Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_168 | Cell line | Prostate | LNCaP | 0.076045627376426 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr12 | 101876667 | 101876667 | - | G | exonic | SPIC | unknown | KIPAN|2|799|0.00250,KIRC|2|451|0.00443,LUAD|2|543|0.00368 |
- | chr12 | 101873438 | 101873438 | C | G | exonic | SPIC | unknown | LUSC|1|178|0.00562 |
- | chr12 | 101880208 | 101880208 | A | G | exonic | SPIC | unknown | BRCA|1|982|0.00102 |
- | chr12 | 101876641 | 101876641 | G | T | exonic | SPIC | unknown | LUSC|1|178|0.00562 |
rs778706697 | chr12 | 101876615 | 101876615 | C | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880381 | 101880381 | C | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
rs759289491 | chr12 | 101880330 | 101880330 | C | T | exonic | SPIC | unknown | GBM|1|290|0.00345,GBMLGG|1|820|0.00122,STAD|1|395|0.00253,STES|1|395|0.00253 |
rs753296739 | chr12 | 101876674 | 101876674 | A | G | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880335 | 101880335 | G | C | exonic | SPIC | unknown | HNSC|1|512|0.00195 |
- | chr12 | 101880233 | 101880233 | - | A | exonic | SPIC | unknown | BLCA|1|396|0.00253,COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
rs745964388 | chr12 | 101880267 | 101880267 | G | A | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101876668 | 101876668 | G | - | exonic | SPIC | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr12 | 101876591 | 101876591 | T | G | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101880156 | 101880156 | C | T | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101873448 | 101873448 | T | C | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101880295 | 101880295 | A | G | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
rs746088939 | chr12 | 101880137 | 101880137 | G | A | exonic | SPIC | unknown | CESC|1|194|0.00515,SKCM|1|368|0.00272 |
- | chr12 | 101876615 | 101876615 | C | G | exonic | SPIC | unknown | BRCA|1|982|0.00102 |
- | chr12 | 101880274 | 101880274 | A | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
rs761616183 | chr12 | 101871356 | 101871356 | G | A | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101871392 | 101871392 | G | C | exonic | SPIC | unknown | BRCA|1|982|0.00102 |
- | chr12 | 101880268 | 101880268 | A | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101876581 | 101876581 | G | A | exonic | SPIC | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr12 | 101880424 | 101880424 | G | A | exonic | SPIC | unknown | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr12 | 101873459 | 101873459 | G | T | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
rs756144861 | chr12 | 101880256 | 101880256 | G | A | exonic | SPIC | unknown | CESC|1|194|0.00515 |
- | chr12 | 101880255 | 101880255 | C | A | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101873414 | 101873414 | C | T | exonic | SPIC | unknown | HNSC|1|512|0.00195,UCEC|1|248|0.00403 |
- | chr12 | 101871414 | 101871414 | C | A | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101876625 | 101876625 | T | G | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101880531 | 101880531 | A | G | exonic | SPIC | unknown | GBM|1|290|0.00345,GBMLGG|1|820|0.00122 |
- | chr12 | 101880201 | 101880201 | A | T | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101880376 | 101880376 | C | T | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101880389 | 101880389 | C | T | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101876620 | 101876620 | G | T | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101880233 | 101880233 | C | A | exonic | SPIC | unknown | KIPAN|1|799|0.00125,KIRC|1|451|0.00222 |
- | chr12 | 101880157 | 101880157 | G | A | exonic | SPIC | unknown | UCEC|1|248|0.00403 |
- | chr12 | 101880259 | 101880259 | C | A | exonic | SPIC | unknown | PCPG|1|184|0.00543 |
- | chr12 | 101880362 | 101880362 | G | - | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
- | chr12 | 101876581 | 101876581 | G | - | exonic | SPIC | unknown | LUAD|1|543|0.00184 |
rs539976810 | chr12 | 101880371 | 101880371 | C | T | exonic | SPIC | unknown | BLCA|1|396|0.00253 |
- | chr12 | 101873423 | 101873423 | A | G | exonic | SPIC | unknown | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr12 | 101873373 | 101873373 | C | A | exonic | SPIC | unknown | UCS|1|57|0.01754 |
- | chr12 | 101880303 | 101880303 | G | A | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880435 | 101880435 | C | A | exonic | SPIC | unknown | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
rs574189804 | chr12 | 101880268 | 101880268 | A | G | exonic | SPIC | unknown | SARC|1|247|0.00405 |
- | chr12 | 101870684 | 101870684 | T | A | upstream | SPIC | unknown | LUSC|1|178|0.00562 |
- | chr12 | 101880291 | 101880291 | C | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880332 | 101880332 | G | A | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880426 | 101880426 | G | A | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
- | chr12 | 101880174 | 101880174 | G | A | exonic | SPIC | unknown | UCEC|2|248|0.00806 |
rs554489172 | chr12 | 101876611 | 101876611 | A | G | exonic | SPIC | unknown | PRAD|1|499|0.00200 |
- | chr12 | 101873415 | 101873415 | C | T | exonic | SPIC | unknown | HNSC|1|512|0.00195 |
- | chr12 | 101876613 | 101876613 | C | T | exonic | SPIC | unknown | SKCM|1|368|0.00272 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_CHROMOSOME_SEGREGATION | BP | SPIC |
GO_REGULATION_OF_CENTRIOLE_REPLICATION | BP | SPIC |
GO_MITOTIC_SPINDLE_ASSEMBLY | BP | SPIC |
GO_ORGANELLE_FISSION | BP | SPIC |
GO_REGULATION_OF_CENTROSOME_CYCLE | BP | SPIC |
GO_REGULATION_OF_CENTROSOME_DUPLICATION | BP | SPIC |
GO_BLASTOCYST_DEVELOPMENT | BP | SPIC |
GO_SPINDLE_ASSEMBLY | BP | SPIC |
GO_METAPHASE_PLATE_CONGRESSION | BP | SPIC |
GO_MICROTUBULE_ORGANIZING_CENTER | CC | SPIC |