Sample ID | Biosample type | Tissue type | Biosample name | TF Frequency |
---|---|---|---|---|
Sample_01_022 | Cell line | Prostate | C4-2B | 0.61904761904762 |
Sample_02_161 | Cell line | Brain | U87 | 0.2 |
Sample_02_285 | Cell line | Liver | HuH7_untreat | 0.22648083623693 |
Sample ID | Tissue type | Biosample type | Biosample name |
---|---|---|---|
Sample_01_022 | Prostate | Cell line | C4-2B |
rsID | Chr | Start | Stop | Ref | Alt | Gene_region | Gene_symble | Effect | TCGA_Occurrence |
---|---|---|---|---|---|---|---|---|---|
- | chr11 | 34502395 | 34502395 | C | T | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr11 | 34502402 | 34502402 | A | G | exonic | ELF5 | synonymous | ESCA|1|185|0.00541 |
- | chr11 | 34502506 | 34502506 | T | G | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr11 | 34502384 | 34502384 | T | A | exonic | ELF5 | synonymous | HNSC|1|512|0.00195 |
rs368376316 | chr11 | 34527231 | 34527231 | C | T | exonic | ELF5 | synonymous | TGCT|1|155|0.00645 |
rs750089040 | chr11 | 34501823 | 34501823 | C | T | exonic | ELF5 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr11 | 34502418 | 34502418 | C | T | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
rs367861770 | chr11 | 34515065 | 34515065 | C | T | exonic | ELF5 | nonsynonymous | GBMLGG|1|820|0.00122,LGG|1|530|0.00189 |
- | chr11 | 34504039 | 34504039 | A | G | exonic | ELF5 | synonymous | UCEC|1|248|0.00403 |
- | chr11 | 34502425 | 34502425 | C | T | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr11 | 34501801 | 34501801 | T | C | exonic | ELF5 | synonymous | SKCM|1|368|0.00272 |
- | chr11 | 34515223 | 34515223 | T | C | exonic | ELF5 | nonsynonymous | HNSC|1|512|0.00195 |
- | chr11 | 34533107 | 34533107 | G | A | exonic | ELF5 | synonymous | CESC|1|194|0.00515 |
- | chr11 | 34502351 | 34502351 | T | A | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr11 | 34527248 | 34527248 | A | G | exonic | ELF5 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr11 | 34502436 | 34502436 | C | T | exonic | ELF5 | stopgain | SKCM|1|368|0.00272 |
- | chr11 | 34515034 | 34515034 | C | T | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204,STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr11 | 34515128 | 34515128 | T | A | exonic | ELF5 | nonsynonymous | LIHC|1|373|0.00268 |
- | chr11 | 34504029 | 34504029 | A | C | exonic | ELF5 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr11 | 34515199 | 34515199 | T | A | exonic | ELF5 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr11 | 34502374 | 34502374 | C | T | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr11 | 34533114 | 34533114 | C | T | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
rs200848772 | chr11 | 34515066 | 34515066 | G | A | exonic | ELF5 | synonymous | LAML|1|197|0.00508 |
rs778628535 | chr11 | 34515068 | 34515068 | C | T | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr11 | 34502479 | 34502479 | C | T | exonic | ELF5 | nonsynonymous | COADREAD|1|489|0.00204,READ|1|122|0.00820 |
rs759245139 | chr11 | 34502410 | 34502410 | G | A | exonic | ELF5 | nonsynonymous | SKCM|2|368|0.00543 |
- | chr11 | 34502381 | 34502381 | C | A | exonic | ELF5 | nonsynonymous | UCEC|1|248|0.00403 |
- | chr11 | 34503985 | 34503985 | A | G | exonic | ELF5 | synonymous | UCEC|1|248|0.00403 |
rs756495257 | chr11 | 34533099 | 34533099 | G | A | exonic | ELF5 | synonymous | SKCM|1|368|0.00272 |
- | chr11 | 34501772 | 34501772 | T | G | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
- | chr11 | 34515144 | 34515144 | G | A | exonic | ELF5 | synonymous | ESCA|1|185|0.00541 |
- | chr11 | 34533109 | 34533109 | G | A | exonic | ELF5 | nonsynonymous | SKCM|1|368|0.00272 |
- | chr11 | 34527247 | 34527247 | C | T | exonic | ELF5 | nonsynonymous | COAD|1|367|0.00272,COADREAD|1|489|0.00204 |
rs376593969 | chr11 | 34515211 | 34515211 | C | T | exonic | ELF5 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr11 | 34527192 | 34527192 | G | T | exonic | ELF5 | synonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr11 | 34502322 | 34502322 | A | G | exonic | ELF5 | nonsynonymous | STAD|1|395|0.00253,STES|1|395|0.00253 |
- | chr11 | 34515184 | 34515184 | C | T | exonic | ELF5 | nonsynonymous | GBM|1|290|0.00345,GBMLGG|1|820|0.00122 |
- | chr11 | 34511593 | 34511593 | A | - | exonic | ELF5 | frameshift | LIHC|1|373|0.00268 |
- | chr11 | 34502435 | 34502435 | C | T | exonic | ELF5 | stopgain | SKCM|1|368|0.00272 |
TF_name | Disease_name | Disease_class | Disease_semantic_type | TF_disease_source |
---|
pathway_ID | pathway_name | pathway_source | gene_number | edge_number |
---|---|---|---|---|
pathway0001604 | PDGF signaling pathway | panther | 113 | 1684 |
GO_term_name | GO_term_type | TF_name |
---|---|---|
GO_SOMATIC_STEM_CELL_POPULATION_MAINTENANCE | BP | ELF5 |
GO_MAMMARY_GLAND_EPITHELIUM_DEVELOPMENT | BP | ELF5 |
GO_MAMMARY_GLAND_EPITHELIAL_CELL_DIFFERENTIATION | BP | ELF5 |
GO_ECTODERM_DEVELOPMENT | BP | ELF5 |
GO_CELL_FATE_COMMITMENT_INVOLVED_IN_FORMATION_OF_PRIMARY_GERM_LAYER | BP | ELF5 |
GO_CELL_PROLIFERATION | BP | ELF5 |
GO_GASTRULATION | BP | ELF5 |
GO_CELL_FATE_COMMITMENT | BP | ELF5 |
GO_NEGATIVE_REGULATION_OF_CELL_DIFFERENTIATION | BP | ELF5 |
GO_DOUBLE_STRANDED_DNA_BINDING | MF | ELF5 |