Cancer CRCdb

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_168	Cell line	Prostate	LNCaP	0.23954372623574
Sample_02_180	Cell line	Human melanoma	CJM	0.09375

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of FOXJ3

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr1	42744310	42744310	A	T	exonic	FOXJ3	synonymous	LUAD\|1\|543\|0.00184
-	chr1	42657151	42657151	G	A	exonic	FOXJ3	stopgain	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr1	42693588	42693588	G	A	exonic	FOXJ3	nonsynonymous	KICH\|1\|66\|0.01515,KIPAN\|1\|799\|0.00125
rs774386854	chr1	42657234	42657234	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|2\|368\|0.00543
-	chr1	42657000	42657000	G	C	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
rs778053981	chr1	42693625	42693625	C	A	exonic	FOXJ3	nonsynonymous	OV\|1\|469\|0.00213
-	chr1	42647652	42647652	C	T	exonic	FOXJ3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs61753350	chr1	42655054	42655054	G	A	exonic	FOXJ3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr1	42647606	42647606	G	C	exonic	FOXJ3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr1	42730816	42730816	T	A	exonic	FOXJ3	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
-	chr1	42664883	42664883	C	T	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42657002	42657002	T	C	exonic	FOXJ3	synonymous	UCEC\|1\|248\|0.00403
-	chr1	42657168	42657168	C	T	exonic	FOXJ3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs201486136	chr1	42645440	42645440	G	A	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42657097	42657097	G	A	exonic	FOXJ3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr1	42671457	42671457	C	T	exonic	FOXJ3	synonymous	OV\|1\|469\|0.00213
-	chr1	42744089	42744089	G	T	exonic	FOXJ3	nonsynonymous	PAAD\|1\|185\|0.00541
-	chr1	42645444	42645444	C	G	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr1	42654519	42654519	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42693556	42693556	G	A	exonic	FOXJ3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
-	chr1	42645382	42645382	T	A	exonic	FOXJ3	stoploss	LUAD\|1\|543\|0.00184
-	chr1	42645494	42645494	G	A	exonic	FOXJ3	nonsynonymous	HNSC\|2\|512\|0.00391
-	chr1	42693619	42693619	C	A	exonic	FOXJ3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
rs751295614	chr1	42664774	42664774	G	A	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253,UCEC\|1\|248\|0.00403
-	chr1	42744051	42744051	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42654600	42654600	C	A	splicing	FOXJ3	splicing	BRCA\|1\|982\|0.00102
-	chr1	42660660	42660660	C	G	exonic	FOXJ3	nonsynonymous	LUAD\|2\|543\|0.00368
-	chr1	42744042	42744042	T	A	exonic	FOXJ3	stopgain	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
-	chr1	42730842	42730842	G	C	exonic	FOXJ3	nonsynonymous	LUAD\|1\|543\|0.00184
rs759553757	chr1	42657144	42657144	G	A	exonic	FOXJ3	nonsynonymous	SARC\|1\|247\|0.00405
-	chr1	42657219	42657219	G	C	exonic	FOXJ3	stopgain	HNSC\|1\|512\|0.00195
-	chr1	42660589	42660589	T	G	exonic	FOXJ3	synonymous	HNSC\|1\|512\|0.00195
-	chr1	42660606	42660606	G	A	exonic	FOXJ3	nonsynonymous	UCEC\|2\|248\|0.00806
rs768511334	chr1	42660734	42660734	A	C	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
rs748388165	chr1	42744276	42744276	C	T	exonic	FOXJ3	nonsynonymous	UCS\|1\|57\|0.01754
-	chr1	42656996	42656996	-	G	exonic	FOXJ3	frameshift	LUAD\|1\|543\|0.00184
rs780372538	chr1	42645437	42645437	G	A	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253,UCEC\|1\|248\|0.00403
-	chr1	42654511	42654511	C	A	exonic	FOXJ3	nonsynonymous	LUAD\|1\|543\|0.00184
rs146466322	chr1	42664858	42664858	C	T	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs377015006	chr1	42693608	42693608	C	T	exonic	FOXJ3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs377432876	chr1	42657165	42657165	G	A	exonic	FOXJ3	nonsynonymous	OV\|1\|469\|0.00213
-	chr1	42657107	42657107	T	C	exonic	FOXJ3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42647664	42647664	G	A	exonic	FOXJ3	synonymous	SKCM\|1\|368\|0.00272
-	chr1	42693634	42693634	A	G	exonic	FOXJ3	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr1	42654508	42654508	G	T	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102,UCEC\|1\|248\|0.00403
