TF information

TF name: PPARA
TF family: THR-like
Ensembl gene ID: ENSG00000186951
Ensembl protein ID: ENSP00000385523, ENSP00000414752, ENSP00000262735, ENSP00000385246
Entrez gene ID: 5465
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of PPARA in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_02_354Cell lineColonColo2050.12012012012012

PPARA distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name

PPARA distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with PPARA
Download

Mutation of PPARA
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of PPARA

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr224659443046594430CTexonicPPARAsynonymous SKCM|1|368|0.00272
-chr224661421546614215GTexonicPPARAnonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr224661121946611219GTexonicPPARAstopgain STAD|1|395|0.00253,STES|1|395|0.00253
-chr224662808746628087GAexonicPPARAsynonymous SKCM|1|368|0.00272
-chr224661422546614225CTexonicPPARAsynonymous SKCM|1|368|0.00272
-chr224661418646614186CAexonicPPARAsynonymous UCEC|1|248|0.00403
-chr224661113446611134CTexonicPPARAsynonymous LUSC|1|178|0.00562
-chr224661107446611074GAexonicPPARAsynonymous UCEC|1|248|0.00403
-chr224663103246631032CTexonicPPARAnonsynonymous CESC|1|194|0.00515,SKCM|1|368|0.00272
rs766483864chr224661108846611088CTexonicPPARAnonsynonymous SKCM|2|368|0.00543
rs200210427chr224662804946628049AGexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr224662775646627756CTexonicPPARAnonsynonymous LUAD|2|543|0.00368
-chr224662810246628102CAexonicPPARAsynonymous COADREAD|1|489|0.00204,READ|1|122|0.00820
-chr224659445346594453GCexonicPPARAnonsynonymous OV|1|469|0.00213
-chr224661571446615714CTexonicPPARAnonsynonymous SKCM|2|368|0.00543
rs762274909chr224661107046611070AGexonicPPARAnonsynonymous SARC|1|247|0.00405
-chr224662806846628068ACexonicPPARAnonsynonymous BRCA|1|982|0.00102
-chr224662793446627934CTexonicPPARAsynonymous UCS|1|57|0.01754
rs1042311chr224662778046627780CTexonicPPARAnonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr224661573346615733GTexonicPPARAnonsynonymous BRCA|1|982|0.00102
-chr224661425346614253TCexonicPPARAnonsynonymous PAAD|1|185|0.00541
-chr224661121346611213GTexonicPPARAnonsynonymous LIHC|1|373|0.00268
-chr224661419046614190CGexonicPPARAnonsynonymous LIHC|1|373|0.00268
rs749814012chr224661117746611177GAexonicPPARAnonsynonymous PRAD|2|499|0.00401
-chr224661119846611198CTexonicPPARAnonsynonymous BLCA|1|396|0.00253
-chr224662770946627709GTexonicPPARAnonsynonymous LUSC|1|178|0.00562
-chr224662796146627961CTexonicPPARAsynonymous UCEC|1|248|0.00403
-chr224663104446631044CAexonicPPARAnonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr224659432946594329G-exonicPPARAframeshift LUAD|1|543|0.00184
-chr224659440946594409GTexonicPPARAnonsynonymous HNSC|1|512|0.00195
rs369963518chr224659447846594478GCexonicPPARAsynonymous SARC|1|247|0.00405
-chr224662799546627995AGexonicPPARAnonsynonymous ACC|1|90|0.01111
-chr224661416546614165CTexonicPPARAsynonymous SKCM|1|368|0.00272
-chr224662812346628123CAexonicPPARAsynonymous BLCA|1|396|0.00253
-chr224659433846594338GTexonicPPARAstopgain CHOL|1|35|0.02857
-chr224659440446594404GAexonicPPARAnonsynonymous GBM|1|290|0.00345,GBMLGG|1|820|0.00122
