TF information

TF name: PKNOX1
TF family: Homeobox
Ensembl gene ID: ENSG00000160199
Ensembl protein ID: ENSP00000402243, ENSP00000291547
Entrez gene ID: 5316
Database name Link Database name Link
NCBI Gene: Genecards:
Uniprot: Wikipedia:
Cosmic 3D: Geneontology:
CCLE:

Frequency of PKNOX1 in all biosamples
Sample ID Biosample type Tissue type Biosample name TF Frequency
Sample_01_001Cell lineProstate22Rv10.16707021791768

PKNOX1 distribution in samples’ most representative CRC
Sample ID Tissue type Biosample type Biosample name

PKNOX1 distribution in all CRCs
Biosample type
Biosample name
Sample ID

Genomic distribution of SEs associated with PKNOX1
Download

Mutation of PKNOX1
Database name Link
gnomAD: gnomAD
ExAC: ExAC
ICGC:
Database name Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of PKNOX1

rsID Chr Start Stop Ref Alt Gene_region Gene_symble Effect TCGA_Occurrence
-chr214443323544433235GAexonicPKNOX1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr214444154044441540GAexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214443831244438312CTexonicPKNOX1nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr214444141444441414TCexonicPKNOX1nonsynonymous LIHC|1|373|0.00268
-chr214443831544438315GAexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214444893644448936GCexonicPKNOX1nonsynonymous LAML|1|197|0.00508
-chr214444141644441416CTexonicPKNOX1stopgain LUAD|1|543|0.00184
-chr214443325944433259CTexonicPKNOX1stopgain PRAD|1|499|0.00200
-chr214443317744433177GTsplicingPKNOX1splicing ESCA|1|185|0.00541
rs770143485chr214443326744433267TCexonicPKNOX1synonymous UCEC|1|248|0.00403
rs765013701chr214443332644433326CTexonicPKNOX1nonsynonymous PAAD|1|185|0.00541
-chr214442766444427664GTexonicPKNOX1stopgain LUAD|1|543|0.00184
-chr214444889744448897CAexonicPKNOX1nonsynonymous PAAD|1|185|0.00541
-chr214442454144424541ACexonicPKNOX1nonsynonymous LIHC|1|373|0.00268
-chr214443031444430314GCexonicPKNOX1nonsynonymous UCEC|1|248|0.00403
-chr214443025644430256AGexonicPKNOX1synonymous LIHC|1|373|0.00268
-chr214445011544450115GAexonicPKNOX1synonymous THYM|1|123|0.00813
-chr214443334944433349GTsplicingPKNOX1splicing BRCA|1|982|0.00102
-chr214442761944427619TCexonicPKNOX1synonymous UCEC|1|248|0.00403
-chr214443027644430276GAexonicPKNOX1nonsynonymous CESC|1|194|0.00515
-chr214443332544433325CTexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214443030444430304CGexonicPKNOX1nonsynonymous CESC|1|194|0.00515
-chr214443027044430270TCexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214444505644445056TGexonicPKNOX1nonsynonymous GBMLGG|1|820|0.00122,LGG|1|530|0.00189
-chr214445013744450137GCexonicPKNOX1nonsynonymous BRCA|1|982|0.00102
rs765796646chr214443710944437109CTexonicPKNOX1nonsynonymous UCEC|1|248|0.00403
-chr214443827244438272GTexonicPKNOX1nonsynonymous LUAD|1|543|0.00184
-chr214443827844438278CTexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214443707044437070CTexonicPKNOX1nonsynonymous GBM|1|290|0.00345,GBMLGG|1|820|0.00122
-chr214443824244438242GTsplicingPKNOX1splicing LUAD|1|543|0.00184
-chr214444145844441458GAexonicPKNOX1nonsynonymous BLCA|1|396|0.00253
rs754833123chr214443320244433202CTexonicPKNOX1nonsynonymous PRAD|1|499|0.00200
-chr214444153944441539GAexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214443831744438317ATexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214444891244448912CGexonicPKNOX1nonsynonymous LUSC|1|178|0.00562
