Cancer CRCdb

TF information

TF name:	GLIS3
TF family:	zf-C2H2
Ensembl gene ID:	ENSG00000107249
Ensembl protein ID:	ENSP00000371398, ENSP00000325494
Entrez gene ID:	169792

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

Frequency of GLIS3 in all biosamples

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Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_114	Cell line	Mammary Gland	CAL51	0.1105527638191
Sample_02_166	Cell line	Mammary Gland	HCC1954_Parental	0.26
Sample_02_204	Cell line	Stomach	IM95	0.13636363636364
Sample_02_268	Cell line	Kidney	A-498	0.52870592578918

GLIS3 distribution in samples’ most representative CRC

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Sample ID	Tissue type	Biosample type	Biosample name

GLIS3 distribution in all CRCs

Genomic distribution of SEs associated with GLIS3

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Mutation of GLIS3

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Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of GLIS3

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr9	4117826	4117828	CGG	-	exonic	GLIS3	nonframeshift	LUAD\|1\|543\|0.00184
-	chr9	3829339	3829339	C	T	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
rs376905545	chr9	4118651	4118651	G	A	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4118600	4118600	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4118392	4118392	C	T	exonic	GLIS3	synonymous	SKCM\|1\|368\|0.00272
-	chr9	3829368	3829368	C	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs75462592	chr9	4118262	4118262	C	A	exonic	GLIS3	nonsynonymous	DLBC\|1\|48\|0.02083
-	chr9	3856161	3856161	G	A	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	3879429	3879429	C	T	exonic	GLIS3	synonymous	LUAD\|1\|543\|0.00184
rs201142941	chr9	4286285	4286285	C	T	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
-	chr9	3856176	3856176	G	T	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	3856040	3856040	A	G	exonic	GLIS3	synonymous	KICH\|1\|66\|0.01515,KIPAN\|1\|799\|0.00125
-	chr9	4125916	4125916	G	A	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
-	chr9	4125771	4125771	T	C	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	4118407	4118407	G	T	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4118581	4118581	C	A	exonic	GLIS3	nonsynonymous	UCS\|1\|57\|0.01754
-	chr9	3829444	3829444	G	C	exonic	GLIS3	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr9	3828287	3828287	G	C	exonic	GLIS3	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	4286213	4286213	C	A	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	4286122	4286122	G	A	exonic	GLIS3	stopgain	SKCM\|1\|368\|0.00272
-	chr9	4118110	4118110	T	G	exonic	GLIS3	synonymous	THCA\|1\|504\|0.00198
rs777119496	chr9	3828281	3828281	G	A	exonic	GLIS3	synonymous	PRAD\|1\|499\|0.00200
-	chr9	4117826	4117826	C	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3932361	3932361	T	-	exonic	GLIS3	frameshift	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3898796	3898796	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs775044065	chr9	4118141	4118141	G	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3937084	3937084	T	G	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs143229220	chr9	4118848	4118848	C	T	exonic	GLIS3	synonymous	SKCM\|1\|368\|0.00272
rs758753292	chr9	3937058	3937058	G	A	exonic	GLIS3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3856041	3856041	G	A	exonic	GLIS3	nonsynonymous	UVM\|1\|80\|0.01250
rs755318788	chr9	4118148	4118148	G	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs764619575	chr9	4286207	4286207	G	A	exonic	GLIS3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3829394	3829394	C	A	exonic	GLIS3	stopgain	CESC\|1\|194\|0.00515
-	chr9	4118530	4118530	G	A	exonic	GLIS3	synonymous	SKCM\|1\|368\|0.00272
rs199976011	chr9	4286000	4286000	G	A	intronic	GLIS3	unknown	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr9	4118143	4118143	G	-	exonic	GLIS3	frameshift	STAD\|2\|395\|0.00506,STES\|2\|395\|0.00506
-	chr9	3856103	3856103	C	T	exonic	GLIS3	synonymous	HNSC\|1\|512\|0.00195
-	chr9	3971093	3971113	TAGATCGAAGGAAGGAAGGAA	-	intronic	GLIS3	unknown	-
-	chr9	4118552	4118552	G	C	exonic	GLIS3	nonsynonymous	SARC\|1\|247\|0.00405
-	chr9	4118378	4118378	C	T	exonic	GLIS3	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr9	3937164	3937164	G	A	exonic	GLIS3	nonsynonymous	HNSC\|2\|512\|0.00391
-	chr9	4118134	4118134	C	T	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	3937124	3937124	T	A	exonic	GLIS3	synonymous	LUAD\|1\|543\|0.00184
-	chr9	4118146	4118146	G	T	exonic	GLIS3	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	4118563	4118563	C	A	exonic	GLIS3	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr9	3932396	3932396	C	T	exonic	GLIS3	synonymous	SKCM\|1\|368\|0.00272
-	chr9	4118290	4118290	T	C	exonic	GLIS3	synonymous	BLCA\|1\|396\|0.00253
-	chr9	3898796	3898796	C	G	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
rs748493859	chr9	4118618	4118618	C	T	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4125859	4125859	C	T	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253,SKCM\|1\|368\|0.00272
