| siRNA |
Smad4 |
Mus musculus |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
bEnd3 |
Brain |
Cell line |
GEO |
GSE15736 |
GPL1261 |
21397841 |
txt
|
| siRNA |
Sox10 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
B16F10 |
Melanoma |
Cell line |
GEO |
GSE25501 |
GPL6238 |
22363655 |
txt
|
| siRNA |
Sox17 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
NG4 |
Embryo |
Stem cell |
GEO |
GSE39770 |
GPL1261 |
23103054 |
txt
|
| siRNA |
Sox2 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
NG4 |
Embryo |
Stem cell |
GEO |
GSE39771 |
GPL1261 |
23103054 |
txt
|
| siRNA |
Stat3 |
Mus musculus |
STAT domain factors |
Immunoglobulin fold |
RAW264.7 |
Macrophage_cells |
Cell line |
GEO |
GSE152986 |
GPL17791 |
32730332 |
txt
|
| siRNA |
Twist1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MC3T3-E1 |
Heart |
Cell line |
GEO |
GSE30953 |
GPL1261 |
22242143 |
txt
|
| siRNA |
Wt1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
LB-22 |
Embryo_kidney |
Cell line |
GEO |
GSE66356 |
GPL1261 |
25804736 |
txt
|
| siRNA |
Xbp1 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Liver |
Liver |
Tissue |
GEO |
GSE40515 |
GPL11180 |
23040070 |
txt
|
| siRNA |
Zbed6 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
C2C12 |
Muscle |
Cell line |
GEO |
GSE33430 |
GPL6885 |
24714595 |
txt
|
| siRNA |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
AtT-20 |
Pituitary_gland |
Cell line |
GEO |
GSE10552 |
GPL1261 |
18922972 |
txt
|
| siRNA |
Cpeb1 |
Mus musculus |
Others |
Unclassified Structure |
Neuro-2a |
Neuron |
Primary cell |
GEO |
GSE147604 |
GPL1261 |
35496917 |
txt
|
| siRNA |
Bcl3 |
Mus musculus |
Rel homology region (RHR) factors |
Immunoglobulin fold |
bone marrow derived macrophage (BMDM) |
Bone_marrow |
Primary cell |
GEO |
GSE39922 |
GPL6885 |
23063365 |
txt
|
| siRNA |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
peritoneal macrophages |
Peritoneum |
Primary cell |
GEO |
GSE70631 |
GPL7202 |
27240213 |
txt
|
| siRNA |
Stat5b |
Mus musculus |
STAT domain factors |
Immunoglobulin fold |
MIN6 |
Pancreas |
Cell line |
GEO |
GSE85496 |
GPL6887 |
- |
txt
|
| siRNA |
Dux |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE100938 |
GPL21103 |
29937225 |
txt
|
| siRNA |
Ncl |
Mus musculus |
Others |
TcoF-DB_TcoF |
ES cells |
Embryo |
Cell line |
GEO |
GSE100938 |
GPL21103 |
29937225 |
txt
|
| siRNA |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
iPSC |
Embryo |
Cell line |
GEO |
GSE104250 |
GPL17021 |
32614092 |
txt
|
| siRNA |
Dnmt3b |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
iPSC |
Embryo |
Cell line |
GEO |
GSE104250 |
GPL17021 |
32614092 |
txt
|
| siRNA |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryo |
Embryo |
Tissue |
GEO |
GSE111265 |
GPL21626 |
- |
txt
|
| siRNA |
Zbp1 |
Mus musculus |
Others |
TcoF-DB_TF |
bone marrow-derived mesenchymal stem_progenitor cells |
Bone_marrow |
Stem cell |
GEO |
GSE117334 |
GPL21493 |
32195010 |
txt
|
| siRNA |
Brca1 |
Mus musculus |
Others |
TcoF-DB_TF |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE118677 |
GPL19057 |
32351783 |
txt
|
| siRNA |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
Mesenchymal stem cells |
Bone_marrow |
In vitro differentiated cell |
GEO |
GSE138980 |
GPL13112 |
32022326 |
txt
|
| siRNA |
Usp7 |
Mus musculus |
Others |
TcoF-DB_TcoF |
ES cells |
Embryo |
Cell line |
GEO |
GSE149341 |
GPL17021 |
- |
txt
|
| siRNA |
Ets2 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Trophoblast stem (TS) cells |
Embryo |
Stem cell |
GEO |
GSE62168 |
GPL1261 |
25446535 |
txt
|
| siRNA |
