Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_228 | Cell line | Oesophagus | KYSE510 | 0.42590866728798 |
Sample_02_317 | Cell line | Neuroblastoma | GICAN | 0.081081081081081 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_02_228 | Oesophagus | Cell line | KYSE510 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr17 | 7492754 | 7492754 | T | C | exonic | SOX15 | nonsynonymous | KIPAN|1|799|0.00125,KIRP|1|282|0.00355 |
- | chr17 | 7492956 | 7492956 | G | A | exonic | SOX15 | synonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr17 | 7492776 | 7492776 | C | A | exonic | SOX15 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr17 | 7491725 | 7491725 | C | G | exonic | SOX15 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 7492785 | 7492785 | C | T | exonic | SOX15 | synonymous | BLCA|1|396|0.00253 |
- | chr17 | 7491727 | 7491727 | G | A | exonic | SOX15 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr17 | 7491864 | 7491864 | G | T | exonic | SOX15 | synonymous | CESC|1|194|0.00515 |
rs761527672 | chr17 | 7492706 | 7492706 | G | A | exonic | SOX15 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr17 | 7492611 | 7492611 | G | T | exonic | SOX15 | synonymous | ACC|1|90|0.01111 |
- | chr17 | 7491817 | 7491817 | T | A | exonic | SOX15 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr17 | 7492597 | 7492597 | C | A | exonic | SOX15 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr17 | 7492683 | 7492683 | C | - | exonic | SOX15 | frameshift | LIHC|1|373|0.00268 |
- | chr17 | 7492805 | 7492805 | G | A | exonic | SOX15 | nonsynonymous | STAD|2|395|0.00506,STES|2|395|0.00506 |
- | chr17 | 7492686 | 7492686 | C | T | exonic | SOX15 | synonymous | DLBC|1|48|0.02083 |
- | chr17 | 7492582 | 7492582 | C | T | exonic | SOX15 | nonsynonymous | CESC|1|194|0.00515 |
- | chr17 | 7491739 | 7491739 | T | G | exonic | SOX15 | nonsynonymous | BRCA|1|982|0.00102 |
- | chr17 | 7492582 | 7492582 | C | G | exonic | SOX15 | nonsynonymous | CESC|1|194|0.00515 |
- | chr17 | 7491760 | 7491760 | G | - | exonic | SOX15 | frameshift | BRCA|1|982|0.00102 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|---|---|---|---|
SOX15 | Polycystic Ovary Syndrome | C04;C13;C19 | Disease or Syndrome | CTD_human |
SOX15 | Sclerocystic Ovaries | C04;C13;C19 | Disease or Syndrome | CTD_human |
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_SKELETAL_MUSCLE_TISSUE_REGENERATION | BP | SOX15 |
GO_REGULATION_OF_WOUND_HEALING | BP | SOX15 |
GO_REGULATION_OF_MUSCLE_TISSUE_DEVELOPMENT | BP | SOX15 |
GO_REGULATION_OF_RESPONSE_TO_EXTERNAL_STIMULUS | BP | SOX15 |
GO_MUSCLE_STRUCTURE_DEVELOPMENT | BP | SOX15 |
GO_MYOBLAST_DIFFERENTIATION | BP | SOX15 |
GO_TISSUE_REGENERATION | BP | SOX15 |
GO_POSITIVE_REGULATION_OF_WOUND_HEALING | BP | SOX15 |
GO_NEGATIVE_REGULATION_OF_MUSCLE_TISSUE_DEVELOPMENT | BP | SOX15 |
GO_REGULATION_OF_MYOBLAST_PROLIFERATION | BP | SOX15 |
GO_TISSUE_DEVELOPMENT | BP | SOX15 |