-chr214444152644441526CGexonicPKNOX1synonymous BLCA|1|396|0.00253
-chr214443325244433252CGexonicPKNOX1nonsynonymous BLCA|1|396|0.00253
-chr214444153444441534ACexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214444889744448897CTexonicPKNOX1stopgain CESC|1|194|0.00515
-chr214445016944450169CGexonicPKNOX1nonsynonymous LUSC|1|178|0.00562
-chr214445005044450050CTexonicPKNOX1stopgain HNSC|1|512|0.00195
-chr214444150544441505GTexonicPKNOX1synonymous LUAD|6|543|0.01105
-chr214442762144427621AGexonicPKNOX1synonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
rs758208308chr214445014744450147CTexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214443707344437073CAexonicPKNOX1nonsynonymous THCA|1|504|0.00198
-chr214443020544430205TCexonicPKNOX1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
rs763181221chr214444897544448975AGexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214442765544427655GCexonicPKNOX1nonsynonymous BLCA|1|396|0.00253
-chr214444148644441486TCexonicPKNOX1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr214442761644427616GTexonicPKNOX1stopgain UCEC|1|248|0.00403
rs533645525chr214445002244450022GAexonicPKNOX1synonymous LIHC|1|373|0.00268
-chr214442766044427677AGAAGGAGTGAGCCCTCC-exonicPKNOX1nonframeshift SKCM|1|368|0.00272
rs746447164chr214443707244437072GAexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214443017644430176CAexonicPKNOX1nonsynonymous LUSC|1|178|0.00562
rs374571145chr214442767544427675TCexonicPKNOX1synonymous PRAD|1|499|0.00200
-chr214442767744427677CTexonicPKNOX1nonsynonymous SKCM|1|368|0.00272
-chr214444149144441491CGexonicPKNOX1nonsynonymous LUAD|1|543|0.00184
-chr214444881644448816ATexonicPKNOX1nonsynonymous KIPAN|1|799|0.00125,KIRC|1|451|0.00222
rs201260136chr214443710644437106CTexonicPKNOX1nonsynonymous STAD|2|395|0.00506,STES|2|395|0.00506
-chr214444498844444988AGexonicPKNOX1nonsynonymous STAD|1|395|0.00253,STES|1|395|0.00253
-chr214444888544448885A-exonicPKNOX1frameshift STAD|1|395|0.00253,STES|1|395|0.00253
rs371041625chr214442769844427698CTexonicPKNOX1nonsynonymous UCEC|1|248|0.00403
-chr214444502544445025GAexonicPKNOX1synonymous LUAD|1|543|0.00184
rs368363368chr214445017544450175CTexonicPKNOX1synonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204
-chr214443826944438269GAexonicPKNOX1nonsynonymous BRCA|1|982|0.00102
-chr214443022744430227GCexonicPKNOX1nonsynonymous CESC|1|194|0.00515
-chr214444143744441437CAexonicPKNOX1nonsynonymous UCEC|1|248|0.00403
-chr214444891844448918TGexonicPKNOX1nonsynonymous COAD|1|367|0.00272,COADREAD|1|489|0.00204

Disease information of PKNOX1
TF_name Disease_name Disease_class Disease_semantic_type TF_disease_source
PKNOX1 Colorectal Cancer C04;C06 Neoplastic Process UNIPROT

Pathway associated with PKNOX1
pathway_ID pathway_name pathway_source gene_number edge_number

Go term information of PKNOX1
GO_term_name GO_term_type TF_name
GO_LEUKOCYTE_ACTIVATION BP PKNOX1
GO_MYELOID_CELL_HOMEOSTASIS BP PKNOX1
GO_ERYTHROCYTE_HOMEOSTASIS BP PKNOX1
GO_LYMPHOCYTE_ACTIVATION BP PKNOX1
GO_T_CELL_DIFFERENTIATION BP PKNOX1
GO_LYMPHOCYTE_DIFFERENTIATION BP PKNOX1
GO_PROTEIN_HETERODIMERIZATION_ACTIVITY MF PKNOX1

Survival analysis of PKNOX1



Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.

Expression of PKNOX1