Hmg20a |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Primary hypothalamic astrocytes |
Hypothalamus |
Cell line |
GEO |
GSE161334 |
GPL19057 |
34093866 |
txt
|
| siRNA |
Hoxa5 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Adult mouse cardiomyocytes |
Heart |
Primary cell |
GEO |
GSE165497 |
GPL24247 |
- |
txt
|
| siRNA |
Foxq1 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
NM18 |
Mammary_gland |
Cell line |
GEO |
GSE23833 |
GPL8321 |
20717954 |
txt
|
| siRNA |
Gata1 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Bone marrow-derived mast cells |
Bone_marrow |
Primary cell |
GEO |
GSE52254 |
GPL13912 |
24615013 |
txt
|
| siRNA |
Gata3 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
CD4+ T helper (Th) cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46185 |
GPL1261 |
23824597 |
txt
|
| siRNA |
Gata4 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
TM4 |
Testis |
Cell line |
GEO |
GSE74471 |
GPL6887 |
26974005 |
txt
|
| siRNA |
Prmt1 |
Mus musculus |
Arginine methyltransferase |
Histone-modifying Enzymes |
3T3-L1 cells |
Adipose_tissue |
Cell line |
GEO |
GSE197065 |
GPL13112 |
35921899 |
txt
|
| siRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE48206 |
GPL16417 |
24162740 |
txt
|
| siRNA |
Kdm5b |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE63285 |
GPL17021 |
- |
txt
|
| siRNA |
Mbd1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
3T3-L1 cells |
Adipose_tissue |
Cell line |
GEO |
GSE73231 |
GPL1261 |
26590716 |
txt
|
| siRNA |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
embryonic cardiomyocytes |
Heart |
Primary cell |
GEO |
GSE77514 |
GPL19057 |
27306334 |
txt
|
| siRNA |
Dnmt3b |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
embryonic cardiomyocytes |
Heart |
Primary cell |
GEO |
GSE77514 |
GPL19057 |
27306334 |
txt
|
| siRNA |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
embryonic cardiomyocytes |
Heart |
Primary cell |
GEO |
GSE81446 |
GPL19057 |
34235895 |
txt
|
| siRNA |
Hnrnpk |
Mus musculus |
HNRNP |
TcoF-DB_TF |
ES cells |
Embryo |
Cell line |
GEO |
GSE84386 |
GPL13112 |
27741228 |
txt
|
| siRNA |
p63 |
Mus musculus |
p53 domain factors |
Immunoglobulin fold |
Primary keratinocytes |
Skin |
Primary cell |
GEO |
GSE10564 |
GPL8321 |
18441228 |
txt
|
| siRNA |
Pparg |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Preadipocytes |
Adipose_tissue |
Tissue |
GEO |
GSE103474 |
GPL10333 |
- |
txt
|
| shRNA |
Sox2 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE34170 |
GPL6885 |
23169531 |
txt
|
| shRNA |
Tcf7 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
EML |
Hematopoietic |
Cell line |
GEO |
GSE30068 |
GPL6887 |
22412390 |
txt
|
| shRNA |
Tet2 |
Mus musculus |
Others |
TcoF-DB_TF |
HAFTL |
Macrophage_cells |
Cell line |
GEO |
GSE39666 |
GPL10333 |
22981865 |
txt
|
| shRNA |
Tet2 |
Mus musculus |
Others |
TcoF-DB_TF |
ES cells |
Embryo |
Cell line |
GEO |
GSE41721 |
GPL11180 |
23222540 |
txt
|
| shRNA |
Tsc22d4 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Liver |
Liver |
Tissue |
GEO |
GSE33324 |
GPL9746 |
23307490 |
txt
|
| shRNA |
Tsc22d4 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Abdominal fat |
Adipose_tissue |
Tissue |
GEO |
GSE53753 |
GPL17791 |
- |
txt
|
| shRNA |
Tsc22d4 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Abdominal fat |
Adipose_tissue |
Tissue |
GEO |
GSE53754 |
GPL17791 |
- |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE26900 |
GPL6887 |
21295276 |
txt
|
| shRNA |
Ncoa3 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE40192 |
GPL6887 |
23019124 |
txt
|
| shRNA |
Ncoa3 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE40193 |
