| T(co)F: | Smarca4 |
| Species: | Mus musculus |
| Knock-Method: | shRNA |
| T(co)F Class: | Others |
| T(co)F Superclass: | TcoF-DB_TF |
| Biosample Name: | ES cells |
| Tissue Type: | Embryo |
| Biosample Type: | Cell line |
| # of Control: | 1 | # of Treat: | 1 |
| Data Source: | GEO |
| Profile ID: | GSE79655 |
| Platform: | GPL10787 |
| Pubmed ID: | 27154007 |
#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines
| Target Gene | T(co)F | Mean
Expr. of
Control
|
Mean
Expr. of
Treat
|
Fold Change | Log2FC | Rank | P-value | Corrected _P |
Promoter _T(co)F |
SE_T(co)F | TE_T(co)F |
|---|
| T(co)F | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Smarca4 | VDR_PATHWAY | BIOCARTA | 22 |
| Smarca4 | HSWI_SNF_PATHWAY | BIOCARTA | 11 |
| Smarca4 | INTERLEUKIN_7_SIGNALING | REACTOME | 24 |
| Smarca4 | CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM | REACTOME | 404 |
| Smarca4 | IMMUNE_SYSTEM | REACTOME | 1775 |
| Smarca4 | SIGNALING_BY_WNT | REACTOME | 235 |
| Smarca4 | TCF_DEPENDENT_SIGNALING_IN_RESPONSE_TO_WNT | REACTOME | 154 |
| Smarca4 | FORMATION_OF_THE_BETA_CATENIN_TCF_TRANSACTIVATING_ | REACTOME | 23 |
| Smarca4 | GENERIC_TRANSCRIPTION_PATHWAY | REACTOME | 842 |
| Smarca4 | RMTS_METHYLATE_HISTONE_ARGININES | REACTOME | 71 |
| Smarca4 | CHROMATIN_MODIFYING_ENZYMES | REACTOME | 205 |
| Smarca4 | SIGNALING_BY_INTERLEUKINS | REACTOME | 270 |
| Smarca4 | GENE_EXPRESSION_TRANSCRIPTION | REACTOME | 1061 |
| Smarca4 | TRANSCRIPTIONAL_REGULATION_BY_RUNX1 | REACTOME | 198 |
| Smarca4 | RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFE | REACTOME | 35 |
| Smarca4 | MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY | WP | 290 |