CR overview
CR: KDM5A
Accession: P29375
Protein names: Lysine-specific demethylase 5A
Function type: Histone Modifier
Histone type: Eraser
Methytor type: Unkown
Aliases: lysine (K)-specific demethylase (KDM);Histone demethylases
PMID: 33596982 32908002 31727771 33087165
Disease: 4
Go term: 26
Pathway: 1
Hallmark: --
Super Enhancer:

Enhancer:

chr12:406370-407860 chr12:487720-489000 chr12:750190-752680 chr12:312910-313180 chr12:461490-462740 chr12:319740-321190 chr12:740150-741370 chr12:538410-539820 chr12:546370-547420 chr12:673850-674380 chr12:674570-675110 chr12:671060-673460 chr12:73380-75540 chr12:93980-95900 chr12:176600-178030 chr12:212080-214440 chr12:667830-668460 chr12:668590-670500 chr12:741410-741670 chr12:663150-664900 chr12:793100-794190 chr12:794200-796620 chr12:863490-865430 chr12:767070-769510 chr12:912860-914760 chr12:931760-933840 chr12:248520-249400 chr12:328370-329780 chr12:459950-461190 chr12:441670-442650 chr12:453290-453730 chr12:319210-319370 chr12:321280-322450 chr12:91520-93440 chr12:199320-200080 chr12:473300-474660 chr12:480370-482330 chr12:596900-599150 chr12:650100-652530 chr12:622210-623630 chr12:638610-641040 chr12:402340-402890 chr12:747810-750000 chr12:896480-897090 chr12:898030-899990 chr12:1114910-1117200 chr12:661330-661630 chr12:661700-662350 chr12:483820-484630 chr12:148000-148880 chr12:530280-530940 chr12:705970-708350 chr12:745700-746360 chr12:746780-747710 chr12:272080-272650 chr12:821140-823440 chr12:654640-655810 chr12:582130-584180 chr12:831390-832620 chr12:849560-850600 chr12:585130-586390 chr12:628880-629610 chr12:446170-446740 chr12:448710-449080

Promoter:

chr12:387320-391320

 ChIP-seq based regulatory details of KDM5A
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_01_0373 KDM5A cell line H1-hESC ENCFF281HTF ENCSR160ZLP Encode
CR_01_0440 KDM5A cell line HepG2 ENCFF465MKE ENCSR872ZHM Encode
CR_01_0465 KDM5A cell line A549 ENCFF564QJZ ENCSR933MHJ Encode
CR_01_0507 KDM5A cell line HepG2 ENCFF657KNO ENCSR872ZHM Encode
CR_01_0555 KDM5A cell line H1-hESC ENCFF769WTD ENCSR160ZLP Encode
CR_01_0610 KDM5A cell line A549 ENCFF883YYR ENCSR933MHJ Encode
CR_02_0133 KDM5A cell line MM.1S SRR11476869 GSE148048 GEO
CR_02_0204 KDM5A cell line leukemia SRR12005663 GSE152397 GEO
CR_02_0735 KDM5A cell line A549 SRR5833160 GSE101372 GEO
CR_02_0736 KDM5A cell line A549 SRR5833161 GSE101372 GEO
CR_02_0741 KDM5A cell line GM12878 SRR5833190 GSE101379 GEO
CR_02_0742 KDM5A cell line GM12878 SRR5833191 GSE101379 GEO
CR_02_1238 KDM5A cell line HepG2 SRR14105308 GSE170428 GEO
CR_02_1239 KDM5A cell line HepG2 SRR14105309 GSE170428 GEO
 Downstream target genes of KDM5A
 Protein-protein interaction of KDM5A
 Annotation of KDM5A
 TCGA cancer survival map of KDM5A


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
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Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
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Reset The plot is based on the datasets of list.