GPL6887 |
23019124 |
txt
|
| shRNA |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE47501 |
GPL10333 |
23754744 |
txt
|
| shRNA |
Cebpa |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
lineage-negative marrow progenitors |
Bone_marrow |
Cell line |
GEO |
GSE55760 |
GPL6887 |
24752325 |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE24842 |
GPL11078 |
21490601 |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE24843 |
GPL11078 |
21490601 |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE26830 |
GPL1261 |
21451524 |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE26833 |
GPL1261 |
21451524 |
txt
|
| shRNA |
Bptf |
Mus musculus |
Bromodomain |
Chromatin Remodeling Factors |
4T1 cells |
Mammary_gland |
Cell line |
GEO |
GSE71864 |
GPL8321 |
27651309 |
txt
|
| shRNA |
Smarca4 |
Mus musculus |
Others |
TcoF-DB_TF |
ES cells |
Embryo |
Cell line |
GEO |
GSE79652 |
GPL10787 |
27154007 |
txt
|
| shRNA |
Smarca4 |
Mus musculus |
Others |
TcoF-DB_TF |
ES cells |
Embryo |
Cell line |
GEO |
GSE79655 |
GPL10787 |
27154007 |
txt
|
| shRNA |
Dnmt3l |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE44643 |
GPL6887 |
24074865 |
txt
|
| shRNA |
Fubp1 |
Mus musculus |
Others |
TcoF-DB_TF |
brain neural progenitors |
Brain |
Tissue |
GEO |
GSE108537 |
GPL19057 |
29606613 |
txt
|
| shRNA |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
MLL-ENL-ERtm |
Muscle |
Cell line |
GEO |
GSE116548 |
GPL15103 |
- |
txt
|
| shRNA |
Crebbp |
Mus musculus |
Others |
Co-activator/repressors |
preSC |
Lung |
Cell line |
GEO |
GSE117550 |
GPL17021 |
30181244 |
txt
|
| shRNA |
Nsd2 |
Mus musculus |
HMG |
Other Alpha-Helix Group |
NPK |
Prostate |
Cell line |
GEO |
GSE118784 |
GPL17021 |
- |
txt
|
| shRNA |
Fubp1 |
Mus musculus |
Others |
TcoF-DB_TF |
BM cells |
Bone_marrow |
Primary cell |
GEO |
GSE124304 |
GPL13112 |
30635626 |
txt
|
| shRNA |
Atoh8 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
mPAC L20 |
Pancreas |
Cell line |
GEO |
GSE43537 |
GPL1261 |
- |
txt
|
| shRNA |
Kat6b |
Mus musculus |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
LT-HSCs |
Bone_marrow |
Cell line |
GEO |
GSE133304 |
GPL19057 |
- |
txt
|
| shRNA |
Cebpa |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Marrow progenitors |
Bone_marrow |
Primary cell |
GEO |
GSE55760 |
GPL6887 |
24752325 |
txt
|
| shRNA |
Cebpb |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
4T1 mammary tumor cells |
Mammary_gland |
Primary cell |
GEO |
GSE40825 |
GPL15887 |
- |
txt
|
| shRNA |
Setd1a |
Mus musculus |
SET |
TcoF-DB_TcoF |
Retina |
Eye |
Tissue |
GEO |
GSE154498 |
GPL21493 |
33938913 |
txt
|
| shRNA |
Esrrb |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE34170 |
GPL6885 |
23169531 |
txt
|
| shRNA |
Brpf1 |
Mus musculus |
Others |
Other Cofactors |
Neural progenitor cells |
Nerve |
Primary cell |
GEO |
GSE157903 |
GPL17021 |
33744924 |
txt
|
| shRNA |
Foxk1 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
MEFs |
Embryo |
Primary cell |
GEO |
GSE112701 |
GPL1261 |
- |
txt
|
| shRNA |
Junb |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Tibialis anterior muscle |
Tibialis_anterior_muscle |
Tissue |
GEO |
GSE18664 |
GPL4134 |
20921137 |
txt
|
| shRNA |
Setdb1 |
Mus musculus |
Others |
ENCODE_TF |
NE-4C |
Neuron |
Cell line |
GEO |
GSE192373 |
GPL24247 |
35671824 |
txt
|
| shRNA |
Klf17 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
168FARN |
Mammary_gland |
Cell line |
GEO |
GSE17081 |
GPL6238 |
19801974 |
txt
|
| shRNA |
Klf6 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCC |
Liver |