-chr224662796746627967GTexonicPPARAnonsynonymous BRCA|1|982|0.00102
-chr224662813146628131GAexonicPPARAnonsynonymous UCEC|1|248|0.00403
-chr224661114346611143CTexonicPPARAsynonymous LUAD|1|543|0.00184
-chr224662800746628007CTexonicPPARAsynonymous SKCM|1|368|0.00272
rs559996245chr224661112946611129GAexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs779053935chr224661428246614282CTexonicPPARAsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs774377701chr224661108946611089GAexonicPPARAsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs549236046chr224661418246614182GAexonicPPARAnonsynonymous HNSC|1|512|0.00195,STAD|1|395|0.00253,STES|1|395|0.00253
rs146427416chr224661429746614297CTexonicPPARAsynonymous UCEC|1|248|0.00403
rs371950309chr224662778946627789GAexonicPPARAnonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
rs199894775chr224662784746627847CTexonicPPARAsynonymous SKCM|1|368|0.00272,UCEC|1|248|0.00403
rs561580529chr224659448646594486CTexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr224662791146627911GAexonicPPARAnonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr224661428346614283GAexonicPPARAnonsynonymous PRAD|1|499|0.00200
-chr224661585446615854CTexonicPPARAsynonymous SKCM|2|368|0.00543
-chr224662792546627925CTexonicPPARAsynonymous PAAD|1|185|0.00541
-chr224661418646614186CGexonicPPARAsynonymous BLCA|1|396|0.00253
rs747248946chr224663104946631049CTexonicPPARAsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs772477466chr224662812146628121AGexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr224663106246631062-AexonicPPARAframeshift LUAD|1|543|0.00184
-chr224661571146615711ACexonicPPARAnonsynonymous LIHC|1|373|0.00268
rs781580066chr224662793546627935AGexonicPPARAnonsynonymous THCA|1|504|0.00198
-chr224659446246594462CTexonicPPARAnonsynonymous SKCM|1|368|0.00272
-chr224661426546614265CTexonicPPARAnonsynonymous SKCM|1|368|0.00272
rs764930526chr224661572346615723CTexonicPPARAstopgain UVM|1|80|0.01250
-chr224663123646631237CT-exonicPPARAframeshift BRCA|1|982|0.00102
-chr224661417346614173GAexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs571736420chr224661571046615710GAexonicPPARAsynonymous LUAD|1|543|0.00184
-chr224661578446615784T-exonicPPARAframeshift COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs371347006chr224659446546594465GAexonicPPARAnonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr224661429846614298GTexonicPPARAnonsynonymous ESCA|1|185|0.00541
rs761216470chr224659447746594477CTexonicPPARAnonsynonymous SKCM|1|368|0.00272
rs774720320chr224662786846627868CTexonicPPARAsynonymous BLCA|1|396|0.00253
-chr224659448146594481CTexonicPPARAsynonymous LIHC|1|373|0.00268
-chr224662805546628055GCexonicPPARAnonsynonymous SKCM|1|368|0.00272
rs766370613chr224661421146614211CTexonicPPARAnonsynonymous SKCM|1|368|0.00272
-chr224661119246611192GTexonicPPARAnonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
rs751185249chr224662802746628027GAexonicPPARAsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr224662805046628050AGexonicPPARAnonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr224661116246611162GAexonicPPARAnonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253

