T(co)F Overview
T(co)F: STAT1
Species: Homo sapiens
Knock-Method: knockout
T(co)F Class: STAT domain factors
T(co)F Superclass: Immunoglobulin fold
Biosample Name: Huh-7.5
Tissue Type: Liver
Biosample Type: Cell line
# of Control: 3
# of Treat: 3
Data Source: GEO
Profile ID: GSE84693
Platform: GPL16686
Pubmed ID: 27929099

STAT1- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of STAT1
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of STAT1
Upstream Pathway Annotation of STAT1
T(co)F Pathway Name Source Gene Number
STAT1 Hs_Insulin_signalling_in_adipocytes_(diabetic_condition)_WP3635_86059 WikiPathways 6
STAT1 Hs_Insulin_signalling_in_adipocytes_(normal_condition)_WP3634_86060 WikiPathways 6
STAT1 IFN gamma signaling pathway(JAK1 JAK2 STAT1) ( IFN gamma signaling(JAK1 JAK2 STAT1) ) INOH 6
STAT1 Gene expression of SOCS1 by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) INOH 8
STAT1 Gene expression of SOCS3 by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) INOH 8
STAT1 Hs_One_carbon_metabolism_and_related_pathways_WP3940_91096 WikiPathways 10
STAT1 Interleukin-6 signaling Reactome 11
STAT1 Hs_IL-9_Signaling_Pathway_WP22_79264 WikiPathways 11
STAT1 IL-5 signaling pathway(JAK1 JAK2 STAT1 STAT5) ( IL-5 signaling(JAK1 JAK2 STAT1 STAT5) ) INOH 11
STAT1 Hs_PDGF_Pathway_WP2526_82681 WikiPathways 12
STAT1 EPO signaling pathway(JAK2 STAT1 STAT3 STAT5) ( EPO signaling pathway(JAK2 STAT1 STAT3 STAT5) ) INOH 12
STAT1 Regulation of IFNG signaling Reactome 14
STAT1 Gene expression of SOCS by STAT dimer ( JAK-STAT pathway and regulation pathway Diagram ) INOH 14
STAT1 JAK/STAT signaling pathway PANTHER 15
STAT1 Hs_Interleukin-11_Signaling_Pathway_WP2332_79525 WikiPathways 17
STAT1 Signaling by cytosolic FGFR1 fusion mutants Reactome 18
STAT1 IFN alpha signaling pathway(JAK1 TYK2 STAT1) ( IFN alpha signaling(JAK1 TYK2 STAT1 STAT2 STAT3) ) INOH 18
STAT1 IFN alpha signaling pathway(JAK1 TYK2 STAT1 STAT3) ( IFN alpha signaling(JAK1 TYK2 STAT1 STAT2 STAT3) ) INOH 19
STAT1 IFN alpha signaling pathway((JAK1 TYK2 STAT1 STAT2) ( IFN alpha signaling(JAK1 TYK2 STAT1 STAT2 STAT3) ) INOH 20
STAT1 Hs_Cytokines_and_Inflammatory_Response_WP530_79331 WikiPathways 21
STAT1 Oxidative stress response PANTHER 23
STAT1 Growth hormone receptor signaling Reactome 24
STAT1 IL9 NetPath 24
STAT1 TSLP NetPath 24
STAT1 Regulation of IFNA signaling Reactome 26
STAT1 Hs_IL-6_signaling_pathway_WP364_89832 WikiPathways 26
STAT1 IL27-mediated signaling events PID 26
STAT1 IL-7 NetPath 28
STAT1 Downstream signal transduction Reactome 29
STAT1 Interferon-gamma signaling pathway PANTHER 29
STAT1 Hs_Integrated_Cancer_Pathway_WP1971_82939 WikiPathways 33
STAT1 Hs_IL-2_Signaling_Pathway_WP49_91243 WikiPathways 33
STAT1 EPO signaling pathway PID 33
STAT1 Hs_Interferon_type_I_signaling_pathways_WP585_85198 WikiPathways 35
