| T(co)F: | Smad1 |
| Species: | Mus musculus |
| Knock-Method: | knockout |
| T(co)F Class: | SMAD/NF-1 DNA-binding domain factors |
| T(co)F Superclass: | beta-Hairpin exposed by an alpha/beta-scaffold |
| Biosample Name: | Lung left lobe |
| Tissue Type: | Lung |
| Biosample Type: | Tissue |
| # of Control: | 3 | # of Treat: | 3 |
| Data Source: | GEO |
| Profile ID: | GSE26502 |
| Platform: | GPL1261 |
| Pubmed ID: | 21270055 |
#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines
| Target Gene | T(co)F | Mean
Expr. of
Control
|
Mean
Expr. of
Treat
|
Fold Change | Log2FC | Rank | P-value | Corrected _P |
Promoter _T(co)F |
SE_T(co)F | TE_T(co)F |
|---|
| T(co)F | Pathway Name | Source | Gene Number |
|---|---|---|---|
| Smad1 | CTCF_PATHWAY | BIOCARTA | 24 |
| Smad1 | SIGNALING_BY_BMP | REACTOME | 28 |
| Smad1 | GENERIC_TRANSCRIPTION_PATHWAY | REACTOME | 842 |
| Smad1 | METABOLISM_OF_PROTEINS | REACTOME | 1657 |
| Smad1 | DEUBIQUITINATION | REACTOME | 254 |
| Smad1 | UB_SPECIFIC_PROCESSING_PROTEASES | REACTOME | 184 |
| Smad1 | POST_TRANSLATIONAL_PROTEIN_MODIFICATION | REACTOME | 1310 |
| Smad1 | GENE_EXPRESSION_TRANSCRIPTION | REACTOME | 1061 |
| Smad1 | TRANSCRIPTIONAL_REGULATION_BY_RUNX2 | REACTOME | 63 |
| Smad1 | RUNX2_REGULATES_BONE_DEVELOPMENT | REACTOME | 6 |
| Smad1 | SIGNALING_BY_TGFB_FAMILY_MEMBERS | REACTOME | 101 |
| Smad1 | ID_SIGNALING_PATHWAY | WP | 50 |
| Smad1 | ESC_PLURIPOTENCY_PATHWAYS | WP | 116 |
| Smad1 | TGFBETA_SIGNALING_PATHWAY | WP | 52 |
| Smad1 | HEART_DEVELOPMENT | WP | 46 |
| Smad1 | BMP_SIGNALING_PATHWAY_IN_EYELID_DEVELOPMENT | WP | 20 |
| Smad1 | DELTANOTCH_SIGNALING_PATHWAY | WP | 82 |
| Smad1 | NEURAL_CREST_DIFFERENTIATION | WP | 99 |
| Smad1 | MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY | WP | 290 |