Cell line |
GEO |
GSE54762 |
GPL1261 |
26876204 |
txt
|
| shRNA |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
SVZ derived neural stem cells |
Brain |
Stem cell |
GEO |
GSE63853 |
GPL13112 |
25600873 |
txt
|
| shRNA |
Mef2a |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
C2C12 |
Muscle |
Cell line |
GEO |
GSE63798 |
GPL19485 |
25416778 |
txt
|
| shRNA |
Mef2b |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
C2C12 |
Muscle |
Cell line |
GEO |
GSE63798 |
GPL19485 |
25416778 |
txt
|
| shRNA |
Mef2c |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
C2C12 |
Muscle |
Cell line |
GEO |
GSE63798 |
GPL19485 |
25416778 |
txt
|
| shRNA |
Mef2d |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
C2C12 |
Muscle |
Cell line |
GEO |
GSE63798 |
GPL19485 |
25416778 |
txt
|
| shRNA |
Myb |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
AML cells |
Hematopoietic |
Cell line |
GEO |
GSE30745 |
GPL1261 |
21828272 |
txt
|
| shRNA |
Myb |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Tracheal epithelial cell |
Lung |
Primary cell |
GEO |
GSE60365 |
GPL17543 |
25103188 |
txt
|
| shRNA |
Pcbp1 |
Mus musculus |
Others |
TcoF-DB_TF |
Th1 |
Thymus |
Primary cell |
GEO |
GSE84699 |
GPL13112 |
29958803 |
txt
|
| shRNA |
Dux |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE94324 |
GPL17021 |
28459456 |
txt
|
| shRNA |
Setdb1 |
Mus musculus |
Others |
ENCODE_TF |
ES cells |
Embryo |
Cell line |
GEO |
GSE94444 |
GPL19057 |
29351814 |
txt
|
| shRNA |
Nfix |
Mus musculus |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
LSK |
Muscle |
Cell line |
GEO |
GSE45492 |
GPL11180 |
24041575 |
txt
|
| shRNA |
Prdm2 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
C2C12 |
Muscle |
Cell line |
GEO |
GSE58676 |
GPL1261 |
26040698 26697392 |
txt
|
| shRNA |
Rest |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE28141 |
GPL6885 |
21632747 |
txt
|
| shRNA |
Rest |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
NSP |
Brain |
Cell line |
GEO |
GSE38538 |
GPL1261 |
22791895 |
txt
|
| shRNA |
Sall4 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE14219 |
GPL1261 |
19350679 |
txt
|
| RNAi |
Npas4 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Hippocampal Neurons |
Brain |
Primary cell |
GEO |
GSE11258 |
GPL1261 |
18815592 |
txt
|
| knockout |
Smad4 |
Mus musculus |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
Aortic arteries |
Aorta |
Tissue |
GEO |
GSE67182 |
GPL1261 |
- |
txt
|
| knockout |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryoid body |
Embryo |
Tissue |
GEO |
GSE53106 |
GPL1261 |
24401905 |
txt
|
| knockout |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Teratoma |
Embryo |
Tissue |
GEO |
GSE53106 |
GPL1261 |
24401905 |
txt
|
| knockout |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic stem cells (ESCs) |
Embryo |
Stem cell |
GEO |
GSE53107 |
GPL1261 |
24401905 |
txt
|
| knockout |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic stem cells (ESCs) |
Embryo |
Stem cell |
GEO |
GSE53108 |
GPL11180 |
24401905 |
txt
|
| knockout |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Small intestinal organoid |
Intestine |
Tissue |
GEO |
GSE65005 |
GPL6887 |
27054090 |
txt
|
| knockout |
Sohlh1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE24816 |
GPL6887 |
- |
txt
|
| knockout |
Sohlh2 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE24816 |
GPL6887 |
- |
txt
|
| knockout |
Sox11 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Retina |
Eye |
Tissue |
GEO |
GSE43089 |
GPL1261 |
- |
txt
|
| knockout |
Sox11 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Cortex |
