CR overview
CR: CBX3
Accession: Q13185
Protein names: Chromobox protein homolog 3
Function type: Histone Modifier
Histone type: Reader
Methytor type: Unkown
Aliases: RING2-L3MBTL2, L3MBTL1;Polycomb Repressive Complex 1;CHD-ARID
PMID: 29206900 34721405 34785774
Disease: 0
Go term: 24
Pathway: 2
Hallmark: --
Super Enhancer:

chr7:26238704-26242941 chr7:26235290-26246240 chr7:26238813-26242769 chr7:26238841-26242692 chr7:26237907-26256542 chr7:26238091-26243806 chr7:26238738-26242922 chr7:26238700-26243183 chr7:26238715-26242816 chr7:26238496-26243303 chr7:26238816-26243077 chr7:26236315-26245481 chr7:26238803-26243112 chr7:26237785-26245818 chr7:26238213-26243658 chr7:26238745-26243186 chr7:26238639-26243145 chr7:26237739-26245679 chr7:26238090-26243954 chr7:26236301-26248081 chr7:26236983-26245801 chr7:26237861-26244842 chr7:26238226-26243834 chr7:26237842-26243758 chr7:26237134-26245076 chr7:26238017-26243731 chr7:26237911-26243765 chr7:26237905-26243648 chr7:26237947-26244424 chr7:26236938-26245189 chr7:26238570-26243021

Enhancer:

chr7:26205520-26207930 chr7:26488210-26490550 chr7:26588890-26590130 chr7:26223400-26224150 chr7:26233320-26235460 chr7:26192690-26194800 chr7:26529940-26531680 chr7:26595500-26596490 chr7:26652320-26654410 chr7:26667080-26669140 chr7:25898480-25899440 chr7:25899850-25901100 chr7:26140490-26142420 chr7:26331750-26334230 chr7:26479700-26481860 chr7:26697400-26699260 chr7:26427110-26429040 chr7:26226760-26229240 chr7:26235530-26235830 chr7:25917260-25918200 chr7:25979140-25981620 chr7:26353080-26354840 chr7:26373200-26375490 chr7:25901140-25903530 chr7:26231960-26232110 chr7:26232200-26232870 chr7:25683390-25683950 chr7:25695790-25696920 chr7:25699580-25700300 chr7:25846350-25848620 chr7:25940070-25941770 chr7:25656900-25657370 chr7:25704720-25706560 chr7:25843620-25844230 chr7:26122370-26124510 chr7:26128100-26129860 chr7:26360630-26361870 chr7:25817460-25818000 chr7:26003820-26006060 chr7:26006500-26008990 chr7:26136340-26138410 chr7:26221610-26223320 chr7:26233020-26233190 chr7:26245410-26245750 chr7:26253230-26254890 chr7:25842020-25842620 chr7:26125140-26125780 chr7:26590140-26590810 chr7:26304500-26306500 chr7:25984400-25986360 chr7:25870390-25871980 chr7:26375580-26377680 chr7:26385070-26386030 chr7:25791900-25794130 chr7:26112600-26113320 chr7:26210360-26210830 chr7:26554780-26556700

Promoter:

chr7:26199162-26203162

 ChIP-seq based regulatory details of CBX3
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_01_0092 CBX3 cell line K562 ENCFF000PXA ENCSR000BRT Encode
CR_01_0093 CBX3 cell line K562 ENCFF000PXB ENCSR000BRT Encode
CR_01_0448 CBX3 cell line GM12878 ENCFF500QDP ENCSR549NPZ Encode
CR_01_0455 CBX3 cell line GM12878 ENCFF525YYN ENCSR549NPZ Encode
CR_01_0692 CBX3 cell line K562 ENCFF000BVP ENCSR000ATV Encode
CR_01_0733 CBX3 cell line HCT116 ENCFF000OYG ENCSR000BUH Encode
CR_01_0734 CBX3 cell line HCT116 ENCFF000OYN ENCSR000BUH Encode
CR_02_0203 CBX3 cell line HCT116 SRR11969137 GSE152144 GEO
CR_02_0665 CBX3 cell line H1 hESCs SRR5832776 GSE101135 GEO
CR_02_0673 CBX3 cell line H1 hESCs SRR5832777 GSE101135 GEO
CR_02_0683 CBX3 cell line GM12878 SRR5832869 GSE101211 GEO
CR_02_0684 CBX3 cell line GM12878 SRR5832870 GSE101211 GEO
 Downstream target genes of CBX3
 Protein-protein interaction of CBX3
 Annotation of CBX3
 TCGA cancer survival map of CBX3


Calculate the hazards ratio based on Cox PH Model.
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Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
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