TcoF overview
| TcoF: | BRF2 | |
| GeneID: | 79697 | |
| Name: | Transcription factor IIIB 50 kDa subunit | |
| Ensembl: | ENSG00000104221 | |
| Species: | Human | |
| Class: | class 3 | |
| Family: | GTF | |
| Disease: | 0 | |
| Go term: | 10 | |
| Pathway: | 3 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr8:37736520-37741761 chr8:37718566-37725766 chr8:37677168-37697148 chr8:37637083-37756232 chr8:37699736-37758582 chr8:37635232-37755993 chr8:37633339-37730372 chr8:37698756-37732158 chr8:37677649-37702761 |
|
| Enhancer: |
chr8:37553740-37554660 chr8:37691360-37691480 chr8:37691650-37692690 chr8:37693290-37695240 chr8:37695460-37696470 chr8:37696600-37697010 chr8:38105350-38107220 chr8:38176450-38178580 chr8:37599940-37601870 chr8:37594530-37594890 chr8:37706170-37707140 chr8:37728050-37728790 chr8:37630410-37632850 chr8:37730700-37732030 chr8:37821760-37822780 chr8:38089660-38090500 chr8:37577760-37579220 chr8:37692920-37693070 chr8:37377820-37378820 chr8:37620280-37622430 chr8:37655050-37656970 chr8:37687530-37688220 chr8:37688440-37688940 chr8:37698370-37698600 chr8:38006270-38008270 chr8:37430850-37432820 chr8:38103820-38105230 chr8:37702730-37704370 chr8:37697140-37697630 chr8:37697780-37698270 chr8:37689110-37689520 chr8:37454490-37455020 chr8:37458510-37458950 chr8:37725880-37727930 chr8:38023200-38025100 chr8:37371510-37373920 chr8:37273820-37274820 chr8:37349760-37350950 chr8:37494570-37496850 chr8:38039250-38039880 chr8:37610560-37610960 chr8:37611050-37611410 chr8:37691020-37691200 chr8:37785710-37787040 chr8:37796400-37797430 chr8:38070820-38072200 chr8:38125980-38126390 chr8:38126510-38126640 chr8:38125480-38125880 chr8:37996390-37996480 chr8:38065280-38066530 chr8:38066790-38067520 chr8:38134020-38135820 chr8:37392440-37393800 chr8:37582480-37584670 chr8:37584810-37586910 chr8:37278160-37278850 chr8:37940610-37941550 chr8:37946280-37948340 chr8:37948510-37950450 chr8:37963660-37963890 chr8:37418750-37420900 chr8:37440580-37442810 chr8:37487570-37488300 chr8:37488550-37490120 chr8:37336100-37338120 chr8:37938510-37940480 chr8:37258990-37261180 chr8:37642810-37644510 chr8:37447530-37449740 chr8:37343860-37346220 chr8:37687160-37687360 chr8:37732840-37733290 |
|
| Promoter: |
chr8:37700786-37707379 |
ChIP-seq based regulatory details of BRF2
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_20474 | BRF2 | cell line | HeLa | GSM509050 | Uterus | Cistrome |
| TcoF_00_20033 | BRF2 | cell line | HeLa-S3 | GSM935435 | Uterus | Cistrome |
| TcoF_00_20054 | BRF2 | cell line | K562 | GSM935490 | Bone Marrow | Cistrome |
| TcoF_00_40417 | BRF2 | cell line | K-562 | GSM935490 | Bone Marrow | ReMap |
| TcoF_00_20632 | BRF2 | cell line | IMR90 | GSM938408 | Lung | Cistrome |
| TcoF_00_40709 | BRF2 | cell line | IMR-90_TERT | GSM938408 | Lung | ReMap |
Downstream target genes of BRF2
Upstream regulatory details of BRF2
Protein-protein interaction of BRF2
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| BRF2 | XPO7 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | DNAAF5 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | IPO4 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | COPG1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | ATAD3A | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | XPO4 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | MARS | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | AIFM1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | GCN1L1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | GEMIN4 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | OTUD4 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | TNPO3 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | FANCI | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | NOC2L | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | TMEM33 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | DPM1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | ABCD3 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | SLC3A2 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | PTPLAD1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | NUP93 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | XPO6 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | SMPD4 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | MYO1B | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | RNF219 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | SMAP1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | SF3B1 | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| BRF2 | TBP | Reconstituted Complex | 11564744 | 9606 | 9606 | BIOGRID |
| BRF2 | NCAM1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| BRF2 | JUP | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
Annotation of BRF2
TCGA cancer survival map of BRF2
Expression of BRF2
Disease information of BRF2