Brain |
Tissue |
GEO |
GSE44308 |
GPL1261 |
23483698 |
txt
|
| knockout |
Sox21 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Incisor |
Tooth |
Tissue |
GEO |
GSE99359 |
GPL13912 |
32674056 |
txt
|
| knockout |
Sox6 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Cardiac ventricle |
Heart |
Tissue |
GEO |
GSE60958 |
GPL6887 |
27832192 |
txt
|
| knockout |
Sox9 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Trachea |
Lung |
Tissue |
GEO |
GSE97788 |
GPL6885 |
27941074 |
txt
|
| knockout |
Sp3 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Heart |
Heart |
Tissue |
GEO |
GSE9124 |
GPL1261 |
17923686 |
txt
|
| knockout |
Spdef |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Colon |
Colon |
Tissue |
GEO |
GSE20299 |
GPL8759 |
20801882 |
txt
|
| knockout |
Spdef |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Stomach |
Stomach |
Tissue |
GEO |
GSE20299 |
GPL8759 |
20801882 |
txt
|
| knockout |
Srf |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
Aorta |
Aorta |
Tissue |
GEO |
GSE34545 |
GPL1261 |
- |
txt
|
| knockout |
Srf |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
Denate gyrus of hippocampus |
Brain |
Tissue |
GEO |
GSE60772 |
GPL17543 |
25636686 |
txt
|
| knockout |
Stat3 |
Mus musculus |
STAT domain factors |
Immunoglobulin fold |
Lung typeII cells |
Lung |
Cell line |
GEO |
GSE6846 |
GPL1261 |
18070348 |
txt
|
| knockout |
Stat4 |
Mus musculus |
STAT domain factors |
Immunoglobulin fold |
Lamina propria lymphocytes |
Lymph |
Primary cell |
GEO |
GSE124078 |
GPL11202 |
30770344 |
txt
|
| knockout |
Stat6 |
Mus musculus |
STAT domain factors |
Immunoglobulin fold |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE25088 |
GPL1261 |
21093321 24314139 |
txt
|
| knockout |
Tbx1 |
Mus musculus |
T-Box factors |
Immunoglobulin fold |
Otic vesicles |
Ear |
Tissue |
GEO |
GSE34064 |
GPL1261 |
- |
txt
|
| knockout |
Tbx1 |
Mus musculus |
T-Box factors |
Immunoglobulin fold |
Otic vesicles |
Ear |
Tissue |
GEO |
GSE34065 |
GPL1261 |
- |
txt
|
| knockout |
Tet2 |
Mus musculus |
Others |
TcoF-DB_TF |
Kidney |
Kidney |
Tissue |
GEO |
GSE116911 |
GPL1261 |
- |
txt
|
| knockout |
Thap1 |
Mus musculus |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
Cerebellum |
Brain |
Tissue |
GEO |
GSE97372 |
GPL6885 |
28697333 |
txt
|
| knockout |
Thap1 |
Mus musculus |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
Cortex |
Brain |
Tissue |
GEO |
GSE97372 |
GPL6885 |
28697333 |
txt
|
| knockout |
Thap1 |
Mus musculus |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
Striatum |
Brain |
Tissue |
GEO |
GSE97372 |
GPL6885 |
28697333 |
txt
|
| knockout |
Thap11 |
Mus musculus |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
Heart |
Heart |
Tissue |
GEO |
GSE103959 |
GPL6887 |
29117561 |
txt
|
| knockout |
Thap11 |
Mus musculus |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE120008 |
GPL1261 |
- |
txt
|
| knockout |
Vax2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Whole eye |
Eye |
Tissue |
GEO |
GSE19626 |
GPL8321 |
21148184 |
txt
|
| knockout |
Vdr |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE2421 |
GPL339 |
16118315 |
txt
|
| knockout |
Vdr |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Skin |
Skin |
Tissue |
GEO |
GSE68723 |
GPL6885 |
- |
txt
|
| knockout |
Vdr |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Skin |
Skin |
Tissue |
GEO |
GSE68727 |
GPL6885 |
- |
txt
|
| knockout |
Vdr |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Skin |
Skin |
Tissue |
GEO |
GSE68729 |
GPL6885 |
- |
txt
|
| knockout |
Wt1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Kidney |