-	chr1	42657010	42657010	C	A	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42671497	42671497	C	T	exonic	FOXJ3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr1	42647691	42647691	-	T	exonic	FOXJ3	frameshift	UCEC\|1\|248\|0.00403
rs368468296	chr1	42671479	42671479	G	A	exonic	FOXJ3	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42693624	42693624	G	T	exonic	FOXJ3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr1	42657281	42657281	G	C	exonic	FOXJ3	nonsynonymous	ACC\|1\|90\|0.01111
-	chr1	42657170	42657170	-	T	exonic	FOXJ3	frameshift	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42730811	42730811	G	C	exonic	FOXJ3	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr1	42657323	42657323	G	T	exonic	FOXJ3	synonymous	ACC\|1\|90\|0.01111
-	chr1	42693584	42693584	C	T	exonic	FOXJ3	synonymous	PAAD\|1\|185\|0.00541
-	chr1	42660696	42660696	G	A	exonic	FOXJ3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr1	42671459	42671459	G	T	exonic	FOXJ3	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr1	42657155	42657155	T	G	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr1	42657204	42657204	-	G	exonic	FOXJ3	frameshift	LUAD\|1\|543\|0.00184
-	chr1	42671493	42671493	C	G	exonic	FOXJ3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr1	42660611	42660611	G	A	exonic	FOXJ3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr1	42744050	42744050	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42647663	42647663	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42657334	42657334	G	A	exonic	FOXJ3	stopgain	BLCA\|1\|396\|0.00253
rs372943909	chr1	42657164	42657164	C	T	exonic	FOXJ3	synonymous	PRAD\|1\|499\|0.00200,UCEC\|1\|248\|0.00403
-	chr1	42776750	42776750	T	A	exonic	FOXJ3	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr1	42647591	42647591	C	T	exonic	FOXJ3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr1	42744180	42744180	C	G	exonic	FOXJ3	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr1	42647693	42647693	T	G	exonic	FOXJ3	nonsynonymous	UCEC\|2\|248\|0.00806
-	chr1	42744162	42744162	C	G	exonic	FOXJ3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr1	42693624	42693624	G	A	exonic	FOXJ3	nonsynonymous	KIPAN\|1\|799\|0.00125,KIRC\|1\|451\|0.00222
-	chr1	42654556	42654556	A	C	exonic	FOXJ3	synonymous	LUSC\|1\|178\|0.00562
-	chr1	42657008	42657008	T	G	exonic	FOXJ3	synonymous	BRCA\|1\|982\|0.00102
-	chr1	42730851	42730851	G	A	exonic	FOXJ3	stopgain	UCEC\|1\|248\|0.00403
-	chr1	42744124	42744124	T	C	exonic	FOXJ3	synonymous	LUAD\|1\|543\|0.00184
-	chr1	42730838	42730838	G	A	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr1	42660617	42660617	C	A	exonic	FOXJ3	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr1	42647655	42647655	T	G	exonic	FOXJ3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr1	42657345	42657345	G	T	exonic	FOXJ3	stopgain	UCEC\|1\|248\|0.00403
-	chr1	42671524	42671524	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42654583	42654583	C	G	exonic	FOXJ3	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr1	42654591	42654591	C	G	exonic	FOXJ3	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr1	42671457	42671457	C	A	exonic	FOXJ3	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr1	42693609	42693609	G	T	exonic	FOXJ3	nonsynonymous	TGCT\|1\|155\|0.00645
-	chr1	42655024	42655024	C	T	exonic	FOXJ3	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr1	42744223	42744223	C	T	exonic	FOXJ3	synonymous	GBM\|1\|290\|0.00345,GBMLGG\|1\|820\|0.00122
rs760840380	chr1	42657072	42657072	G	A	exonic	FOXJ3	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr1	42647697	42647697	T	C	splicing	FOXJ3	splicing	UCEC\|1\|248\|0.00403
-	chr1	42645484	42645484	G	A	exonic	FOXJ3	nonsynonymous	UCEC\|1\|248\|0.00403

TF name:	FOXJ3
TF family:	Fork_head
Ensembl gene ID:	ENSG00000198815
Ensembl protein ID:	ENSP00000393408, ENSP00000439044, ENSP00000354449, ENSP00000403060, ENSP00000361653, ENSP00000361654, ENSP00000354620
Entrez gene ID:	22887

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

TF information

TCGA somatic mutations and clinical variants of FOXJ3

Survival analysis of FOXJ3

Expression of FOXJ3