Disease information of PPARA
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
PPARA Alloxan Diabetes C18;C19 Experimental Model of Disease CTD_human
PPARA Malignant Neoplasms C04 Neoplastic Process CTD_human
PPARA Carcinoma C04 Neoplastic Process CTD_human
PPARA Crohn Disease C06 Disease or Syndrome CTD_human
PPARA Dermatitis, Atopic C16;C17;C20 Disease or Syndrome CTD_human
PPARA Diabetes Mellitus, Experimental C18;C19 Experimental Model of Disease CTD_human
PPARA Diabetes Mellitus, Non-Insulin-Dependent C18;C19 Disease or Syndrome CTD_human
PPARA Drug toxicity C25 Injury or Poisoning CTD_human
PPARA Experimental Autoimmune Encephalomyelitis C10;C20 Experimental Model of Disease CTD_human
PPARA Fatty Liver C06 Disease or Syndrome CTD_human
PPARA Fatty Liver, Alcoholic C06;C25 Disease or Syndrome CTD_human
PPARA Cardiomegaly C14;C23 Finding CTD_human
PPARA Hepatitis, Toxic C06;C25 Injury or Poisoning CTD_human
PPARA Hepatomegaly C06;C23 Finding CTD_human
PPARA Hyperlipidemia C18 Disease or Syndrome CTD_human
PPARA Hyperlipoproteinemias C18 Disease or Syndrome CTD_human
PPARA Hypertensive disease C14 Disease or Syndrome CTD_human
PPARA Hypertriglyceridemia C18 Disease or Syndrome CTD_human
PPARA Hypoglycemia C18 Disease or Syndrome CTD_human
PPARA Inflammation C23 Pathologic Function CTD_human
PPARA Insulin Resistance C18 Pathologic Function CTD_human
PPARA Kidney Diseases C12;C13 Disease or Syndrome CTD_human
PPARA Kidney Failure, Chronic C12;C13 Disease or Syndrome CTD_human
PPARA Acute Kidney Tubular Necrosis C12;C13 Disease or Syndrome CTD_human
PPARA Liver neoplasms C04;C06 Neoplastic Process CTD_human
PPARA Animal Mammary Neoplasms C04;C22 Neoplastic Process CTD_human
PPARA Mammary Neoplasms, Experimental C04 Experimental Model of Disease; Neoplastic Process CTD_human
PPARA Myopathy C05;C10 Disease or Syndrome CTD_human
PPARA Myocardial Reperfusion Injury C14;C23 Pathologic Function CTD_human
PPARA Neoplasms C04 Neoplastic Process CTD_human
PPARA Obesity C18;C23 Disease or Syndrome CTD_human
PPARA Prostatic Neoplasms C04;C12 Neoplastic Process CTD_human
PPARA Proteinuria C12;C13;C23 Finding CTD_human
PPARA Reperfusion Injury C14;C23 Injury or Poisoning CTD_human
PPARA Schizophrenia F03 Mental or Behavioral Dysfunction PSYGENET
PPARA Streptozotocin Diabetes C18;C19 Experimental Model of Disease CTD_human
PPARA Adverse reaction to drug C25 Pathologic Function CTD_human
PPARA Eczema, Infantile C16;C17;C20 Disease or Syndrome CTD_human
PPARA Benign Neoplasm C04 Neoplastic Process CTD_human
PPARA Crohn's disease of large bowel C06 Disease or Syndrome CTD_human
PPARA Anaplastic carcinoma C04 Neoplastic Process CTD_human
PPARA Carcinoma, Spindle-Cell C04 Neoplastic Process CTD_human
PPARA Undifferentiated carcinoma C04 Neoplastic Process CTD_human
PPARA Carcinomatosis C04 Neoplastic Process CTD_human
PPARA Dyslipidemias C18 Disease or Syndrome CTD_human
PPARA Crohn's disease of the ileum C06 Disease or Syndrome CTD_human
PPARA Fasting Hypoglycemia C18 Disease or Syndrome CTD_human
PPARA Reactive hypoglycemia C18 Disease or Syndrome CTD_human
PPARA Malignant neoplasm of liver C04;C06 Neoplastic Process CTD_human
PPARA Malignant neoplasm of prostate C04;C12 Neoplastic Process CTD_human
PPARA Non-alcoholic Fatty Liver Disease C06 Disease or Syndrome CTD_human
PPARA Dyslipoproteinemias C18 Pathologic Function CTD_human
PPARA Regional enteritis C06 Disease or Syndrome CTD_human
PPARA Drug-Induced Liver Disease C06;C25 Disease or Syndrome CTD_human
PPARA Insulin Sensitivity C18 Pathologic Function CTD_human
PPARA IIeocolitis C06 Disease or Syndrome CTD_human
PPARA Mammary Carcinoma, Animal C04;C22 Neoplastic Process CTD_human
PPARA Hepatitis, Drug-Induced C06;C25 Disease or Syndrome CTD_human
PPARA Cardiac Hypertrophy C14;C23 Pathologic Function CTD_human
PPARA Lipidemias C18 Finding CTD_human
PPARA Steatohepatitis C06 Disease or Syndrome CTD_human
PPARA Alcoholic Steatohepatitis C06;C25 Disease or Syndrome CTD_human
PPARA Abdominal obesity metabolic syndrome C18 Disease or Syndrome CTD_human
PPARA Nonalcoholic Steatohepatitis C06 Disease or Syndrome CTD_human
PPARA Drug-Induced Acute Liver Injury C06;C25 Disease or Syndrome CTD_human
PPARA Chemical and Drug Induced Liver Injury C06;C25 Disease or Syndrome CTD_human
PPARA Chemically-Induced Liver Toxicity C06;C25 Disease or Syndrome CTD_human

