T(co)F Overview
T(co)F: Setd1a
Species: Mus musculus
Knock-Method: shRNA
T(co)F Class: SET
T(co)F Superclass: TcoF-DB_TcoF
Biosample Name: Retina
Tissue Type: Eye
Biosample Type: Tissue
# of Control: 3
# of Treat: 4
Data Source: GEO
Profile ID: GSE154498
Platform: GPL21493
Pubmed ID: 33938913

Setd1a- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of Setd1a
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of Setd1a
Upstream Pathway Annotation of Setd1a
T(co)F Pathway Name Source Gene Number
Setd1a GENERIC_TRANSCRIPTION_PATHWAY REACTOME 842
Setd1a PKMTS_METHYLATE_HISTONE_LYSINES REACTOME 67
Setd1a CHROMATIN_MODIFYING_ENZYMES REACTOME 205
Setd1a GENE_EXPRESSION_TRANSCRIPTION REACTOME 1061
Setd1a TRANSCRIPTIONAL_REGULATION_BY_RUNX1 REACTOME 198
Setd1a RUNX1_REGULATES_GENES_INVOLVED_IN_MEGAKARYOCYTE_DI REACTOME 87
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of Setd1a
T(co)F Expression in Mouse Cell (Fantom5) T(co)F Expression in Mouse Tissue (Fantom5)