Promoter region SNP position GWAS ID Ref Alt Gene Disease Source
chr12:48680238-48684238 chr12:48680520 rs7299276 C T C12orf41

TGCT PancanQTL
chr12:48680238-48684238 chr12:48680520 rs7299276 C T ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48680520 rs7299276 C T ENSG00000139620.8_49048724_49048843

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48680830 rs113534893 T C C12orf41

ESCA PancanQTL
chr12:48680238-48684238 chr12:48680830 rs113534893 T C C12orf41

HNSC PancanQTL
chr12:48680238-48684238 chr12:48680830 rs113534893 T C C12orf41

LGG PancanQTL
chr12:48680238-48684238 chr12:48680830 rs113534893 T C VDR

LGG PancanQTL
chr12:48680238-48684238 chr12:48680830 rs113534893 T C C12orf41

THCA PancanQTL
chr12:48680238-48684238 chr12:48680851 rs12830014 G A C12orf41

Whole_Blood Westra2013
chr12:48680238-48684238 chr12:48680851 rs12830014 G A DDX23

Whole_Blood Westra2013
chr12:48680238-48684238 chr12:48680978 rs201957486 C CA ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48680978 rs201957486 C CA ENSG00000139620.8_49075165_49076021

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

BLCA PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

CESC PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

HNSC PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

LAML PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

LGG PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A H1FNT

LGG PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A C12orf41

LUAD PancanQTL
chr12:48680238-48684238 chr12:48680979 rs10875859 C A KANSL2

Artery_Coronary GTEx_v8
chr12:48680238-48684238 chr12:48680979 rs10875859 C A KANSL2

Brain_Cerebellum GTEx_v8
chr12:48680238-48684238 chr12:48680979 rs10875859 C A KANSL2

Esophagus_Mucosa GTEx_v8
chr12:48680238-48684238 chr12:48680979 rs10875859 C A KANSL2

Minor_Salivary_Gland GTEx_v8
chr12:48680238-48684238 chr12:48680979 rs10875859 C A CCNT1

Whole_Blood GTEx_v8
chr12:48680238-48684238 chr12:48682028 rs2277365 G T C12orf41

CESC PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 G T C12orf41

HNSC PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 G T C12orf41

LAML PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 G T C12orf41

LGG PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 G T H1FNT

LGG PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 G T C12orf41

LUAD PancanQTL
chr12:48680238-48684238 chr12:48682028 rs2277365 T G C12orf41

Whole_Blood Westra2013
chr12:48680238-48684238 chr12:48682028 rs2277365 T G ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682028 rs2277365 T G ENSG00000139620.8_49075165_49076021

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682200 rs61942052 C G C12orf41

ESCA PancanQTL
chr12:48680238-48684238 chr12:48682200 rs61942052 C G C12orf41

HNSC PancanQTL
chr12:48680238-48684238 chr12:48682200 rs61942052 C G C12orf41

LGG PancanQTL
chr12:48680238-48684238 chr12:48682200 rs61942052 C G VDR

LGG PancanQTL
chr12:48680238-48684238 chr12:48682200 rs61942052 C G C12orf41

THCA PancanQTL
chr12:48680238-48684238 chr12:48682201 rs61942053 T G C12orf41

ESCA PancanQTL
chr12:48680238-48684238 chr12:48682201 rs61942053 T G C12orf41

HNSC PancanQTL
chr12:48680238-48684238 chr12:48682201 rs61942053 T G C12orf41

LGG PancanQTL
chr12:48680238-48684238 chr12:48682201 rs61942053 T G VDR

LGG PancanQTL
chr12:48680238-48684238 chr12:48682201 rs61942053 T G C12orf41

THCA PancanQTL
chr12:48680238-48684238 chr12:48682253 rs10783277 T C C12orf41

Whole_Blood Westra2013
chr12:48680238-48684238 chr12:48682253 rs10783277 T C ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682253 rs10783277 T C ENSG00000139620.8_49048724_49048843

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682316 rs2277366 A G C12orf41

TGCT PancanQTL
chr12:48680238-48684238 chr12:48682316 rs2277366 A G C12orf41

Whole_Blood Westra2013
chr12:48680238-48684238 chr12:48682316 rs2277366 A G ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682316 rs2277366 A G ENSG00000139620.8_49048724_49048843

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682999 rs7133756 A G C12orf41

TGCT PancanQTL
chr12:48680238-48684238 chr12:48682999 rs7133756 A G ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48682999 rs7133756 A G ENSG00000139620.8_49048724_49048843

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48683001 rs11168681 A G C12orf41

LAML PancanQTL
chr12:48680238-48684238 chr12:48683001 rs11168681 A G DDX23

Artery_Coronary GTEx_v8
chr12:48680238-48684238 chr12:48683001 rs11168681 A G ENSG00000139620.8_49047185_49047958

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48683001 rs11168681 A G ENSG00000139620.8_49075165_49076021

Lymphoblastoid_EUR_exonlevel Lappalainen2013
chr12:48680238-48684238 chr12:48683001 rs11168681 A G KANSL2

Lymphoblastoid_EUR_genelevel Lappalainen2013