TcoF overview
| TcoF: | BRF1 | |
| GeneID: | 695 | |
| Name: | Transcription factor IIIB 90 kDa subunit | |
| Ensembl: | ENSG00000185024 | |
| Species: | Human | |
| Class: | class 3 | |
| Family: | GTF | |
| Disease: | 4 | |
| Go term: | 14 | |
| Pathway: | 4 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr14:105779362-105808556 chr14:105777800-105803638 chr14:105777943-105809698 chr14:105790100-105810763 chr14:105650530-105688458 chr14:105671103-105689545 chr14:105658881-105681495 chr14:105715389-105819104 |
|
| Enhancer: |
chr14:105560550-105561660 chr14:105946510-105948260 chr14:105957860-105957950 chr14:105958040-105958440 chr14:105992990-105995050 chr14:105830570-105831010 chr14:105781380-105781650 chr14:105864970-105865630 chr14:105877830-105877990 chr14:105880200-105881180 chr14:105856340-105857540 chr14:105818800-105820000 chr14:105943940-105944600 chr14:105370460-105371500 chr14:105634440-105634690 chr14:105791640-105792290 chr14:105794650-105795300 chr14:105865830-105867680 chr14:105906300-105907230 chr14:105932920-105933040 chr14:105933070-105934280 chr14:106114140-106115990 chr14:105931200-105931430 chr14:105931520-105932760 chr14:105453190-105455270 chr14:105568670-105569130 chr14:105691100-105691830 chr14:105738420-105739050 chr14:105739230-105739880 chr14:105772330-105772550 chr14:105811600-105812950 chr14:105813350-105814820 chr14:105850290-105850680 chr14:105850800-105851210 chr14:105851320-105852020 chr14:106106890-106107320 chr14:106130440-106131030 chr14:106131070-106131450 chr14:105858100-105858950 chr14:105859180-105859550 chr14:105958650-105958910 chr14:105740840-105742430 chr14:105746590-105749050 chr14:105817980-105818710 chr14:105720740-105722520 chr14:105773100-105774440 chr14:105814920-105815820 chr14:105959070-105960170 chr14:105963780-105964130 chr14:105964320-105964950 chr14:105645580-105647460 chr14:105659160-105660130 chr14:105670530-105672800 chr14:105803710-105805410 chr14:105831060-105831860 chr14:105876570-105877700 chr14:105806660-105808900 chr14:105435990-105437830 chr14:105643110-105643290 chr14:105643360-105644020 chr14:105644070-105644860 chr14:105686470-105687980 chr14:105484100-105485130 chr14:105498420-105500540 chr14:105563630-105564420 chr14:105965590-105967400 chr14:105627120-105629140 chr14:105142000-105144030 chr14:105346760-105349060 chr14:105485200-105487340 chr14:105584760-105586760 chr14:105843540-105844970 chr14:105944700-105944780 chr14:105944840-105945060 chr14:105749560-105751350 chr14:105945560-105945770 chr14:105945830-105945920 chr14:105360720-105360870 chr14:105470150-105471640 chr14:105457960-105459280 chr14:105681450-105682020 chr14:105682950-105683880 chr14:105800160-105801490 chr14:105802160-105802910 chr14:105802930-105803640 chr14:105854720-105856290 chr14:106048900-106049780 chr14:105677630-105678440 chr14:106037520-106038340 chr14:105723370-105724540 chr14:105809180-105810120 chr14:105726980-105729240 chr14:105615660-105616100 chr14:105677370-105677450 chr14:105684470-105685330 chr14:105685640-105686370 chr14:105694820-105695150 chr14:105695250-105695400 chr14:105929240-105929520 chr14:105929600-105929820 chr14:105478270-105480040 |
|
| Promoter: |
chr14:105675623-105781926 |
ChIP-seq based regulatory details of BRF1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_20627 | BRF1 | cell line | IMR90 | GSM454597 | Lung | Cistrome |
| TcoF_00_30082 | BRF1 | cell line | HeLa | GSM501711 | Uterus | ChIP-Atlas |
| TcoF_00_20473 | BRF1 | cell line | HeLa | GSM509049 | Uterus | Cistrome |
| TcoF_00_20035 | BRF1 | cell line | HeLa-S3 | GSM935582 | Uterus | Cistrome |
| TcoF_00_40415 | BRF1 | cell line | HeLa-S3 | GSM935582 | Uterus | ReMap |
| TcoF_00_20056 | BRF1 | cell line | K562 | GSM935595 | Bone Marrow | Cistrome |
| TcoF_00_40420 | BRF1 | cell line | K-562 | GSM935595 | Bone Marrow | ReMap |
Downstream target genes of BRF1
Upstream regulatory details of BRF1
Protein-protein interaction of BRF1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| BRF1 | GTF3C5 | Affinity Capture-Western | 10373544 | 9606 | 9606 | BIOGRID |
| BRF1 | PCBD2 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
| BRF1 | TBP | Affinity Capture-Western | 11809839 | 9606 | 9606 | BIOGRID |
| BRF1 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| BRF1 | TBP | Affinity Capture-Western | 18391023 | 9606 | 9606 | BIOGRID |
| BRF1 | DBN1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | UBC | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | POTEI | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PPP1R9B | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PCBP2 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | LUZP1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | RAI14 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | HNRNPU | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | AP2A1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | FAM83H | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PPP1R12A | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | KRT17 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | ACTN4 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | NCL | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | ALPP | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | HSPH1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | FLII | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | RLIM | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | SND1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | NOLC1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | EFTUD2 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PRPF4 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PSMC1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PARP1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | FLNB | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | SUMO2 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | NOP2 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | USP28 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | SSFA2 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | ALPI | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | TRIM27 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | HIST1H1C | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | SERBP1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | MISP | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | DCD | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | HSP90AA1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | S100A8 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PPFIA1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PTBP1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | C4A | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | PXDN | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | HSPA4 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | A2M | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | ACLY | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | IGHG1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | LRRFIP1 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | ZNF649 | Affinity Capture-MS | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | RLIM | Affinity Capture-Western | 30413534 | 9606 | 9606 | BIOGRID |
| BRF1 | TBP | Affinity Capture-Western | 30413534 | 9606 | 9606 | BIOGRID |
Annotation of BRF1
TCGA cancer survival map of BRF1
Expression of BRF1
Disease information of BRF1