T(co)F Overview
T(co)F: HOXA1
Species: Homo sapiens
Knock-Method: siRNA
T(co)F Class: Homeo domain factors
T(co)F Superclass: Helix-turn-helix domains
Biosample Name: IMR-90
Tissue Type: Lung_fibroblast
Biosample Type: Cell line
# of Control: 3
# of Treat: 3
Data Source: GEO
Profile ID: GSE37690
Platform: GPL13607
Pubmed ID: 23222703

HOXA1- Target Gene Network

T(co)F   
up-regulated gene   
down-regulated gene   

#T(co)F-target relationships supported by the ChIP-seq data are represented by the thick lines

Gene Type: # of Top Genes:
Target Gene Information of HOXA1
Target Gene T(co)F Mean
Expr. of
Control 		Mean
Expr. of
Treat
Fold Change Log2FC Rank P-value Corrected
_P 		Promoter
_T(co)F 		SE_T(co)F TE_T(co)F
#When clicking the '' button in the last three column of the table, the users can view T(co)Fs supported by the ChIP-seq/motif data in red.
Function Analysis of Downstream Target Genes of HOXA1
Upstream Pathway Annotation of HOXA1
T(co)F Pathway Name Source Gene Number
HOXA1 Hs_Neural_Crest_Differentiation_WP2064_79263 WikiPathways 40
HOXA1 Hs_Endoderm_Differentiation_WP2853_88152 WikiPathways 62
HOXA1 Activation of anterior HOX genes in hindbrain development during early embryogenesis Reactome 120
Target Gene Expression Analysis
Heatmap of Unsupervised Hierarchical Clustering Scatter Diagram of Differential Expression
Expression Atlas of HOXA1
T(co)F Expression in Human Normal Tissues (GTEx) T(co)F Expression in Cancer Cell Lines (CCLE)
T(co)F Expression in Human Cancers (TCGA) T(co)F Expression in Encode Cell Lines