Lnc Analysis

Paste a list:

File upload:

Example of upload file

Min: Background:

Max:

P-value:

BH:

Bonferroni:

*Tips

LncSEA provides the differential lncRNAs (log2FC>1, P<0.05) of breast invasive carcinoma from TCGA project as input example list file and selects recommended category options for analysis. Users can also set different thresholds as needed for analysis, such as hypergeometric test p value and adjust p value. User can obtain the analysis results within a short time and download results (files and graphs) as needed.

	Select all
	LncRNADisease		MNDR
	Lnc2Cancer		EVLncRNAs

	Select all
	Adrenocortical carcinoma		Breast Carcinoma
	Carcinoma of bladder		Cervical Squamous Cell Carcinoma
	Colon Carcinoma		Colorectal Carcinoma
	Cutaneous Melanoma		Endometrial Carcinoma
	Esophageal carcinoma		Glioblastoma
	Glioma		Leukemia
	Liver carcinoma		Lung adenocarcinoma
	Lung squamous cell carcinoma		Malignant neoplasm of colon with rectum
	Mesothelioma		Ovarian Serous Adenocarcinoma
	Pancreatic carcinoma		Pheochromocytoma and Paraganglioma
	Prostate carcinoma		Renal Cell Carcinoma
	Sarcoma		Squamous cell carcinoma of the head and neck
	Stomach Carcinoma		Testicular Germ Cell Tumor
	Uveal melanoma		Thyroid carcinoma

	Select all
	Overlap		Proximal
	Closest

	Select all
	Overlap		Proximal
	Closest		Closest active

	Select all
	Overlap		Proximal
	Closest

	Select all
	Enhancer		Accessible Chromatin
	Promoter_2kb/1kb		Promoter_5kb/1kb
	Promoter_10kb/1kb		Promoter_20kb/1kb

	Select all
	StarBase		LncBase

	Select all
	RNALocate		iLoc-lncRNA

	Select all
	RNAInter		EuRBPDB
	StarBase

	Select all
	sorf.org		SmProt