rs770212930	chr9	4118504	4118504	G	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	4117922	4117922	C	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs753764072	chr9	4118581	4118581	C	G	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	4118592	4118592	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs759183029	chr9	4117860	4117860	C	T	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4118013	4118013	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs752036990	chr9	4117963	4117963	G	A	exonic	GLIS3	synonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
rs774124083	chr9	4118184	4118184	G	A	exonic	GLIS3	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr9	3937152	3937152	T	A	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
rs368943263	chr9	4118541	4118541	C	T	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	3829444	3829444	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs749999750	chr9	3828391	3828391	T	C	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs76094493	chr9	3828379	3828379	G	A	exonic	GLIS3	nonsynonymous	LAML\|1\|197\|0.00508
-	chr9	4118625	4118625	T	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4286057	4286057	A	-	exonic	GLIS3	frameshift	PAAD\|1\|185\|0.00541
-	chr9	3937135	3937135	G	A	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	3898798	3898798	G	T	exonic	GLIS3	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr9	4118105	4118105	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	3937160	3937160	C	A	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
rs759160830	chr9	3829449	3829449	G	A	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
-	chr9	3829391	3829391	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4117903	4117903	G	A	exonic	GLIS3	synonymous	BRCA\|1\|982\|0.00102
rs200702915	chr9	3971094	3971113	AGATCGAAGGAAGGAAGGAA	-	intronic	GLIS3	unknown	-
-	chr9	4117907	4117907	A	G	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4118413	4118413	G	A	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4117892	4117892	C	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3932889	3932889	-	A	intronic	GLIS3	unknown	ESCA\|1\|185\|0.00541
-	chr9	3879431	3879431	C	G	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
rs181328309	chr9	4117769	4117769	G	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	3879532	3879532	G	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	3937183	3937183	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs371355667	chr9	4117945	4117945	G	A	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs562740663	chr9	4118007	4118007	C	T	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
rs201556131	chr9	3898784	3898784	C	T	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	3829318	3829318	C	-	exonic	GLIS3	frameshift	LUSC\|1\|178\|0.00562
-	chr9	3856151	3856151	G	T	exonic	GLIS3	synonymous	ESCA\|1\|185\|0.00541
-	chr9	3932421	3932421	G	A	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
rs6415788	chr9	4118111	4118111	G	T	exonic	GLIS3	nonsynonymous	KICH\|1\|66\|0.01515,KIPAN\|1\|799\|0.00125
-	chr9	4125879	4125879	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4118739	4118739	C	A	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr9	3827920	3827920	G	A	UTR3	GLIS3	unknown	CESC\|1\|194\|0.00515
-	chr9	4118682	4118682	A	T	exonic	GLIS3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr9	3828335	3828335	G	A	exonic	GLIS3	synonymous	BLCA\|2\|396\|0.00505
-	chr9	3856099	3856099	G	C	exonic	GLIS3	nonsynonymous	OV\|1\|469\|0.00213
-	chr9	4286371	4286371	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4118870	4118870	G	A	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	4286116	4286116	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs765858803	chr9	4286240	4286240	C	T	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	4118512	4118512	C	T	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	3937169	3937169	G	A	exonic	GLIS3	synonymous	SKCM\|1\|368\|0.00272
rs772874731	chr9	3829351	3829351	T	C	exonic	GLIS3	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr9	3898693	3898693	G	A	exonic	GLIS3	nonsynonymous	CESC\|1\|194\|0.00515
-	chr9	4286390	4286390	C	A	exonic	GLIS3	synonymous	BLCA\|1\|396\|0.00253
-	chr9	4117986	4117986	C	A	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr9	3856175	3856175	A	C	exonic	GLIS3	synonymous	BRCA\|1\|982\|0.00102
rs537966660	chr9	3856144	3856144	G	A	exonic	GLIS3	nonsynonymous	PRAD\|1\|499\|0.00200
rs771158269	chr9	3828373	3828373	C	T	exonic	GLIS3	nonsynonymous	CESC\|1\|194\|0.00515
rs750080742	chr9	3898785	3898785	G	A	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
-	chr9	3879545	3879545	C	-	exonic	GLIS3	frameshift	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	3879436	3879436	C	T	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	4286155	4286155	G	A	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	3932366	3932366	C	A	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr9	3932428	3932428	T	C	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	4117916	4117916	A	G	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs200195201	chr9	4286193	4286193	C	T	exonic	GLIS3	nonsynonymous	CHOL\|1\|35\|0.02857
-	chr9	3937029	3937029	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	3898791	3898791	G	A	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4125879	4125879	C	A	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
rs759784205	chr9	4125841	4125841	G	A	exonic	GLIS3	synonymous	BLCA\|1\|396\|0.00253
