Cancer CRCdb

Sample ID	Biosample type	Tissue type	Biosample name	TF Frequency
Sample_02_021	Cell line	Colon	V429	0.036321706543673
Sample_02_200	Cell line	Stomach	RERF-GC-1B	0.5

Sample ID	Tissue type	Biosample type	Biosample name
Sample_02_200	Stomach	Cell line	RERF-GC-1B

Database name	Link
gnomAD:	gnomAD
ExAC:	ExAC
ICGC:

Database name	Link
Cosmic:
Cosmic cell lines:
Depmap:

TCGA somatic mutations and clinical variants of ZNF143

rsID	Chr	Start	Stop	Ref	Alt	Gene_region	Gene_symble	Effect	TCGA_Occurrence
-	chr11	9522678	9522678	G	T	exonic	ZNF143	synonymous	BLCA\|1\|396\|0.00253
-	chr11	9530235	9530235	A	C	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9496101	9496101	G	A	exonic	ZNF143	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9519288	9519288	A	C	exonic	ZNF143	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr11	9495505	9495505	G	T	exonic	ZNF143	nonsynonymous	CESC\|1\|194\|0.00515
-	chr11	9500065	9500065	G	A	exonic	ZNF143	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr11	9516200	9516200	T	C	exonic	ZNF143	nonsynonymous	BRCA\|1\|982\|0.00102
-	chr11	9519272	9519272	C	T	exonic	ZNF143	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr11	9546840	9546840	G	A	exonic	ZNF143	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr11	9496117	9496117	G	C	exonic	ZNF143	nonsynonymous	ESCA\|2\|185\|0.01081
rs775453952	chr11	9516301	9516301	C	T	exonic	ZNF143	nonsynonymous	CESC\|1\|194\|0.00515
-	chr11	9492878	9492878	G	T	exonic	ZNF143	nonsynonymous	ESCA\|1\|185\|0.00541
-	chr11	9496112	9496112	G	T	exonic	ZNF143	nonsynonymous	CESC\|1\|194\|0.00515
-	chr11	9519322	9519322	A	T	exonic	ZNF143	synonymous	PAAD\|1\|185\|0.00541
-	chr11	9546884	9546884	G	C	exonic	ZNF143	nonsynonymous	BLCA\|1\|396\|0.00253
-	chr11	9492905	9492905	C	T	exonic	ZNF143	nonsynonymous	SKCM\|1\|368\|0.00272
-	chr11	9519221	9519221	G	T	splicing	ZNF143	splicing	TGCT\|1\|155\|0.00645
-	chr11	9522727	9522728	GG	-	exonic	ZNF143	frameshift	ESCA\|1\|185\|0.00541
rs745940975	chr11	9494243	9494243	T	C	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
-	chr11	9501033	9501033	A	G	exonic	ZNF143	synonymous	BRCA\|1\|982\|0.00102
-	chr11	9534025	9534025	A	G	exonic	ZNF143	nonsynonymous	ESCA\|1\|185\|0.00541
rs751979933	chr11	9537777	9537777	C	T	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
-	chr11	9522638	9522638	G	C	exonic	ZNF143	nonsynonymous	BLCA\|1\|396\|0.00253
rs201816187	chr11	9537831	9537831	C	T	exonic	ZNF143	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9530342	9530342	G	A	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9546936	9546936	G	A	intronic	ZNF143	unknown	BRCA\|1\|982\|0.00102
rs147334022	chr11	9522663	9522663	C	T	exonic	ZNF143	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs572827042	chr11	9537864	9537864	G	A	exonic	ZNF143	synonymous	LIHC\|1\|373\|0.00268
-	chr11	9530252	9530252	A	G	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9496106	9496106	G	T	exonic	ZNF143	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr11	9516249	9516249	G	C	exonic	ZNF143	nonsynonymous	BRCA\|1\|982\|0.00102
rs768865975	chr11	9494253	9494253	G	A	exonic	ZNF143	nonsynonymous	CESC\|1\|194\|0.00515
-	chr11	9500008	9500008	G	T	exonic	ZNF143	nonsynonymous	LUAD\|1\|543\|0.00184
rs753018534	chr11	9494303	9494303	A	G	exonic	ZNF143	synonymous	BRCA\|1\|982\|0.00102
-	chr11	9517878	9517878	G	A	exonic	ZNF143	nonsynonymous	UCEC\|1\|248\|0.00403
rs755828348	chr11	9500066	9500066	G	A	exonic	ZNF143	nonsynonymous	PRAD\|1\|499\|0.00200
rs758575257	chr11	9492877	9492877	C	T	exonic	ZNF143	stopgain	PRAD\|1\|499\|0.00200
rs766025125	chr11	9494268	9494268	G	A	exonic	ZNF143	nonsynonymous	BRCA\|1\|982\|0.00102
rs563295110	chr11	9492960	9492960	C	T	exonic	ZNF143	synonymous	UCEC\|1\|248\|0.00403
-	chr11	9534124	9534124	C	A	exonic	ZNF143	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr11	9546958	9546958	C	G	intronic	ZNF143	unknown	BRCA\|1\|982\|0.00102
