TcoF overview
| TcoF: | SS18L1 | |
| GeneID: | 6759 | |
| Name: | Calcium-responsive transactivator | |
| Ensembl: | ENSG00000184402 | |
| Species: | Human | |
| Class: | class 3 | |
| Family: | SS18 | |
| Disease: | 0 | |
| Go term: | 14 | |
| Pathway: | -- | |
| Hallmark: | -- | |
| Super Enhancer: |
chr20:60723289-60734110 chr20:60722578-60744151 chr20:60706956-60737312 chr20:60708464-60733304 chr20:60707926-60737490 chr20:60715847-60727130 chr20:60715644-60724173 chr20:60716051-60733003 chr20:60715690-60724360 chr20:60715797-60737734 chr20:60710682-60737545 |
|
| Enhancer: |
chr20:60697850-60699670 chr20:60758110-60760410 chr20:60879630-60881250 chr20:60962190-60962370 chr20:60736640-60737800 chr20:60930540-60931240 chr20:60735020-60736490 chr20:60645870-60647230 chr20:60576280-60578210 chr20:60878840-60879510 chr20:60881380-60881700 chr20:60920930-60921130 chr20:60987810-60987880 chr20:60706560-60708340 chr20:60712010-60712410 chr20:60637600-60639500 chr20:60727030-60727890 chr20:60734000-60734930 chr20:60793710-60794770 chr20:60862370-60863520 chr20:60863580-60864260 chr20:60878110-60878620 chr20:60882510-60882650 chr20:60883240-60883420 chr20:60883530-60883710 chr20:60883920-60884110 chr20:60884530-60884770 chr20:60884890-60885040 chr20:60885140-60885230 chr20:60885370-60885470 chr20:60885890-60885950 chr20:60886150-60886210 chr20:60886360-60886450 chr20:60886590-60886660 chr20:60891340-60891720 chr20:60891830-60891930 chr20:60892080-60892400 chr20:60892560-60892710 chr20:60894530-60894730 chr20:60894850-60895010 chr20:60928390-60930320 chr20:60934140-60934400 chr20:60962440-60962660 chr20:60966170-60966300 chr20:60966510-60967440 chr20:60832850-60834870 chr20:60882880-60883070 chr20:60931540-60932670 chr20:60979540-60981970 chr20:60962730-60962890 chr20:60962970-60963360 chr20:60628800-60628930 chr20:60708530-60709210 chr20:60829020-60829700 chr20:60881790-60882420 chr20:60895950-60897070 chr20:60897820-60898030 chr20:60898370-60898510 chr20:60898730-60898800 chr20:60898910-60899130 chr20:60899610-60899780 chr20:60906000-60906080 chr20:60906190-60906580 chr20:60899260-60899490 chr20:60871270-60872950 chr20:60770120-60770850 chr20:60533860-60534930 chr20:60712480-60713220 chr20:60713350-60713780 chr20:60897510-60897710 chr20:60572730-60573190 chr20:60578330-60578780 chr20:60710440-60711780 chr20:60740570-60741830 chr20:60897220-60897320 chr20:60963420-60963510 chr20:60963580-60963680 chr20:60970070-60971370 chr20:60987340-60987670 chr20:60987960-60988450 chr20:61294840-61296270 chr20:61297360-61297730 chr20:60935650-60937450 chr20:61000600-61002510 chr20:60499540-60501680 chr20:60999220-60999920 chr20:61000290-61000580 chr20:61027110-61028570 chr20:61035510-61037340 chr20:61059620-61061180 chr20:61064830-61065310 chr20:61065470-61065980 chr20:61173630-61175220 chr20:61175580-61176560 chr20:61187100-61188310 chr20:61195330-61197370 chr20:61277040-61277450 chr20:61354450-61355660 chr20:61358940-61360600 chr20:61387190-61388080 chr20:61397900-61398450 chr20:61399320-61401360 chr20:61402950-61405390 chr20:61428020-61428460 chr20:61428580-61429930 chr20:61436380-61436810 chr20:61448990-61449860 chr20:61449900-61450570 chr20:61450650-61451280 chr20:61451340-61452530 chr20:61453520-61453940 chr20:61453980-61455790 chr20:61455850-61456310 chr20:61461940-61463500 chr20:61463540-61464370 chr20:61464410-61466050 chr20:61468620-61470030 chr20:61470110-61470920 chr20:61491080-61491470 chr20:61491660-61492370 chr20:61545760-61547350 chr20:61655960-61658010 chr20:61012060-61014070 chr20:61062490-61063810 chr20:61192370-61194810 chr20:61406870-61408150 chr20:61456370-61457160 chr20:60859760-60861630 chr20:60841960-60842750 