CR overview
| CR: | TRIM28 | |
| Accession: | Q13263 | |
| Protein names: | Transcription intermediary factor 1-beta | |
| Function type: | Histone Modifier | |
| Histone type: | Reader | |
| Methytor type: | Unkown | |
| Aliases: | Histone methyltransferases | |
| PMID: | 34419074 34503347 34373456 | |
| Disease: | 0 | |
| Go term: | 45 | |
| Pathway: | 6 | |
| Hallmark: | 1 | |
| Super Enhancer: | chr19:59048903-59058240 chr19:59054969-59058289 |
|
| Enhancer: |
chr19:58790510-58792710 chr19:58497460-58499570 chr19:58660440-58662110 chr19:58694810-58695290 chr19:58740310-58740830 chr19:58920530-58921300 chr19:58978550-58980540 chr19:59010280-59010480 chr19:59011060-59011700 chr19:59029040-59030630 chr19:59056460-59056650 chr19:58571770-58572940 chr19:59063810-59065410 chr19:58695370-58697060 chr19:58963070-58965060 chr19:59010590-59010850 chr19:59116800-59119150 chr19:58324790-58326070 chr19:58950060-58951120 chr19:58987870-58988540 chr19:58439420-58441420 chr19:58445270-58446520 chr19:58466170-58467960 chr19:58499670-58499960 chr19:58570680-58571330 chr19:58573080-58574810 chr19:58575300-58576580 chr19:58838480-58840970 chr19:58871760-58874040 chr19:58890180-58892310 chr19:58397640-58400130 chr19:58425420-58427740 chr19:58545530-58547130 chr19:58607040-58609290 chr19:58988930-58989000 chr19:58456400-58458800 chr19:58740940-58741750 chr19:58667150-58667750 chr19:58451740-58452200 chr19:58532840-58534020 chr19:58537310-58539130 chr19:58549580-58551810 chr19:58989190-58989450 chr19:58989550-58991000 chr19:59062080-59062930 chr19:59063140-59063270 chr19:58864560-58864650 chr19:59010060-59010150 chr19:59018960-59021210 chr19:59021370-59022080 chr19:58999250-59001110 chr19:59075340-59076330 chr19:59095760-59098140 |
|
| Promoter: |
chr19:58542064-58546064 |
ChIP-seq based regulatory details of TRIM28
| Sample ID | CR | Biosample type | Biosample term name | File accession | Experiment accession | Source |
|---|---|---|---|---|---|---|
| CR_01_0096 | TRIM28 | cell line | K562 | ENCFF000QJH | ENCSR000BRW | Encode |
| CR_01_0097 | TRIM28 | cell line | K562 | ENCFF000QJK | ENCSR000BRW | Encode |
| CR_01_0164 | TRIM28 | cell line | HEK293 | ENCFF000WYV | ENCSR000EUZ | Encode |
| CR_01_0165 | TRIM28 | cell line | HEK293 | ENCFF000WYW | ENCSR000EUZ | Encode |
| CR_01_0361 | TRIM28 | cell line | K562 | ENCFF261BMQ | ENCSR000BRW | Encode |
| CR_01_0565 | TRIM28 | cell line | K562 | ENCFF784WEP | ENCSR474CVP | Encode |
| CR_01_0630 | TRIM28 | cell line | K562 | ENCFF914HTT | ENCSR474CVP | Encode |
| CR_01_0799 | TRIM28 | cell line | K562 | ENCFF000YSZ | ENCSR000EVY | Encode |
| CR_01_0800 | TRIM28 | cell line | K562 | ENCFF000YTA | ENCSR000EVY | Encode |
| CR_01_0820 | TRIM28 | cell line | HEK293 | ENCFF000ZTJ | ENCSR618HNF | Encode |
| CR_01_0821 | TRIM28 | cell line | HEK293 | ENCFF000ZTO | ENCSR618HNF | Encode |
| CR_02_0326 | TRIM28 | cell line | HEK293 | SRR14636838 | GSE174958 | GEO |
| CR_02_0327 | TRIM28 | cell line | HEK293 | SRR14636839 | GSE174958 | GEO |
| CR_02_0481 | TRIM28 | cell line | MCF7 | SRR3048489 | GSE76271 | GEO |
| CR_02_0527 | TRIM28 | iPS-derived cardiomyocytes | BJAB B-cell line | SRR4083592 | GSE86154 | GEO |
| CR_02_0620 | TRIM28 | cell line | LNCaP | SRR5238098 | GSE94682 | GEO |
| CR_02_0621 | TRIM28 | cell line | LNCaP | SRR5238099 | GSE94682 | GEO |
| CR_02_0622 | TRIM28 | cell line | LNCaP | SRR5238100 | GSE94682 | GEO |
| CR_02_0623 | TRIM28 | cell line | LNCaP | SRR5238101 | GSE94682 | GEO |
| CR_02_1437 | TRIM28 | cell line | K562 | SRR8660405 | GSE127692 | GEO |
| CR_02_1438 | TRIM28 | cell line | K562 | SRR8660406 | GSE127692 | GEO |
Downstream target genes of TRIM28
Upstream regulatory details of TRIM28
Protein-protein interaction of TRIM28
Annotation of TRIM28
TCGA cancer survival map of TRIM28
Other information of TRIM28