rs200950499	chr9	4286392	4286392	G	A	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4286347	4286347	G	A	exonic	GLIS3	nonsynonymous	BRCA\|1\|982\|0.00102
rs146067479	chr9	4118781	4118781	C	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs187615896	chr9	3856122	3856122	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs756792178	chr9	4117861	4117861	G	A	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4118080	4118080	C	T	exonic	GLIS3	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4299661	4299661	C	A	UTR5	GLIS3	unknown	BRCA\|1\|982\|0.00102
-	chr9	3829379	3829379	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4118024	4118024	G	A	exonic	GLIS3	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr9	4299597	4299597	G	A	UTR5	GLIS3	unknown	CESC\|1\|194\|0.00515
-	chr9	4286060	4286060	A	G	exonic	GLIS3	synonymous	CHOL\|1\|35\|0.02857
-	chr9	3829449	3829449	G	T	exonic	GLIS3	synonymous	TGCT\|1\|155\|0.00645
-	chr9	3937126	3937126	T	C	exonic	GLIS3	nonsynonymous	THCA\|1\|504\|0.00198
-	chr9	4125836	4125836	G	T	exonic	GLIS3	stopgain	CESC\|1\|194\|0.00515
-	chr9	4125815	4125815	G	C	exonic	GLIS3	nonsynonymous	CESC\|1\|194\|0.00515
-	chr9	4118717	4118717	A	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs757118860	chr9	4286286	4286286	G	A	exonic	GLIS3	nonsynonymous	SKCM\|3\|368\|0.00815
rs748922836	chr9	3937095	3937095	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4286248	4286248	G	T	exonic	GLIS3	nonsynonymous	DLBC\|1\|48\|0.02083
-	chr9	4118187	4118187	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	3829411	3829411	C	G	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	3932409	3932409	C	T	exonic	GLIS3	nonsynonymous	CESC\|1\|194\|0.00515
-	chr9	4286007	4286007	T	-	intronic	GLIS3	unknown	ESCA\|1\|185\|0.00541
-	chr9	4117878	4117878	A	G	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr9	4117864	4117864	C	T	exonic	GLIS3	stopgain	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	4286252	4286252	G	A	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs777777838	chr9	3856069	3856069	G	A	exonic	GLIS3	synonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
rs748645578	chr9	4118102	4118102	G	-	exonic	GLIS3	frameshift	CHOL\|1\|35\|0.02857
-	chr9	4117896	4117896	G	A	exonic	GLIS3	stopgain	UCEC\|1\|248\|0.00403
rs780172059	chr9	3829399	3829399	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272,UCEC\|1\|248\|0.00403
-	chr9	3856009	3856009	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs751461025	chr9	3829457	3829457	G	A	exonic	GLIS3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr9	3829319	3829319	C	A	exonic	GLIS3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr9	4117800	4117800	C	A	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	3829438	3829438	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4117821	4117821	T	C	exonic	GLIS3	nonsynonymous	HNSC\|2\|512\|0.00391
rs768657630	chr9	4286206	4286206	C	T	exonic	GLIS3	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr9	4118617	4118617	C	T	exonic	GLIS3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs371790247	chr9	4286138	4286138	C	T	exonic	GLIS3	synonymous	PAAD\|1\|185\|0.00541
-	chr9	3829471	3829471	T	G	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs774796300	chr9	4117993	4117993	G	A	exonic	GLIS3	synonymous	LUSC\|1\|178\|0.00562
-	chr9	3879490	3879490	C	T	exonic	GLIS3	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr9	3879429	3879429	C	G	exonic	GLIS3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr9	4118443	4118443	C	T	exonic	GLIS3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs745952942	chr9	4118550	4118550	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	3828338	3828338	G	A	exonic	GLIS3	synonymous	SARC\|1\|247\|0.00405
-	chr9	3828306	3828306	G	A	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
rs757448015	chr9	4118589	4118589	G	A	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr9	4118865	4118865	C	G	exonic	GLIS3	nonsynonymous	BLCA\|1\|396\|0.00253
rs201431173	chr9	4118509	4118509	C	T	exonic	GLIS3	synonymous	PAAD\|1\|185\|0.00541
-	chr9	4118462	4118462	G	T	exonic	GLIS3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs202217571	chr9	3879441	3879441	G	A	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
rs770293029	chr9	4118551	4118551	G	A	exonic	GLIS3	synonymous	SARC\|1\|247\|0.00405
-	chr9	3932433	3932433	C	T	exonic	GLIS3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr9	3856110	3856110	C	T	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4118468	4118468	G	A	exonic	GLIS3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs765789414	chr9	4117899	4117899	C	T	exonic	GLIS3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr9	4118481	4118481	C	G	exonic	GLIS3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr9	4125772	4125772	C	A	exonic	GLIS3	nonsynonymous	UVM\|1\|80\|0.01250
-	chr9	4117803	4117803	T	A	exonic	GLIS3	stopgain	OV\|1\|469\|0.00213
-	chr9	4118183	4118183	C	T	exonic	GLIS3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
rs759183029	chr9	4117860	4117860	C	G	exonic	GLIS3	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr9	3828386	3828386	G	T	exonic	GLIS3	synonymous	UCEC\|1\|248\|0.00403
-	chr9	4118116	4118116	C	A	exonic	GLIS3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204