Pathway associated with PPARA
pathway_ID pathway_name pathway_source gene_number edge_number
pathway0000069 Activation of gene expression by SREBF (SREBP) reactome 42 266
pathway0000316 BMAL1:CLOCK,NPAS2 activates circadian gene expression reactome 42 282
pathway0000430 Circadian Clock reactome 49 389
pathway0001534 Nuclear Receptor transcription pathway reactome 51 284
pathway0001846 Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha) reactome 20 122
pathway0001940 RORA activates gene expression reactome 27 204
pathway0001947 RXR and RAR heterodimerization with other nuclear receptor pid 26 164
pathway0002299 Transcriptional activation of mitochondrial biogenesis reactome 43 230
pathway0002460 YAP1- and WWTR1 (TAZ)-stimulated gene expression reactome 29 144
pathway0002857 Hs_SREBF_and_miR33_in_cholesterol_and_lipid_homeostasis_WP2011_89947 wikipathways 6 12

Go term information of PPARA
GO_term_name GO_term_type TF_name
GO_NEGATIVE_REGULATION_OF_TRANSCRIPTION_REGULATORY_REGION_DNA_BINDING BP PPARA
GO_REGULATION_OF_LIPID_STORAGE BP PPARA
GO_SINGLE_ORGANISM_BEHAVIOR BP PPARA
GO_CELLULAR_RESPONSE_TO_LIPID BP PPARA
GO_CIRCADIAN_REGULATION_OF_GENE_EXPRESSION BP PPARA
GO_TOOTH_MINERALIZATION BP PPARA
GO_REGULATION_OF_NUCLEOTIDE_CATABOLIC_PROCESS BP PPARA
GO_POSITIVE_REGULATION_OF_CARBOHYDRATE_METABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_FATTY_ACID_METABOLIC_PROCESS BP PPARA
GO_WOUND_HEALING BP PPARA
GO_REGULATION_OF_SEQUESTERING_OF_TRIGLYCERIDE BP PPARA
GO_NEGATIVE_REGULATION_OF_DNA_BINDING BP PPARA
GO_REGULATION_OF_MACROPHAGE_DERIVED_FOAM_CELL_DIFFERENTIATION BP PPARA
GO_REGULATION_OF_NUCLEOSIDE_METABOLIC_PROCESS BP PPARA
GO_NEGATIVE_REGULATION_OF_PROTEIN_BINDING BP PPARA
GO_REGULATION_OF_LIPID_METABOLIC_PROCESS BP PPARA
GO_ENAMEL_MINERALIZATION BP PPARA
GO_NEGATIVE_REGULATION_OF_NUCLEOSIDE_METABOLIC_PROCESS BP PPARA
GO_RESPONSE_TO_ALKALOID BP PPARA
GO_NEGATIVE_REGULATION_OF_RESPONSE_TO_FOOD BP PPARA
GO_RESPONSE_TO_INSULIN BP PPARA
GO_REGULATION_OF_CARBOHYDRATE_METABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_RESPONSE_TO_FOOD BP PPARA
GO_REGULATION_OF_RECEPTOR_BIOSYNTHETIC_PROCESS BP PPARA
GO_NEGATIVE_REGULATION_OF_RESPONSE_TO_EXTRACELLULAR_STIMULUS BP PPARA
GO_REGULATION_OF_CELLULAR_KETONE_METABOLIC_PROCESS BP PPARA
GO_TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER BP PPARA
GO_RESPONSE_TO_NICOTINE BP PPARA
