Function introduction:
In the ‘Genomic region’ analysis, CRCdb can identify the SEs by inputting the genomic regions, and then the SE-associated TF genes can be obtained in the analysis result table.
Parameter explanation:
Chromosome: Chromatin number of the entered genomic region.
Start position: Start position of the entered genomic region.
End position: End position of the entered genomic region.
Function introduction:
In the ‘Downstream gene’ analysis, users can input a gene list, CRCdb will return the TFs associated with the input genes via the TF-gene relationships in CRCs.
The input gene types including coding genes, microRNAs, lncRNAs can be supported by CRCdb.
Parameter explanation:
Gene type: Click the gene type of interest, including gene, mircoRNA and lncRNA.
Gene ID: Enter the gene of interest, but it can only enter three genes.