Kidney |
Tissue |
GEO |
GSE58073 |
GPL2995 |
25031030 |
txt
|
| knockout |
Wt1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Oviduct |
Oviduct |
Tissue |
GEO |
GSE75924 |
GPL1261 |
28334862 |
txt
|
| knockout |
Yy1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Skeletal muscle |
Muscle |
Tissue |
GEO |
GSE39009 |
GPL8321 |
22711985 |
txt
|
| knockout |
Yy1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Jejunum crypt epithelium |
Intestine |
Tissue |
GEO |
GSE53496 |
GPL1261 |
24821761 |
txt
|
| knockout |
Yy1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Subcutaneous white adipose tissue |
White_adipose_tissue |
Tissue |
GEO |
GSE68382 |
GPL8321 |
26503783 |
txt
|
| knockout |
Yy1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Visceral white adipose tissue |
White_adipose_tissue |
Tissue |
GEO |
GSE70562 |
GPL8321 |
26503783 |
txt
|
| knockout |
Rag1 |
Mus musculus |
Others |
Unclassified Structure |
Liver |
Liver |
Tissue |
GEO |
GSE205510 |
GPL32323 |
35833123 |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE3534 |
GPL339 |
17311920 |
txt
|
| knockout |
Bptf |
Mus musculus |
Bromodomain |
Chromatin Remodeling Factors |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE48123 |
GPL6887 |
25348714 |
txt
|
| knockout |
Prdm11 |
Mus musculus |
Others |
Unclassified Structure |
Lung |
Lung |
Tissue |
GEO |
GSE49705 |
GPL6885 |
- |
txt
|
| knockout |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Bone marrow-derived osteoclasts |
Bone_marrow |
In vitro differentiated cell |
GEO |
GSE59387 |
GPL13912 |
- |
txt
|
| knockout |
Brca1 |
Mus musculus |
Others |
TcoF-DB_TF |
mouse P7 brain |
Brain |
Tissue |
GEO |
GSE6310 |
GPL1261 |
21901007 |
txt
|
| knockout |
Brca1 |
Mus musculus |
Others |
TcoF-DB_TF |
mouse P7 cortex |
Brain |
Tissue |
GEO |
GSE6310 |
GPL340 |
21901007 |
txt
|
| knockout |
Brca1 |
Mus musculus |
Others |
TcoF-DB_TF |
mouse P7 cortex |
Brain |
Tissue |
GEO |
GSE6310 |
GPL8321 |
21901007 |
txt
|
| knockout |
Brca1 |
Mus musculus |
Others |
TcoF-DB_TF |
CD24+ primary mammary epithelial cells |
Mammary_gland |
Cell line |
GEO |
GSE67440 |
GPL6885 |
26941120 |
txt
|
| knockout |
Dnmt3b |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Cardiac ventricle |
Heart |
Tissue |
GEO |
GSE68518 |
GPL6887 |
26098432 |
txt
|
| knockout |
Bcl11b |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
main olfactory epithelium (MOE) |
Main_olfactory_epithelium |
Tissue |
GEO |
GSE90798 |
GPL1261 |
31531404 |
txt
|
| knockout |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Satellite cells |
Skeletal_muscle |
Stem cell |
GEO |
GSE97340 |
GPL10333 |
29146735 |
txt
|
| knockout |
Gata4 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Primary liver sinusoidal endothelial cells |
Liver |
Primary cell |
GEO |
GSE141001 |
GPL24557 |
32916216 |
txt
|
| knockout |
Kdm5b |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
left ventricles |
Heart |
Tissue |
GEO |
GSE197223 |
GPL7202 |
36481938 |
txt
|
| knockout |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Hematopoietic stem cell (HSC) |
Haematopoietic_and_lymphoid_tissue |
Stem cell |
GEO |
GSE27322 |
GPL1261 |
22138693 |
txt
|
| knockout |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE30748 |
GPL4134 |
21816367 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
CD8+ T cells |
Lymph |
Primary cell |
GEO |
GSE40741 |
GPL11180 |
- |
txt
|
| knockout |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
brain cortex |
Cortex |
Tissue |
GEO |
GSE48789 |
GPL10333 |
24050401 |
txt
|
| knockout |
