CR overview
| CR: | HDAC1 | |
| Accession: | Q13547 | |
| Protein names: | Histone deacetylase 1 | |
| Function type: | Histone Modifier | |
| Histone type: | Eraser | |
| Methytor type: | Unkown | |
| Aliases: | SWI/SNF_Brm, NuRD, BHC, MeCP1, mSin3A, core HDAC, mSin3A-like complex, RING2-L3MBTL2, CREST-BRG1, LSD-CoREST;Histone deacetylase (HDAC);ATP-dependent chromatin remodelling;HDAC | |
| PMID: | 31913353 30267710 32424276 35044827 | |
| Disease: | 11 | |
| Go term: | 74 | |
| Pathway: | 54 | |
| Hallmark: | 2 | |
| Super Enhancer: |
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| Enhancer: |
chr1:32814090-32814510 chr1:32814590-32815460 chr1:32859740-32860000 chr1:32800700-32801540 chr1:32115840-32117840 chr1:32131680-32133170 chr1:32646120-32646840 chr1:32681140-32681400 chr1:32706270-32706730 chr1:32229340-32229480 chr1:32538650-32540550 chr1:32541420-32542360 chr1:32645380-32645920 chr1:32742390-32743950 chr1:32930710-32932120 chr1:32741270-32741510 chr1:32885640-32887180 chr1:32837200-32838620 chr1:33005170-33007630 chr1:32797840-32798300 chr1:32130840-32131180 chr1:32133810-32134400 chr1:32134460-32136200 chr1:32136240-32137210 chr1:32137260-32138010 chr1:32560570-32561560 chr1:32674960-32676870 chr1:32705030-32705460 chr1:33231430-33233380 chr1:31896700-31897520 chr1:32739830-32739920 chr1:32740040-32740330 chr1:32740420-32740590 chr1:32740680-32740920 chr1:32741020-32741160 chr1:32581000-32581730 chr1:32798350-32798610 chr1:32623960-32625000 chr1:32627650-32627960 chr1:32799220-32799420 chr1:32353830-32356290 chr1:32402120-32403580 chr1:32716970-32718680 chr1:32780000-32782260 chr1:32857550-32859680 chr1:33088340-33090210 chr1:33092590-33093100 chr1:32729160-32729490 chr1:32729680-32730100 chr1:32730560-32731810 chr1:32442590-32444080 chr1:32540680-32541080 chr1:32797180-32797270 chr1:32741660-32741930 chr1:32909530-32910430 chr1:32676920-32677360 chr1:32692930-32694090 chr1:32694210-32694320 chr1:32796510-32797070 chr1:32797410-32797690 chr1:32742090-32742200 chr1:32133220-32133760 chr1:32152990-32154060 chr1:32154100-32154460 chr1:32155450-32155960 chr1:32566160-32568030 chr1:33060820-33062210 chr1:32090720-32092390 chr1:32138440-32140600 chr1:32140640-32140850 chr1:32159770-32160780 chr1:32164210-32165410 chr1:32165720-32167720 chr1:32167830-32169430 chr1:32189280-32190390 chr1:32215190-32217240 chr1:32223110-32224260 chr1:32256890-32257330 chr1:32262320-32263800 chr1:32263920-32264040 chr1:32264200-32265000 chr1:32267300-32269470 chr1:32296800-32298220 chr1:32497240-32498780 chr1:32586520-32587560 chr1:32598480-32600210 chr1:32616460-32618000 chr1:32647180-32649120 chr1:32771340-32773780 chr1:33166070-33168200 chr1:33189900-33191960 chr1:33194850-33196420 chr1:33207790-33210200 chr1:33256860-33258800 chr1:33261160-33261970 chr1:33263840-33264180 chr1:33264230-33265080 chr1:33327070-33327860 chr1:33334600-33336250 chr1:33365150-33366820 chr1:32259840-32262190 chr1:32276410-32278070 chr1:32307820-32309920 chr1:32604010-32605840 chr1:32700810-32702620 chr1:32343470-32344390 chr1:32959320-32960830 chr1:32131540-32131630 