GO_NEGATIVE_REGULATION_OF_CARBOHYDRATE_METABOLIC_PROCESS BP PPARA
GO_POSITIVE_REGULATION_OF_LIPID_CATABOLIC_PROCESS BP PPARA
GO_AMELOGENESIS BP PPARA
GO_NEGATIVE_REGULATION_OF_BLOOD_PRESSURE BP PPARA
GO_NEGATIVE_REGULATION_OF_MACROPHAGE_DERIVED_FOAM_CELL_DIFFERENTIATION BP PPARA
GO_REGULATION_OF_CARBOHYDRATE_BIOSYNTHETIC_PROCESS BP PPARA
GO_REGULATION_OF_APPETITE BP PPARA
GO_NEGATIVE_REGULATION_OF_LIPID_STORAGE BP PPARA
GO_INTRACELLULAR_RECEPTOR_SIGNALING_PATHWAY BP PPARA
GO_REGULATION_OF_FATTY_ACID_OXIDATION BP PPARA
GO_BIOMINERAL_TISSUE_DEVELOPMENT BP PPARA
GO_POSITIVE_REGULATION_OF_FATTY_ACID_OXIDATION BP PPARA
GO_REGULATION_OF_CHOLESTEROL_STORAGE BP PPARA
GO_NEGATIVE_REGULATION_OF_NUCLEOTIDE_CATABOLIC_PROCESS BP PPARA
GO_NEGATIVE_REGULATION_OF_COFACTOR_METABOLIC_PROCESS BP PPARA
GO_POSITIVE_REGULATION_OF_FATTY_ACID_METABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_COFACTOR_METABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_LIPID_CATABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_PRI_MIRNA_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER BP PPARA
GO_FATTY_ACID_TRANSPORT BP PPARA
GO_REGULATION_OF_TRANSCRIPTION_REGULATORY_REGION_DNA_BINDING BP PPARA
GO_REGULATION_OF_CARBOHYDRATE_CATABOLIC_PROCESS BP PPARA
GO_POSITIVE_REGULATION_OF_GLUCONEOGENESIS BP PPARA
GO_REGULATION_OF_GLUCONEOGENESIS BP PPARA
GO_ODONTOGENESIS BP PPARA
GO_NEGATIVE_REGULATION_OF_NUCLEOTIDE_METABOLIC_PROCESS BP PPARA
GO_POSITIVE_REGULATION_OF_GLUCOSE_METABOLIC_PROCESS BP PPARA
GO_REGULATION_OF_FATTY_ACID_BETA_OXIDATION BP PPARA
GO_TRANSCRIPTION_FACTOR_ACTIVITY_DIRECT_LIGAND_REGULATED_SEQUENCE_SPECIFIC_DNA_BINDING MF PPARA
GO_STEROID_HORMONE_RECEPTOR_ACTIVITY MF PPARA
GO_RNA_POLYMERASE_II_REPRESSING_TRANSCRIPTION_FACTOR_BINDING MF PPARA
GO_TRANSCRIPTION_COFACTOR_BINDING MF PPARA
GO_TRANSCRIPTION_FACTOR_ACTIVITY_RNA_POLYMERASE_II_CORE_PROMOTER_PROXIMAL_REGION_SEQUENCE_SPECIFIC_BINDING MF PPARA
GO_TRANSCRIPTIONAL_REPRESSOR_ACTIVITY_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_BINDING MF PPARA
GO_DRUG_BINDING MF PPARA
GO_UBIQUITIN_LIKE_PROTEIN_CONJUGATING_ENZYME_BINDING MF PPARA
GO_TRANSCRIPTION_COACTIVATOR_BINDING MF PPARA
GO_REPRESSING_TRANSCRIPTION_FACTOR_BINDING MF PPARA
GO_CORE_PROMOTER_PROXIMAL_REGION_DNA_BINDING MF PPARA
GO_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_BINDING MF PPARA

Survival analysis of PPARA



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of PPARA