CR overview
| CR: | KDM6A | |
| Accession: | O15550 | |
| Protein names: | Lysine-specific demethylase 6A | |
| Function type: | Histone Modifier | |
| Histone type: | Eraser | |
| Methytor type: | Unkown | |
| Aliases: | CHD8, MLL2/3, MLL4/WBP7, COMPASS-like MLL3,4;lysine (K)-specific demethylase (KDM);Histone demethylases;Jumonji | |
| PMID: | 30872525 34006303 29533787 32427586 34262032 | |
| Disease: | 25 | |
| Go term: | 26 | |
| Pathway: | 3 | |
| Hallmark: | -- | |
| Super Enhancer: | chrX:44731248-44734509 chrX:44807027-44834860 chrX:44731103-44781241 chrX:44730125-44735256 chrX:44730171-44924830 chrX:44730140-44951970 chrX:44730138-44981457 chrX:44732386-44827656 |
|
| Enhancer: |
chrX:44732960-44733160 chrX:44733230-44734820 chrX:44401350-44402050 chrX:44761990-44763020 chrX:44832550-44833910 chrX:44833960-44835890 chrX:45031920-45032870 chrX:44794840-44795730 chrX:44868070-44870200 chrX:44856160-44856930 chrX:44866110-44867620 chrX:44756820-44759190 chrX:44810770-44812970 |
|
| Promoter: |
chrX:44871188-44875188 |
ChIP-seq based regulatory details of KDM6A
| Sample ID | CR | Biosample type | Biosample term name | File accession | Experiment accession | Source |
|---|---|---|---|---|---|---|
| CR_01_0483 | KDM6A | cell line | HepG2 | ENCFF599YZI | ENCSR031ING | Encode |
| CR_01_0552 | KDM6A | cell line | HepG2 | ENCFF767XIJ | ENCSR031ING | Encode |
| CR_02_1070 | KDM6A | Human Neural Stem Cells H9 | Human Neural Stem Cells H9 | SRR8646535 | GSE127515 | GEO |
| CR_02_1071 | KDM6A | Human Neural Stem Cells H9 | Human Neural Stem Cells H9 | SRR8646536 | GSE127512 | GEO |
| CR_02_1414 | KDM6A | cell line | bone marrow nuclear cells | SRR8356431 | GSE108976 | GEO |
| CR_02_1415 | KDM6A | cell line | bone marrow nuclear cells | SRR8356433 | GSE108976 | GEO |
| CR_02_1416 | KDM6A | cell line | bone marrow nuclear cells | SRR8356435 | GSE108976 | GEO |
| CR_02_1417 | KDM6A | cell line | peripheral blood nuclear cells | SRR8356437 | GSE108976 | GEO |
Downstream target genes of KDM6A
Upstream regulatory details of KDM6A
Protein-protein interaction of KDM6A
Annotation of KDM6A
TCGA cancer survival map of KDM6A
Other information of KDM6A