chr1:32154680-32155340 chr1:32155990-32156120 chr1:32156170-32156780 chr1:32156820-32157010 chr1:32160820-32161360 chr1:32650220-32652680 chr1:33214820-33215330 chr1:33223940-33226240 chr1:33233560-33233660 chr1:33233720-33234250 chr1:33235390-33235480 chr1:33240570-33240830 chr1:33241690-33242660 chr1:33243930-33244890 chr1:33359230-33359360 chr1:33363920-33364930 chr1:33415380-33415760 chr1:33418500-33420190 chr1:32161740-32162560 chr1:32694840-32695980 chr1:32795350-32796170 chr1:32900620-32902000 chr1:32919690-32920760 chr1:32933480-32934900 chr1:32151730-32151840 chr1:32201500-32201920 chr1:32222420-32222800 chr1:32623050-32623860 chr1:32205240-32205520 chr1:32702880-32704240 chr1:32369320-32371220 chr1:32912950-32915320 chr1:31778370-31780600 chr1:31826070-31827780 chr1:31840340-31842230 chr1:31898760-31899500 chr1:31899670-31901820 chr1:31906030-31906910 chr1:31907530-31908820 chr1:32048840-32049060 chr1:32049180-32050270 chr1:32051080-32051350 chr1:32051480-32052310 chr1:32087570-32088240 chr1:32090350-32090590 chr1:32131210-32131480 chr1:32140910-32142260 chr1:32151370-32151690 chr1:32165530-32165640 chr1:32202320-32202880 chr1:32452220-32453600 chr1:32810660-32812900 chr1:32842340-32843570 chr1:33737900-33739400 chr1:33752200-33753080 chr1:33754910-33755690 chr1:32390260-32391720 chr1:32375710-32377290 chr1:32377430-32379190 chr1:33102260-33103700 chr1:33076930-33079270 chr1:32366370-32368750 chr1:32678240-32678350 chr1:32678390-32678660 chr1:32526460-32527090 |
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| Promoter: |
chr1:32290083-32294083 |
ChIP-seq based regulatory details of HDAC1
| Sample ID | CR | Biosample type | Biosample term name | File accession | Experiment accession | Source |
|---|---|---|---|---|---|---|
| CR_01_0266 | HDAC1 | cell line | HepG2 | ENCFF008JGE | ENCSR362CPB | Encode |
| CR_01_0286 | HDAC1 | cell line | HepG2 | ENCFF058HDH | ENCSR362CPB | Encode |
| CR_01_0368 | HDAC1 | cell line | K562 | ENCFF269QCW | ENCSR000AQF | Encode |
| CR_01_0473 | HDAC1 | cell line | K562 | ENCFF581QYR | ENCSR568PGX | Encode |
| CR_01_0515 | HDAC1 | cell line | K562 | ENCFF677ULQ | ENCSR568PGX | Encode |
| CR_01_0576 | HDAC1 | cell line | K562 | ENCFF814BAR | ENCSR711VWL | Encode |
| CR_01_0622 | HDAC1 | cell line | K562 | ENCFF895UGJ | ENCSR568PGX | Encode |
| CR_01_0666 | HDAC1 | cell line | K562 | ENCFF992PSP | ENCSR711VWL | Encode |
| CR_01_0967 | HDAC1 | cell line | K562 | ENCFF594HPD | ENCSR000AQF | Encode |
| CR_02_0134 | HDAC1 | cell line | EBV-transformed LCLs | SRR11488844 | GSE148165 | GEO |
| CR_02_0135 | HDAC1 | cell line | EBV-transformed LCLs | SRR11488845 | GSE148165 | GEO |
| CR_02_0274 | HDAC1 | cell line | HepG2 | SRR14103451 | GSE169965 | GEO |
| CR_02_0837 | HDAC1 | cell line | human AML cells | SRR9157045 | GSE131939 | GEO |
| CR_02_1473 | HDAC1 | cell line | HepG2 | SRR14103450 | GSE169965 | GEO |
Downstream target genes of HDAC1
Upstream regulatory details of HDAC1
Protein-protein interaction of HDAC1
Annotation of HDAC1
TCGA cancer survival map of HDAC1
Other information of HDAC1