CR overview
| CR: | KDM1A | |
| Accession: | O60341 | |
| Protein names: | Lysine-specific histone demethylase 1A | |
| Function type: | Histone Modifier | |
| Histone type: | Eraser | |
| Methytor type: | Unkown | |
| Aliases: | NuRD, BHC, SCL;lysine (K)-specific demethylase (KDM);DNA methyltransferases;Jumonji;Jumonji | |
| PMID: | 34655521 29502954 31801559 33414108 | |
| Disease: | 8 | |
| Go term: | 60 | |
| Pathway: | 8 | |
| Hallmark: | 2 | |
| Super Enhancer: | chr1:23323375-23337941 |
|
| Enhancer: |
chr1:23783200-23784670 chr1:23377010-23378130 chr1:23401560-23403720 chr1:23403850-23405080 chr1:23743880-23744390 chr1:23339980-23340370 chr1:23347340-23348850 chr1:23370980-23373130 chr1:23064410-23065500 chr1:23065820-23067950 chr1:23072130-23074580 chr1:23076240-23078570 chr1:23194720-23196210 chr1:23196260-23198210 chr1:23198290-23199040 chr1:23580240-23581840 chr1:23440800-23441430 chr1:23393350-23395030 chr1:23763150-23763400 chr1:23763540-23763620 chr1:23778020-23779180 chr1:23408070-23408180 chr1:23015680-23016770 chr1:23060440-23062850 chr1:23206000-23207200 chr1:23448610-23449830 chr1:23718380-23720370 chr1:23720520-23722930 chr1:23726820-23727770 chr1:23737640-23738710 chr1:23079600-23081710 chr1:23450080-23450380 chr1:23668310-23670700 chr1:23775660-23776250 chr1:23777130-23777970 chr1:23808910-23810490 chr1:23874540-23876500 chr1:23905520-23906050 chr1:23914230-23914530 chr1:23930110-23932100 chr1:23854910-23857030 chr1:23130930-23132790 chr1:23199080-23200560 chr1:23337600-23338370 chr1:23803890-23804660 chr1:23850980-23853420 chr1:23884910-23885420 chr1:23999130-24001000 chr1:23383590-23383970 chr1:23384060-23385560 chr1:23779260-23780700 chr1:23637560-23637690 chr1:23756720-23757100 chr1:23140800-23143270 chr1:23915490-23917610 chr1:23987970-23989050 chr1:23466780-23468140 chr1:22714370-22716590 chr1:22778500-22779150 chr1:22824850-22825260 chr1:23444960-23446950 |
|
| Promoter: |
chr1:23017443-23021443 |
ChIP-seq based regulatory details of KDM1A
| Sample ID | CR | Biosample type | Biosample term name | File accession | Experiment accession | Source |
|---|---|---|---|---|---|---|
| CR_01_0298 | KDM1A | cell line | GM12878 | ENCFF100FQP | ENCSR391IWM | Encode |
| CR_01_0341 | KDM1A | cell line | HepG2 | ENCFF215QNG | ENCSR115BLD | Encode |
| CR_01_0379 | KDM1A | cell line | HepG2 | ENCFF300QMB | ENCSR087NSR | Encode |
| CR_01_0404 | KDM1A | cell line | A549 | ENCFF360YKR | ENCSR639GWS | Encode |
| CR_01_0407 | KDM1A | cell line | A549 | ENCFF372SMO | ENCSR639GWS | Encode |
| CR_01_0546 | KDM1A | cell line | HepG2 | ENCFF750VZA | ENCSR115BLD | Encode |
| CR_01_0589 | KDM1A | cell line | HepG2 | ENCFF842KVM | ENCSR087NSR | Encode |
| CR_01_0653 | KDM1A | cell line | GM12878 | ENCFF965ZWE | ENCSR391IWM | Encode |
| CR_01_0663 | KDM1A | cell line | HepG2 | ENCFF989EPR | ENCSR115BLD | Encode |
| CR_01_0696 | KDM1A | cell line | K562 | ENCFF000CAF | ENCSR000ATX | Encode |
| CR_01_0888 | KDM1A | cell line | K562 | ENCFF084AGF | ENCSR000ATX | Encode |
| CR_01_0906 | KDM1A | cell line | H1-hESC | ENCFF220HNB | ENCSR418RRF | Encode |
| CR_01_0914 | KDM1A | cell line | K562 | ENCFF249VOJ | ENCSR000ATX | Encode |
| CR_01_0949 | KDM1A | cell line | H1-hESC | ENCFF503DAG | ENCSR418RRF | Encode |
| CR_01_0954 | KDM1A | cell line | K562 | ENCFF519FAZ | ENCSR000ATX | Encode |
| CR_01_0996 | KDM1A | cell line | H1-hESC | ENCFF935HUK | ENCSR418RRF | Encode |
| CR_02_0161 | KDM1A | cell line | HCT116 | SRR11969011 | GSE152144 | GEO |
| CR_02_0162 | KDM1A | cell line | HCT116 | SRR11969012 | GSE152144 | GEO |
| CR_02_0163 | KDM1A | cell line | HCT116 | SRR11969013 | GSE152144 | GEO |
| CR_02_0457 | KDM1A | cell line | SK-NO-1 | SRR2145665 | GSE71739 | GEO |
| CR_02_0458 | KDM1A | cell line | SK-NO-1 | SRR2145666 | GSE71739 | GEO |
| CR_02_0459 | KDM1A | cell line | SK-NO-1 | SRR2145667 | GSE71741 | GEO |
| CR_02_0460 | KDM1A | cell line | Kasumi-1 | SRR2145671 | GSE71739 | GEO |
| CR_02_0461 | KDM1A | cell line | Kasumi-1 | SRR2145672 | GSE71741 | GEO |
| CR_02_0462 | KDM1A | cell line | Kasumi-1 | SRR2145673 | GSE71739 | GEO |
| CR_02_0606 | KDM1A | cell line | GM12878 | SRR5832680 | GSE101029 | GEO |
| CR_02_0607 | KDM1A | cell line | GM12878 | SRR5832681 | GSE101029 | GEO |
| CR_02_0676 | KDM1A | cell line | H1-Hesc | SRR5832799 | GSE101150 | GEO |
| CR_02_0677 | KDM1A | cell line | H1-Hesc | SRR5832800 | GSE101150 | GEO |
| CR_02_0678 | KDM1A | cell line | H1-Hesc | SRR5832801 | GSE101150 | GEO |
| CR_02_0687 | KDM1A | cell line | A549 | SRR5832920 | GSE101243 | GEO |
| CR_02_1284 | KDM1A | cell line | HepG2 | SRR5111481 | GSE91697 | GEO |
| CR_02_1285 | KDM1A | cell line | HepG2 | SRR5111482 | GSE91697 | GEO |
| CR_02_1312 | KDM1A | cell line | K562 | SRR5112249 | GSE92153 | GEO |
| CR_02_1313 | KDM1A | cell line | K562 | SRR5112250 | GSE92153 | GEO |
Downstream target genes of KDM1A
Upstream regulatory details of KDM1A
Protein-protein interaction of KDM1A
Annotation of KDM1A
TCGA cancer survival map of KDM1A
Other information of KDM1A