Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_02_021 | Cell line | Colon | V429 | 0.027097146151629 |
Sample_02_080 | Cell line | Lung | Calu-3 | 0.18181818181818 |
Sample_02_179 | Cell line | Urinary bladder | T24 | 0.32183908045977 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_02_179 | Urinary bladder | Cell line | T24 |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr16 | 86612832 | 86612832 | C | G | exonic | FOXL1 | nonsynonymous | OV|1|469|0.00213 |
- | chr16 | 86612374 | 86612374 | G | A | exonic | FOXL1 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr16 | 86612433 | 86612433 | C | T | exonic | FOXL1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr16 | 86613358 | 86613358 | C | A | exonic | FOXL1 | nonsynonymous | LUAD|2|543|0.00368 |
- | chr16 | 86612503 | 86612503 | C | T | exonic | FOXL1 | synonymous | SKCM|1|368|0.00272 |
- | chr16 | 86612649 | 86612649 | T | C | exonic | FOXL1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr16 | 86612659 | 86612659 | G | T | exonic | FOXL1 | synonymous | LUAD|1|543|0.00184 |
rs138392858 | chr16 | 86613328 | 86613328 | C | T | exonic | FOXL1 | synonymous | SKCM|1|368|0.00272 |
- | chr16 | 86613176 | 86613176 | G | - | exonic | FOXL1 | frameshift | ESCA|1|185|0.00541 |
- | chr16 | 86612503 | 86612503 | C | A | exonic | FOXL1 | synonymous | KIPAN|1|799|0.00125,KIRP|1|282|0.00355 |
- | chr16 | 86612389 | 86612389 | G | C | exonic | FOXL1 | synonymous | LIHC|1|373|0.00268 |
- | chr16 | 86612652 | 86612652 | T | C | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr16 | 86612679 | 86612679 | C | T | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253 |
rs369054293 | chr16 | 86613242 | 86613242 | C | T | exonic | FOXL1 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr16 | 86613236 | 86613236 | A | T | exonic | FOXL1 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr16 | 86612494 | 86612494 | C | T | exonic | FOXL1 | synonymous | HNSC|1|512|0.00195 |
- | chr16 | 86612511 | 86612511 | C | T | exonic | FOXL1 | nonsynonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr16 | 86612401 | 86612401 | G | A | exonic | FOXL1 | synonymous | CESC|1|194|0.00515 |
- | chr16 | 86612745 | 86612745 | G | T | exonic | FOXL1 | nonsynonymous | LUAD|1|543|0.00184 |
rs750324359 | chr16 | 86612429 | 86612429 | C | T | exonic | FOXL1 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr16 | 86612547 | 86612547 | A | G | exonic | FOXL1 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
rs767914376 | chr16 | 86612596 | 86612596 | C | A | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr16 | 86613231 | 86613231 | C | - | exonic | FOXL1 | frameshift | COADREAD|2|489|0.00409,READ|2|122|0.01639 |
- | chr16 | 86613253 | 86613253 | C | G | exonic | FOXL1 | nonsynonymous | BLCA|1|396|0.00253 |
- | chr16 | 86612650 | 86612650 | C | T | exonic | FOXL1 | synonymous | BLCA|1|396|0.00253 |
- | chr16 | 86612497 | 86612497 | G | A | exonic | FOXL1 | synonymous | LUAD|1|543|0.00184 |
- | chr16 | 86612660 | 86612660 | C | T | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr16 | 86612430 | 86612430 | C | T | exonic | FOXL1 | nonsynonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr16 | 86612535 | 86612535 | G | T | exonic | FOXL1 | nonsynonymous | PRAD|1|499|0.00200 |
- | chr16 | 86613217 | 86613217 | G | A | exonic | FOXL1 | synonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr16 | 86613223 | 86613223 | G | T | exonic | FOXL1 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr16 | 86612462 | 86612462 | G | A | exonic | FOXL1 | nonsynonymous | PRAD|1|499|0.00200 |
- | chr16 | 86612425 | 86612425 | C | T | exonic | FOXL1 | synonymous | BRCA|1|982|0.00102,SKCM|2|368|0.00543 |
rs777342351 | chr16 | 86612675 | 86612675 | C | T | exonic | FOXL1 | nonsynonymous | UVM|1|80|0.01250 |
- | chr16 | 86612413 | 86612413 | C | G | exonic | FOXL1 | synonymous | BLCA|1|396|0.00253 |
- | chr16 | 86612677 | 86612677 | G | C | exonic | FOXL1 | synonymous | LUAD|1|543|0.00184 |
rs781452561 | chr16 | 86612427 | 86612427 | C | T | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr16 | 86612642 | 86612642 | G | A | exonic | FOXL1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr16 | 86612470 | 86612470 | G | A | exonic | FOXL1 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
rs577050474 | chr16 | 86612809 | 86612809 | G | A | exonic | FOXL1 | synonymous | BLCA|1|396|0.00253 |
- | chr16 | 86612373 | 86612373 | C | T | exonic | FOXL1 | nonsynonymous | PRAD|2|499|0.00401 |
- | chr16 | 86612599 | 86612599 | G | A | exonic | FOXL1 | synonymous | UCEC|1|248|0.00403 |
- | chr16 | 86612522 | 86612522 | G | A | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|3|395|0.00759,STES|3|395|0.00759 |
- | chr16 | 86612389 | 86612389 | G | A | exonic | FOXL1 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr16 | 86613120 | 86613120 | A | G | exonic | FOXL1 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr16 | 86612523 | 86612523 | C | T | exonic | FOXL1 | nonsynonymous | LUAD|1|543|0.00184 |
- | chr16 | 86613133 | 86613133 | G | T | exonic | FOXL1 | synonymous | LUAD|1|543|0.00184 |
- | chr16 | 86613224 | 86613224 | G | A | exonic | FOXL1 | nonsynonymous | GBM|1|290|0.00345,GBMLGG|1|820|0.00122 |
- | chr16 | 86612542 | 86612542 | G | A | exonic | FOXL1 | synonymous | HNSC|2|512|0.00391 |
- | chr16 | 86612573 | 86612573 | C | A | exonic | FOXL1 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr16 | 86612345 | 86612345 | G | A | exonic | FOXL1 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,SKCM|1|368|0.00272 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_PROTEOGLYCAN_METABOLIC_PROCESS | BP | FOXL1 |
GO_PROTEOGLYCAN_BIOSYNTHETIC_PROCESS | BP | FOXL1 |
GO_MIDGUT_DEVELOPMENT | BP | FOXL1 |
GO_DNA_BINDING_BENDING | MF | FOXL1 |
GO_SEQUENCE_SPECIFIC_DNA_BINDING | MF | FOXL1 |