STAT1 Hs_IL-5_Signaling_Pathway_WP127_78498 WikiPathways 35
STAT1 Signaling by SCF-KIT Reactome 37
STAT1 Hs_Leptin_signaling_pathway_WP2034_89856 WikiPathways 37
STAT1 IL23-mediated signaling events PID 37
STAT1 GMCSF-mediated signaling events PID 38
STAT1 Signaling events mediated by TCPTP PID 40
STAT1 Hs_IL-4_Signaling_Pathway_WP395_89828 WikiPathways 41
STAT1 Hs_Endochondral_Ossification_WP474_87977 WikiPathways 43
STAT1 IFN-gamma pathway PID 43
STAT1 Hs_Oncostatin_M_Signaling_Pathway_WP2374_73668 WikiPathways 44
STAT1 Hs_Kit_receptor_signaling_pathway_WP304_78799 WikiPathways 46
STAT1 TNF receptor signaling pathway PID 46
STAT1 IL6-mediated signaling events PID 48
STAT1 Hs_Prolactin_Signaling_Pathway_WP2037_90015 WikiPathways 52
STAT1 Signaling events mediated by Stem cell factor receptor (c-Kit) PID 53
STAT1 IL2-mediated signaling events PID 54
STAT1 FGF signaling pathway PID 55
STAT1 IL5 NetPath 59
STAT1 SHP2 signaling PID 60
STAT1 Hs_Endoderm_Differentiation_WP2853_88152 WikiPathways 62
STAT1 IL12-mediated signaling events PID 62
STAT1 Interferon alpha/beta signaling Reactome 67
STAT1 Ras Pathway PANTHER 69
STAT1 Pancreatic cancer KEGG 70
STAT1 Leishmaniasis KEGG 71
STAT1 ISG15 antiviral mechanism Reactome 73
STAT1 IL4 NetPath 75
STAT1 Hs_Brain-Derived_Neurotrophic_Factor_(BDNF)_signaling_pathway_WP2380_89803 WikiPathways 80
STAT1 IL2 NetPath 81
STAT1 TSH NetPath 82
STAT1 RANKL NetPath 84
STAT1 IL6 NetPath 85
STAT1 Glucocorticoid receptor regulatory network PID 85
STAT1 Interleukin signaling pathway PANTHER 86
STAT1 CXCR4-mediated signaling events PID 87
STAT1 Interferon gamma signaling Reactome 88
STAT1 JAK-STAT pathway and regulation pathway ( JAK-STAT pathway and regulation pathway Diagram ) INOH 97
STAT1 Leptin NetPath 98
STAT1 Toll-like receptor signaling pathway KEGG 100
STAT1 KitReceptor NetPath 104
STAT1 Prolactin NetPath 105
STAT1 ErbB1 downstream signaling PID 105
STAT1 Hs_EGF-EGFR_Signaling_Pathway_WP437_79266 WikiPathways 107
STAT1 EGF receptor signaling pathway PANTHER 109
STAT1 PDGF signaling pathway PANTHER 113
STAT1 Hs_Integrated_Breast_Cancer_Pathway_WP1984_82941 WikiPathways 122
STAT1 PDGFR-beta signaling pathway PID 125
STAT1 Toxoplasmosis KEGG 131
STAT1 Hepatitis C KEGG 134
STAT1 Angiogenesis PANTHER 141
STAT1 Jak-STAT signaling pathway KEGG 149
STAT1 Hs_VEGFA-VEGFR2_Signaling_Pathway_WP3888_90000 WikiPathways 153
STAT1 BCR NetPath 161
STAT1 Positive regulation of (Transcription of SOCS by STAT dimer) in JAK STAT pathway ( JAK-STAT pathway and regulation pathway Diagram ) INOH 178
STAT1 Chemokine signaling pathway KEGG 187
STAT1 TCR NetPath 261
STAT1 TNFalpha NetPath 274
STAT1 Pathways in cancer KEGG 321
STAT1 EGFR1 NetPath 475
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of STAT1
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines