1	synonymous	UCEC\|1\|248\|0.00403
rs140466557	chr2	121991692	121991692	G	A	exonic	TFCP2L1	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr2	121995290	121995290	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272
rs61734658	chr2	122007207	122007207	G	A	exonic	TFCP2L1	synonymous	SKCM\|1\|368\|0.00272

TF name:	TFCP2L1
TF family:	CP2
Ensembl gene ID:	ENSG00000115112
Ensembl protein ID:	ENSP00000263707
Entrez gene ID:	29842

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

GO_term_name	GO_term_type	TF_name
GO_MULTICELLULAR_ORGANISM_AGING	BP	TFCP2L1
GO_SALIVARY_GLAND_DEVELOPMENT	BP	TFCP2L1
GO_EXOCRINE_SYSTEM_DEVELOPMENT	BP	TFCP2L1
GO_POSITIVE_REGULATION_OF_GROWTH	BP	TFCP2L1
GO_MULTI_MULTICELLULAR_ORGANISM_PROCESS	BP	TFCP2L1
GO_CELLULAR_COMPONENT_MORPHOGENESIS	BP	TFCP2L1
GO_DETERMINATION_OF_ADULT_LIFESPAN	BP	TFCP2L1
GO_EPITHELIAL_CELL_MATURATION	BP	TFCP2L1

TF information

TCGA somatic mutations and clinical variants of TFCP2L1

Survival analysis of TFCP2L1

Expression of TFCP2L1