CR overview
CR: KDM5C
Accession: P41229
Protein names: [Histone H3]-trimethyl-L-lysine(4) demethylase (EC 1.14.11.67)
Function type: Histone Modifier
Histone type: Eraser
Methytor type: Unkown
Aliases: lysine (K)-specific demethylase (KDM);Histone demethylases;Jumonji
PMID: 31221981 34522206 33953726
Disease: 12
Go term: 14
Pathway: 1
Hallmark: --
Super Enhancer:

chrX:53222146-53231177 chrX:53222134-53231163 chrX:53290854-53317648

Enhancer:

chrX:53123470-53123580 chrX:53265680-53266880 chrX:53308840-53310670 chrX:53421810-53423140 chrX:53440390-53441700 chrX:53441820-53441920 chrX:53460830-53461260 chrX:53117730-53118330 chrX:53442120-53442770 chrX:53224250-53224410 chrX:53284110-53284980 chrX:53459360-53460660 chrX:53011890-53013900 chrX:53022750-53024480 chrX:53112490-53113720 chrX:53291760-53293520 chrX:53294500-53295500 chrX:53223920-53224110 chrX:53268480-53269400 chrX:52881100-52882970 chrX:53123660-53125750 chrX:52933750-52935790 chrX:53347550-53349610 chrX:53296250-53298660 chrX:52893930-52895440 chrX:53308350-53308740 chrX:53018240-53020010 chrX:53115490-53116950 chrX:53280360-53282770 chrX:53278060-53279460 chrX:53399720-53401060 chrX:53240040-53240670 chrX:53240840-53240960 chrX:53503350-53504390 chrX:53008840-53010970 chrX:53217530-53219640

Promoter:

chrX:53223422-53227422

 ChIP-seq based regulatory details of KDM5C
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_02_1250 KDM5C Tissue kidney SRR2470293 GSE73267 GEO
CR_02_1251 KDM5C Tissue kidney SRR2470294 GSE73267 GEO
CR_02_1252 KDM5C Tissue kidney SRR2470295 GSE73267 GEO
CR_02_1253 KDM5C Tissue kidney SRR2470296 GSE73267 GEO
 Downstream target genes of KDM5C
 Protein-protein interaction of KDM5C
 Annotation of KDM5C
 TCGA cancer survival map of KDM5C


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.