CR overview
CR: SMARCD1
Accession: Q96GM5
Protein names: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
Function type: Chromatin Remodeler
Histone type: Unkown
Methytor type: Unkown
Aliases: Rsc6p; BAF60A; CRACD1
PMID: 31992292 32514535
Disease: 5
Go term: 15
Pathway: 3
Hallmark: --
Super Enhancer:

chr12:50477837-50483856 chr12:50443553-50490272

Enhancer:

chr12:50481270-50482300 chr12:50558690-50560880 chr12:50635720-50638220 chr12:50818700-50820760 chr12:50389490-50390820 chr12:50396080-50396930 chr12:50479330-50479940 chr12:50548650-50549460 chr12:50567740-50569560 chr12:50410500-50412290 chr12:50550340-50552050 chr12:50498540-50499330 chr12:50024570-50025180 chr12:50066220-50068230 chr12:50069910-50071160 chr12:50497880-50498350 chr12:50506280-50508740 chr12:50633860-50635690 chr12:50645460-50646220 chr12:50647830-50649330 chr12:50642560-50644850 chr12:50675520-50677200 chr12:50417600-50419110 chr12:50690400-50691390 chr12:50707230-50709530 chr12:50042140-50042810 chr12:50043710-50044450 chr12:50482420-50483660 chr12:50295110-50297560 chr12:50367360-50368100 chr12:50368270-50368520 chr12:50451700-50452530 chr12:50452910-50453540 chr12:50065340-50066140 chr12:50608850-50609200 chr12:50525730-50526740 chr12:50091620-50094090 chr12:50400420-50402880 chr12:50795410-50797880 chr12:50907830-50910070 chr12:50074740-50075770 chr12:50913280-50915580 chr12:50124140-50125330 chr12:50234940-50236630 chr12:50283350-50283890 chr12:50283930-50284460 chr12:50345870-50347910 chr12:50348130-50348410 chr12:50356160-50356440 chr12:50541610-50543280 chr12:50281220-50282880 chr12:50625490-50627920 chr12:49897190-49898430 chr12:49899220-49900070 chr12:49900310-49901710 chr12:49912720-49912850 chr12:50017950-50018410 chr12:50059990-50062250 chr12:50064580-50065210 chr12:50073360-50073760 chr12:50077800-50078260 chr12:50078340-50078660 chr12:50143230-50145500 chr12:50176810-50179120 chr12:50399180-50400210 chr12:50415610-50416660 chr12:50459410-50460870 chr12:50589670-50590780 chr12:50591100-50591550 chr12:50593150-50593350 chr12:50650840-50652560 chr12:50719150-50721090 chr12:50780830-50781690 chr12:50783230-50785540 chr12:50930520-50932420 chr12:50961610-50962840 chr12:50965150-50967570 chr12:50968090-50970030 chr12:50983020-50984580 chr12:51126320-51127100 chr12:50265700-50267660 chr12:50593630-50594550 chr12:50193840-50195630 chr12:50267890-50269010 chr12:50453740-50455640 chr12:50509390-50511800 chr12:50652710-50654320 chr12:50664680-50666360 chr12:51084940-51085720 chr12:50330830-50332920 chr12:50659460-50660000 chr12:50140700-50140940 chr12:50141070-50141590 chr12:50142080-50142460 chr12:50246210-50248360 chr12:50282990-50283260 chr12:50284500-50284620 chr12:50285700-50286970 chr12:50667770-50668630 chr12:50669020-50670170 chr12:50670800-50671950 chr12:50705220-50706680 chr12:50798090-50798390 chr12:50798610-50799080 chr12:50919940-50920490 chr12:50942400-50943060 chr12:50943370-50945710 chr12:50950290-50951560 chr12:50691570-50692300 chr12:50920800-50921590 chr12:50624600-50625440 chr12:50187220-50187510 chr12:50187680-50188540 chr12:50528500-50529420 chr12:49523510-49525080 chr12:50025710-50026370 chr12:49741340-49742550 chr12:50604220-50604930 chr12:50605030-50606490 chr12:50611360-50611660 chr12:50742450-50743640 chr12:51012020-51012290 chr12:51018020-51018230 chr12:51019840-51021090 chr12:51021160-51021970 chr12:51040480-51041960 chr12:51034640-51036870 chr12:50313570-50315700 chr12:50146860-50149040 chr12:51055330-51055820 chr12:50199820-50201280 chr12:50031370-50031510 chr12:50081740-50084060 chr12:50948230-50950180 chr12:51018260-51019750 chr12:50183680-50184310 chr12:50191180-50192130 chr12:50380920-50382940 chr12:50063680-50064070 chr12:50922180-50923650 chr12:50514420-50515890 chr12:50516740-50518600 chr12:49883360-49884460 chr12:50371540-50373890 chr12:50374280-50375310 chr12:50566540-50567180 chr12:50275350-50276350 chr12:51054100-51054730

Promoter:

chr12:50083200-50087200

 ChIP-seq based regulatory details of SMARCD1
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_02_0181 SMARCD1 cell line HCT116 SRR11969083 GSE152144 GEO
CR_02_0182 SMARCD1 cell line HCT116 SRR11969084 GSE152144 GEO
 Downstream target genes of SMARCD1
 Protein-protein interaction of SMARCD1
 Annotation of SMARCD1
 TCGA cancer survival map of SMARCD1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
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Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
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Reset The plot is based on the datasets of list.