CR overview
CR: ATRX
Accession: P46100
Protein names: Transcriptional regulator ATRX
Function type: Histone Modifier,Chromatin Remodeler
Histone type: Unkown
Methytor type: Unkown
Aliases: JMS; SHS; XH2; XNP; ATR2; SFM1; MRX52; RAD54; MRXHF1; RAD54L; ZNF-HX
PMID: 28666128 31631027 34162889
Disease: 36
Go term: 45
Pathway: --
Hallmark: 1
Super Enhancer:

Enhancer:

chrX:77039760-77041460 chrX:77394420-77395050 chrX:77317500-77318110 chrX:77319930-77322250 chrX:77323580-77326050 chrX:77359900-77362380 chrX:77436700-77437440 chrX:77442420-77443620 chrX:77445610-77447840 chrX:77166330-77168650 chrX:77192270-77194390 chrX:77422480-77423930 chrX:77363370-77364040

Promoter:

chrX:77784233-77788233

 ChIP-seq based regulatory details of ATRX
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_02_0288 ATRX cell line HepG2 SRR14107092 GSE170713 GEO
CR_02_0914 ATRX SKNFI ATRX wild-type metastatic neuroblastoma SRR7828553 GSE100148 GEO
CR_02_0915 ATRX SKNMM ATRX in-frame fusion metastatic neuroblastoma SRR7828555 GSE100148 GEO
CR_02_0916 ATRX CHLA90 ATRX in-frame fusion metastatic neuroblastoma SRR7828558 GSE100148 GEO
CR_02_1487 ATRX cell line HepG2 SRR14107091 GSE170713 GEO
 Downstream target genes of ATRX
 Protein-protein interaction of ATRX
 Annotation of ATRX
 TCGA cancer survival map of ATRX


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
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Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
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Reset The plot is based on the datasets of list.