chr20:60856940-60859100 chr20:60861770-60862270 chr20:60700240-60700500 chr20:60579300-60580780 chr20:60867270-60867660 chr20:60922080-60923070 chr20:61318570-61319130 chr20:60940370-60942000 chr20:60333140-60333890 chr20:60360810-60362320 chr20:60527000-60527320 chr20:60561880-60562380 chr20:60589760-60591000 chr20:60591050-60591230 chr20:60595820-60597660 chr20:60617830-60619150 chr20:60619760-60620630 chr20:60625690-60627240 chr20:60634030-60635650 chr20:60635790-60636270 chr20:60678490-60680690 chr20:60699840-60700020 chr20:60739130-60739200 chr20:60739300-60739640 chr20:60769260-60770070 chr20:60771010-60771300 chr20:60778190-60779030 chr20:60789510-60790010 chr20:60824980-60825630 chr20:60844320-60845460 chr20:60864390-60865260 chr20:60900150-60900360 chr20:60912780-60912850 chr20:60913000-60913070 chr20:60913210-60913280 chr20:60913430-60913520 chr20:60919640-60920260 chr20:60967550-60967970 chr20:60968080-60968490 chr20:60968660-60969210 chr20:60969320-60969990 chr20:60971460-60971570 chr20:60971650-60973120 chr20:60993520-60994640 chr20:60994820-60995100 chr20:60995530-60996800 chr20:61032920-61035060 chr20:61086050-61088170 chr20:61154670-61157120 chr20:61165460-61167460 chr20:61169960-61171290 chr20:61286740-61287710 chr20:61288600-61290020 chr20:61290120-61291760 chr20:61296850-61297210 chr20:61302970-61303100 chr20:61448500-61448910 chr20:61452560-61452850 chr20:61457220-61457550 chr20:61457600-61458110 chr20:61467300-61467530 chr20:61467690-61467820 chr20:61467880-61468430 chr20:61487710-61488740 chr20:61522510-61523330 chr20:61526520-61527580 chr20:61608190-61610580 chr20:61645570-61647270 chr20:61660630-61662290 chr20:61662440-61664360 chr20:61673380-61675180 chr20:61695700-61697040 chr20:61699820-61701930 chr20:60751600-60753020 chr20:60783560-60785430 chr20:60849200-60850330 chr20:60866120-60866750 chr20:60913660-60916110 chr20:61292530-61294370 chr20:61308170-61310500 chr20:61488990-61490710 chr20:61718250-61720460 |
|
| Promoter: |
chr20:60718825-60757570 |
ChIP-seq based regulatory details of SS18L1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of SS18L1
Upstream regulatory details of SS18L1
Protein-protein interaction of SS18L1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| SS18L1 | RFX6 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| SS18L1 | CREBBP | Affinity Capture-Western | 14716005 | 9606 | 9606 | BIOGRID |
| SS18L1 | EP300 | Affinity Capture-Western | 14716005 | 9606 | 9606 | BIOGRID |
| SS18L1 | CREBBP | Reconstituted Complex | 14716005 | 9606 | 9606 | BIOGRID |
| SS18L1 | SMARCA4 | Affinity Capture-Western | 19081374 | 9606 | 9606 | BIOGRID |
| SS18L1 | AATF | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | RLIM | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | TAF9B | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | GATAD1 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | PCGF6 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | MED30 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | ANKRD22 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| SS18L1 | SS18L1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| SS18L1 | MAPK1IP1L | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| SS18L1 | SNRPB | Two-hybrid | 21516116 | 9606 | 9606 | BIOGRID |
| SS18L1 | RFX6 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| SS18L1 | BCL7A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SS18L1 | BRD7 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SS18L1 | PBRM1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of SS18L1
TCGA cancer survival map of SS18L1
Expression of SS18L1
Disease information of SS18L1