CR overview
CR: HDAC5
Accession: Q9UQL6
Protein names: Histone deacetylase (EC 3.5.1.98)
Function type: Histone Modifier
Histone type: Eraser
Methytor type: Unkown
Aliases: Histone deacetylase (HDAC);Histone deacetylases;HDAC
PMID: 32612176 33419772 33414476
Disease: 15
Go term: 40
Pathway: 8
Hallmark: 2
Super Enhancer:

chr17:42172207-42184111 chr17:42172460-42202032 chr17:42172515-42201868 chr17:42172564-42201927 chr17:42172393-42201886 chr17:42172165-42202026 chr17:42172167-42201933 chr17:42172662-42201708 chr17:42172516-42217099 chr17:42172363-42201885 chr17:42172312-42202086 chr17:42172499-42201872 chr17:42172410-42201936 chr17:42172404-42202048 chr17:42172356-42202122 chr17:42172290-42202038 chr17:42158830-42216727 chr17:42163232-42202482 chr17:42158854-42216672 chr17:42161535-42202226 chr17:42172355-42201818 chr17:42172482-42201868 chr17:42172241-42202118 chr17:42172429-42201919 chr17:42172335-42202030 chr17:42172331-42201826 chr17:42172342-42201979 chr17:42158921-42189517 chr17:42163195-42189415 chr17:42159570-42189188 chr17:42158905-42189546 chr17:42163186-42189352 chr17:42163201-42199554 chr17:42172516-42179870 chr17:42155760-42187333 chr17:42184710-42202499 chr17:42184868-42202079 chr17:42163238-42202105 chr17:42172242-42202050 chr17:42172181-42202216 chr17:42172228-42202121 chr17:42163526-42202287 chr17:42163208-42202371 chr17:42164219-42189601 chr17:42161335-42181237 chr17:42172628-42201791 chr17:42170203-42193404 chr17:42171986-42192785 chr17:42172171-42202222 chr17:42166462-42200829 chr17:42163138-42189871 chr17:42169265-42188887 chr17:42170270-42189650 chr17:42169979-42193443 chr17:42170235-42192135 chr17:42168714-42188193 chr17:42161602-42191813 chr17:42169704-42189609 chr17:42163138-42189871 chr17:42162966-42193448 chr17:42169003-42202156 chr17:42171121-42202332 chr17:42163437-42184139 chr17:42164158-42174779 chr17:42172359-42220023 chr17:42163323-42224805 chr17:42172191-42226270 chr17:42163270-42224795 chr17:42163309-42224812 chr17:42172245-42219600 chr17:42172009-42220369

Enhancer:

chr17:42163010-42163930 chr17:42164110-42164770 chr17:42165060-42165460 chr17:42188170-42190660 chr17:41909310-41910120 chr17:41955350-41956640 chr17:42091910-42092180 chr17:42161020-42161170 chr17:42255180-42255570 chr17:42280530-42282400 chr17:42295660-42296810 chr17:42328960-42330480 chr17:42428170-42428400 chr17:42462570-42462650 chr17:42462700-42462910 chr17:42463080-42463190 chr17:41910190-41910460 chr17:42090520-42091720 chr17:42141300-42143100 chr17:42430470-42431100 chr17:42452130-42452360 chr17:42452480-42452950 chr17:42453550-42453670 chr17:42453760-42454370 chr17:42461950-42462310 chr17:42462440-42462530 chr17:42192380-42194860 chr17:42198410-42200870 chr17:42463500-42464780 chr17:41561550-41563990 chr17:41790390-41792420 chr17:41867620-41869790 chr17:41983930-41984580 chr17:42195580-42197640 chr17:41975750-41977830 chr17:42400950-42402070 chr17:42294070-42295530 chr17:42089600-42090370 chr17:42427950-42428050 chr17:42427710-42427800 chr17:41928590-41930270 chr17:42155780-42155860 chr17:42161220-42161920 chr17:42394090-42394850 chr17:42428530-42428730 chr17:42428830-42428910 chr17:42458430-42460860 chr17:42463290-42463370 chr17:42392380-42392520 chr17:42392690-42392810 chr17:42392980-42393750 chr17:42393890-42393980 chr17:42018320-42018510 chr17:42158250-42159950 chr17:42160190-42160910 chr17:42540690-42541830 chr17:42153710-42154120 chr17:42451840-42452020 chr17:42156030-42156160 chr17:42449790-42451720 chr17:41800380-41802410 chr17:41924630-41924900 chr17:41949030-41950420 chr17:42004290-42005870 chr17:42029140-42030100 chr17:42030350-42030470 chr17:42030560-42030660 chr17:42251210-42253340 chr17:42435820-42436940 chr17:42526950-42527730 chr17:42822840-42824450 chr17:42179850-42182260 chr17:42117620-42119880 chr17:42222620-42224820 chr17:42228410-42229190 chr17:42229650-42230000 chr17:42230150-42231300 chr17:42275100-42275380 chr17:42425030-42426520 chr17:42426670-42426790 chr17:41968650-41971120 chr17:42269100-42269170 chr17:42290310-42290580 chr17:42274460-42274590 chr17:42290650-42293020 chr17:42392190-42392290 chr17:42395240-42395460 chr17:42396040-42396990

Promoter:

chr17:44121702-44125702

 ChIP-seq based regulatory details of HDAC5
Sample ID CR Biosample type Biosample term name File accession Experiment accession Source
 Downstream target genes of HDAC5
 Protein-protein interaction of HDAC5
 Annotation of HDAC5
 TCGA cancer survival map of HDAC5


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.