CR overview
CR: KDM5B
Accession: Q9UGL1
Protein names: Lysine-specific demethylase 5B
Function type: Histone Modifier
Histone type: Eraser
Methytor type: Unkown
Aliases: lysine (K)-specific demethylase (KDM);Histone demethylases;Jumonji
PMID: 34671158 30448242 32868382 35217626
Disease: 3
Go term: 31
Pathway: 1
Hallmark: --
Super Enhancer:

chr1:202774940-202781425 chr1:202769622-202814205 chr1:202774913-202807500 chr1:202774000-202808972 chr1:202774937-202822335 chr1:202749934-202781880 chr1:202774978-202791100 chr1:202764740-202781330 chr1:202773052-202781084 chr1:202773051-202778007 chr1:202772589-202791614

Enhancer:

chr1:203113490-203114440 chr1:203115840-203118260 chr1:203122160-203124140 chr1:202557700-202559720 chr1:202887520-202888880 chr1:202889040-202889980 chr1:202894340-202896220 chr1:202936030-202936310 chr1:202957730-202959390 chr1:203026080-203028300 chr1:202536950-202538270 chr1:202933820-202934490 chr1:202956790-202957570 chr1:203044890-203045460 chr1:203186500-203186860 chr1:202709940-202710490 chr1:202951890-202953840 chr1:202718270-202719780 chr1:202364610-202365680 chr1:202677940-202679380 chr1:203086260-203088260 chr1:203098310-203100180 chr1:202774440-202775070 chr1:203021010-203022880 chr1:203097060-203097400 chr1:203141170-203143550 chr1:202782550-202784380 chr1:202934630-202935010 chr1:202935730-202935870 chr1:203124300-203126120 chr1:202568480-202569480 chr1:202567030-202568340 chr1:202709060-202709800 chr1:203053160-203053770 chr1:203097560-203097910 chr1:203155470-203155720 chr1:203023090-203024550 chr1:203025640-203025910 chr1:203053860-203054610 chr1:203151980-203152760 chr1:203154510-203155440 chr1:202425410-202426520 chr1:202473820-202475730 chr1:202770460-202770630 chr1:202771990-202773010 chr1:203121400-203122100 chr1:203166340-203167830 chr1:202249980-202251910 chr1:202252280-202253520 chr1:202260980-202262160 chr1:202263530-202265900 chr1:202318270-202319970 chr1:202320460-202321250 chr1:202366840-202367980 chr1:202378980-202381400 chr1:203102440-203103700 chr1:203171350-203172600 chr1:202308580-202311020 chr1:202375000-202377380 chr1:202802670-202804010 chr1:202813520-202815050 chr1:202935120-202935650 chr1:203036920-203037580 chr1:201924680-201926410 chr1:201979950-201980250 chr1:201980430-201981080 chr1:201981310-201981470 chr1:201982160-201982300 chr1:201982430-201982950 chr1:201983150-201984330 chr1:201986320-201988780 chr1:202000300-202000950 chr1:202002820-202005290 chr1:202005880-202006540 chr1:202006640-202008850 chr1:202009180-202011360 chr1:202012390-202012900 chr1:202433060-202434220 chr1:202434260-202436330 chr1:201997740-202000060 chr1:201981890-201982070 chr1:202913070-202914110 chr1:202949400-202951580 chr1:202921280-202923100 chr1:202923440-202924660 chr1:202925050-202927040 chr1:202932860-202933730 chr1:202712170-202713540 chr1:202719910-202722030 chr1:202253840-202254150 chr1:202452200-202453740 chr1:202500590-202501960 chr1:202691920-202693380 chr1:202499320-202500380 chr1:202502460-202502970 chr1:203183180-203185200 chr1:202758760-202759100 chr1:203109290-203111320 chr1:203030800-203032950 chr1:203136530-203136930 chr1:203137220-203137750 chr1:203137800-203138030 chr1:203138220-203138380 chr1:203139580-203140180 chr1:203140710-203141070 chr1:203143730-203144450 chr1:203144590-203144670 chr1:203192790-203194170 chr1:203256960-203257110 chr1:203194230-203194790 chr1:202483150-202485300

Promoter:

chr1:202806487-202810487

 ChIP-seq based regulatory details of KDM5B
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
CR_01_0031 KDM5B cell line K562 ENCFF000CBH ENCSR000AQA Encode
CR_01_0032 KDM5B cell line K562 ENCFF000CBM ENCSR000AQA Encode
CR_01_0311 KDM5B cell line K562 ENCFF137VMP ENCSR000AQA Encode
CR_01_0625 KDM5B cell line K562 ENCFF900XIK ENCSR000AQA Encode
CR_02_0269 KDM5B cell line HepG2 SRR14103259 GSE169884 GEO
CR_02_0270 KDM5B cell line HepG2 SRR14103260 GSE169884 GEO
CR_02_0654 KDM5B cell line H1-Hesc SRR5832721 GSE101045 GEO
CR_02_0655 KDM5B cell line H1-Hesc SRR5832722 GSE101045 GEO
 Downstream target genes of KDM5B
 Protein-protein interaction of KDM5B
 Annotation of KDM5B
 TCGA cancer survival map of KDM5B


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.