-	chr11	9534078	9534078	G	A	exonic	ZNF143	nonsynonymous	SKCM\|1\|368\|0.00272
rs763052310	chr11	9534059	9534059	C	T	exonic	ZNF143	synonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr11	9546829	9546829	T	C	exonic	ZNF143	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr11	9496141	9496141	G	C	exonic	ZNF143	nonsynonymous	BLCA\|1\|396\|0.00253
rs768165831	chr11	9519279	9519279	C	T	exonic	ZNF143	nonsynonymous	SKCM\|1\|368\|0.00272
rs373920789	chr11	9519250	9519250	T	G	exonic	ZNF143	synonymous	KIPAN\|1\|799\|0.00125,KIRP\|1\|282\|0.00355
rs762077968	chr11	9492923	9492923	C	T	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr11	9546908	9546908	C	T	exonic	ZNF143	nonsynonymous	BLCA\|2\|396\|0.00505
-	chr11	9492969	9492969	T	C	splicing	ZNF143	splicing	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr11	9530358	9530358	A	C	exonic	ZNF143	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr11	9496156	9496156	G	T	exonic	ZNF143	nonsynonymous	UCEC\|1\|248\|0.00403
-	chr11	9522664	9522664	G	A	exonic	ZNF143	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr11	9534020	9534020	G	T	exonic	ZNF143	synonymous	LUAD\|1\|543\|0.00184
-	chr11	9537812	9537812	G	T	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9494299	9494299	T	C	exonic	ZNF143	nonsynonymous	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204
-	chr11	9517924	9517924	A	G	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
-	chr11	9499989	9499989	A	T	exonic	ZNF143	synonymous	LIHC\|1\|373\|0.00268
-	chr11	9530309	9530309	A	G	exonic	ZNF143	nonsynonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
rs745311143	chr11	9537807	9537807	G	A	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
-	chr11	9549107	9549107	A	G	exonic	ZNF143	nonsynonymous	HNSC\|1\|512\|0.00195
rs765948286	chr11	9547007	9547007	C	T	intronic	ZNF143	unknown	BRCA\|1\|982\|0.00102
-	chr11	9495562	9495562	C	A	exonic	ZNF143	nonsynonymous	LUAD\|1\|543\|0.00184
-	chr11	9501082	9501082	A	-	exonic	ZNF143	frameshift	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr11	9499976	9499976	A	G	exonic	ZNF143	nonsynonymous	BLCA\|2\|396\|0.00505
-	chr11	9492911	9492911	G	A	exonic	ZNF143	nonsynonymous	HNSC\|1\|512\|0.00195
-	chr11	9522758	9522758	G	A	exonic	ZNF143	nonsynonymous	LIHC\|1\|373\|0.00268
-	chr11	9522699	9522699	C	T	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
rs761035816	chr11	9494252	9494252	C	T	exonic	ZNF143	synonymous	LIHC\|1\|373\|0.00268
rs758635813	chr11	9499964	9499964	C	T	exonic	ZNF143	nonsynonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
rs768692523	chr11	9522711	9522711	C	T	exonic	ZNF143	synonymous	GBMLGG\|1\|820\|0.00122,LGG\|1\|530\|0.00189
-	chr11	9530356	9530356	C	T	exonic	ZNF143	synonymous	UCEC\|1\|248\|0.00403
-	chr11	9530248	9530248	C	T	exonic	ZNF143	synonymous	SKCM\|1\|368\|0.00272
-	chr11	9522759	9522759	A	C	exonic	ZNF143	synonymous	STAD\|1\|395\|0.00253,STES\|1\|395\|0.00253
-	chr11	9516304	9516304	C	T	exonic	ZNF143	nonsynonymous	LUSC\|1\|178\|0.00562
-	chr11	9537756	9537756	A	G	exonic	ZNF143	nonsynonymous	COADREAD\|1\|489\|0.00204,READ\|1\|122\|0.00820
-	chr11	9516259	9516259	C	T	exonic	ZNF143	stopgain	COAD\|1\|367\|0.00272,COADREAD\|1\|489\|0.00204,UCEC\|1\|248\|0.00403
-	chr11	9522776	9522776	C	T	exonic	ZNF143	nonsynonymous	PRAD\|1\|499\|0.00200

TF name:	ZNF143
TF family:	zf-C2H2
Ensembl gene ID:	ENSG00000166478
Ensembl protein ID:	ENSP00000379849, ENSP00000379843, ENSP00000299606, ENSP00000379847, ENSP00000432154
Entrez gene ID:	7702

Database name	Link	Database name	Link
NCBI Gene:		Genecards:
Uniprot:		Wikipedia:
Cosmic 3D:		Geneontology:
CCLE:

GO_term_name	GO_term_type	TF_name
GO_REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_III_PROMOTER	BP	ZNF143
GO_TRANSCRIPTION_FROM_RNA_POLYMERASE_III_PROMOTER	BP	ZNF143

TF information

TCGA somatic mutations and clinical variants of ZNF143

Survival analysis of ZNF143

Expression of ZNF143