CR overview
| CR: | DNMT3B | |
| Accession: | Q9UBC3 | |
| Protein names: | DNA cytosine-5--methyltransferase 3 beta transcript variant 9 (EC 2.1.1.37) | |
| Function type: | DNA Methylator | |
| Histone type: | Unkown | |
| Methytor type: | Writer | |
| Aliases: | DNA (cytosine-5-)-methyltransferase 3(DNMT);DNA methyltransferases;DNMT-MBD | |
| PMID: | 10555141 31771617 32051335 | |
| Disease: | 24 | |
| Go term: | 26 | |
| Pathway: | 5 | |
| Hallmark: | -- | |
| Super Enhancer: | chr20:31406757-31421227 chr20:31337151-31353353 chr20:31336879-31353529 chr20:31336527-31399431 chr20:31336880-31370311 chr20:31375289-31387273 chr20:31336876-31353557 chr20:31337251-31387217 chr20:31336949-31366095 chr20:31331318-31365533 chr20:31330390-31369906 chr20:31319213-31365611 chr20:31319978-31366211 chr20:31318921-31366228 chr20:31330216-31369653 chr20:31330885-31370333 chr20:31318943-31365750 chr20:31330183-31353570 chr20:31330087-31353713 chr20:31331387-31354028 chr20:31325265-31366241 chr20:31323905-31366235 chr20:31315709-31366390 chr20:31325094-31366243 chr20:31323916-31366365 |
|
| Enhancer: |
chr20:31407840-31410020 chr20:31601760-31603240 chr20:31604910-31606060 chr20:31606160-31606440 chr20:31606630-31606860 chr20:31606920-31607380 chr20:31607560-31608130 chr20:31608200-31608340 chr20:31608390-31609080 chr20:31609610-31611140 chr20:31678610-31680260 chr20:31682950-31685420 chr20:31766040-31767400 chr20:31603300-31604840 chr20:31585490-31587870 chr20:31329040-31331110 chr20:31350510-31352110 chr20:31426850-31427540 chr20:31056640-31057130 chr20:31067290-31069780 chr20:31115720-31118020 chr20:31149760-31151090 chr20:31214230-31216680 chr20:31267980-31270280 chr20:30932120-30934050 chr20:31384680-31384990 chr20:31385110-31386260 chr20:31383500-31384590 chr20:31379520-31380430 chr20:31368270-31369150 chr20:31377060-31379400 chr20:31394130-31395560 chr20:31572990-31573540 chr20:31795590-31797840 chr20:31878910-31879710 chr20:31935290-31937060 chr20:31967500-31969230 chr20:31972150-31973330 chr20:31973580-31975120 chr20:31975340-31975700 chr20:31994600-31995760 chr20:31571760-31572900 chr20:31770640-31772040 chr20:31885400-31887700 chr20:31429400-31431600 chr20:31597240-31598820 chr20:31598920-31600600 chr20:31600710-31601610 chr20:31609150-31609520 chr20:31628120-31629770 chr20:31629820-31630620 chr20:31631170-31631820 chr20:31295120-31296550 chr20:31410150-31411360 chr20:31411420-31412380 chr20:31325000-31326680 chr20:31318390-31320580 chr20:31446040-31447180 chr20:31161680-31163460 chr20:30739970-30742150 chr20:30811730-30812900 chr20:30814240-30816060 chr20:30914690-30915350 chr20:30929780-30931980 chr20:30950440-30951880 chr20:30951950-30952870 chr20:30953120-30953350 chr20:31027120-31027720 chr20:31035620-31037160 chr20:31037260-31039160 chr20:30816260-30818340 chr20:31622720-31622880 chr20:31622950-31623260 chr20:32207410-32209450 chr20:31011420-31011650 chr20:31019480-31019570 chr20:31019920-31020680 chr20:31020790-31021080 chr20:31104100-31106580 chr20:31262880-31264260 chr20:31381400-31383210 chr20:31069790-31071160 chr20:31483750-31485120 chr20:30949620-30950180 chr20:30972140-30972640 chr20:31060220-31062400 chr20:31380580-31381340 chr20:30755720-30756890 chr20:30956930-30958380 chr20:31084620-31086380 chr20:31222070-31223000 chr20:31282780-31284010 chr20:31297100-31297660 chr20:31563450-31563810 chr20:31260110-31262610 chr20:31372040-31372560 chr20:31383340-31383450 chr20:31190030-31191520 chr20:31315230-31315690 chr20:31128980-31129700 |
|
| Promoter: |
chr20:32760385-32764385 |
ChIP-seq based regulatory details of DNMT3B
| Sample ID | CR | Biosample type | Biosample term name | File accession | Experiment accession | Source |
|---|---|---|---|---|---|---|
| CR_01_0442 | DNMT3B | cell line | HepG2 | ENCFF470IAE | ENCSR156CWW | Encode |
| CR_01_0525 | DNMT3B | cell line | HepG2 | ENCFF699XDW | ENCSR156CWW | Encode |
| CR_02_0350 | DNMT3B | cell line | MCF10CA1a | SRR14667021 | GSE175639 | GEO |
| CR_02_0351 | DNMT3B | cell line | MCF10CA2a | SRR14667022 | GSE175639 | GEO |
| CR_02_0352 | DNMT3B | cell line | MCF10CA3a | SRR14667023 | GSE175639 | GEO |
| CR_02_0353 | DNMT3B | cell line | MCF10CA4a | SRR14667024 | GSE175639 | GEO |
| CR_02_0354 | DNMT3B | cell line | MCF10CA5a | SRR14667025 | GSE175639 | GEO |
| CR_02_0355 | DNMT3B | cell line | MCF10CA1a | SRR14667026 | GSE175639 | GEO |
| CR_02_0631 | DNMT3B | None | None | SRR5315128 | GSE95747 | GEO |
| CR_02_0632 | DNMT3B | None | None | SRR5315130 | GSE95746 | GEO |
| CR_02_0667 | DNMT3B | cell line | HUES8 hESCs | SRR5616806 | GSE89728 | GEO |
| CR_02_1221 | DNMT3B | cell line | H1 hESCs | SRR14005188 | GSE169207/GSE150072 | GEO |
| CR_02_1222 | DNMT3B | cell line | H1 hESCs | SRR14005189 | GSE169207/GSE150072 | GEO |
| CR_02_1224 | DNMT3B | cell line | H1 hESCs | SRR14005208 | GSE169207/GSE150072 | GEO |
| CR_02_1225 | DNMT3B | cell line | H1 hESCs | SRR14005209 | GSE169207/GSE150072 | GEO |
| CR_02_1229 | DNMT3B | cell line | H1 hESCs | SRR14005214 | GSE169207/GSE150072 | GEO |
| CR_02_1230 | DNMT3B | cell line | H1 hESCs | SRR14005215 | GSE169207/GSE150072 | GEO |
| CR_02_1234 | DNMT3B | cell line | H1 hESCs | SRR14005228 | GSE169207/GSE150072 | GEO |
| CR_02_1235 | DNMT3B | cell line | H1 hESCs | SRR14005229 | GSE169207/GSE150072 | GEO |
| CR_02_1507 | DNMT3B | cell line | B-LCL | SRR5315129 | GSE95747/GSE95746 | GEO |
| CR_02_1508 | DNMT3B | cell line | B-LCL | SRR5315131 | GSE95747/GSE95746 | GEO |
Downstream target genes of DNMT3B
Upstream regulatory details of DNMT3B
Protein-protein interaction of DNMT3B
Annotation of DNMT3B
TCGA cancer survival map of DNMT3B
Other information of DNMT3B