Disease information of GLIS3

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TF_name	Disease_name	Disease_class	Disease_semantic_type	TF_disease_source
GLIS3	Congenital Hypothyroidism	C05;C16;C19	Disease or Syndrome	GENOMICS_ENGLAND
GLIS3	Diabetes Mellitus, Insulin-Dependent	C18;C19;C20	Disease or Syndrome	CTD_human
GLIS3	Diabetes Mellitus, Non-Insulin-Dependent	C18;C19	Disease or Syndrome	CTD_human
GLIS3	Angle Closure Glaucoma	C11	Disease or Syndrome	CTD_human
GLIS3	Diabetes, Autoimmune	C18;C19;C20	Disease or Syndrome	CTD_human
GLIS3	Brittle diabetes	C18;C19;C20	Disease or Syndrome	CTD_human
GLIS3	Thyroid Agenesis	C16;C19	Congenital Abnormality	GENOMICS_ENGLAND
GLIS3	Diabetes Mellitus, Neonatal, with Congenital Hypothyroidism	C05;C16;C18;C19	Disease or Syndrome	CTD_human;ORPHANET
GLIS3	Intellectual Disability	C10;C23;F01;F03	Mental or Behavioral Dysfunction	GENOMICS_ENGLAND
GLIS3	Diabetes Mellitus, Ketosis-Prone	C18;C19;C20	Disease or Syndrome	CTD_human

Pathway associated with GLIS3

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pathway_ID	pathway_name	pathway_source	gene_number	edge_number

Go term information of GLIS3

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GO_term_name	GO_term_type	TF_name

Survival analysis of GLIS3

Methods

Overall Survival

Disease Free Survival (RFS)

Group Cutoff

Median

Quartile

Custom

Cutoff-High(%)

Hazards Ratio (HR) Calculate the hazards ratio based on Cox PH Model.

95% Confidence Interval Add the 95% CI as dotted line.

Axis Units

Expression of GLIS3

Pan cancer (TCGA) Cell line (ENCODE) In vitro differentiated cell (ENCODE) Primary cell (ENCODE) Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)