Tet1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Hippocampus |
Hippocampus |
Tissue |
GEO |
GSE48789 |
GPL10333 |
24050401 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
CD45.2+LSK cells |
Bone_marrow |
Primary cell |
GEO |
GSE50537 |
GPL10787 |
24953053 |
txt
|
| knockout |
Crebbp |
Mus musculus |
Others |
Co-activator/repressors |
Germinal center B cells |
Spleen |
Primary cell |
GEO |
GSE88799 |
GPL1261 |
28069569 |
txt
|
| knockout |
Rag1 |
Mus musculus |
Others |
Unclassified Structure |
Mice fractured callus |
Bone |
Tissue |
GEO |
GSE99128 |
GPL6885 |
28596766 |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Liver |
Liver |
Tissue |
GEO |
GSE67734 |
GPL6885 |
- |
txt
|
| knockout |
Ezh1 |
Mus musculus |
Others |
Other Cofactors |
LSK |
Muscle |
Cell line |
GEO |
GSE36288 |
GPL10787 |
23122289 |
txt
|
| knockout |
Siah2 |
Mus musculus |
Others |
Other Cofactors |
Primary isolated cells |
Heart |
Primary cell |
GEO |
GSE154667 |
GPL21810 |
- |
txt
|
| knockout |
Mapk9 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Mouse Hip Cartilage |
Hip |
Tissue |
GEO |
GSE155892 |
GPL6887 |
33392255;36182100 |
txt
|
| knockout |
Mapk9 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Mouse total knee |
Knee |
Tissue |
GEO |
GSE155896 |
GPL6887 |
- |
txt
|
| knockout |
Hipk2 |
Mus musculus |
HIPK |
Other Cofactors |
cardiac tissue |
Heart |
Tissue |
GEO |
GSE169429 |
GPL21163 |
36182775 |
txt
|
| knockout |
Lin28a |
Mus musculus |
Others |
Beta-Scaffold Factors |
Heart |
Heart |
Tissue |
GEO |
GSE106897 |
GPL17021 |
30636447 |
txt
|
| knockout |
Twist1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
stromal cells |
Bone_marrow |
Cell line |
GEO |
GSE107814 |
GPL21103 |
30026340 |
txt
|
| knockout |
Kat6a |
Mus musculus |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE108242 |
GPL19057 |
30069049 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
calvaria |
Calvaria |
Tissue |
GEO |
GSE111245 |
GPL13112 |
- |
txt
|
| knockout |
Kmt2d |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
iBiP melanoma mouse model tumor cell |
Skin |
Cell line |
GEO |
GSE116852 |
GPL13112 |
33086062 |
txt
|
| knockout |
Mecp2 |
Mus musculus |
Others |
TcoF-DB_TF |
brown adipose tissue |
Adipose_tissue |
Tissue |
GEO |
GSE117517 |
GPL21273 |
- |
txt
|
| knockout |
Mecp2 |
Mus musculus |
Others |
TcoF-DB_TF |
inguinal adipose tissue |
Adipose_tissue |
Tissue |
GEO |
GSE117517 |
GPL21273 |
- |
txt
|
| knockout |
Eed |
Mus musculus |
Others |
TcoF-DB_TcoF |
Forebrain |
Brain |
Tissue |
GEO |
GSE123331 |
GPL13112 |
35048973 |
txt
|
| knockout |
Eed |
Mus musculus |
Others |
TcoF-DB_TcoF |
hindbrain |
Brain |
Tissue |
GEO |
GSE123331 |
GPL13112 |
35048973 |
txt
|
| knockout |
Eed |
Mus musculus |
Others |
TcoF-DB_TcoF |
midbrain |
Brain |
Tissue |
GEO |
GSE123331 |
GPL13112 |
35048973 |
txt
|
| knockout |
Adnp |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Whole embryonic body |
Embryo |
Tissue |
GEO |
GSE4068 |
GPL339 |
30106381 |
txt
|
| knockout |
Eed |
Mus musculus |
Others |
TcoF-DB_TcoF |
spinal cord |
Spinal_cord |
Tissue |
GEO |
GSE123331 |
GPL13112 |
35048973 |
txt
|
| knockout |
Ahr |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Liver |
Liver |
Tissue |
GEO |
GSE10082 |
GPL1261 |
16214954 |
txt
|
| knockout |
Ahr |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Lung |
Lung |
Tissue |
GEO |
GSE48130 |
GPL4134 |
25119038 |
txt
|
| knockout |
Bcl3 |
Mus musculus |
Rel homology region (RHR) factors |
Immunoglobulin fold |
Osteoblast |
Bone |
Primary cell |
GEO |
GSE125153 |
GPL21103 |
- |
txt
|
| knockout |
Arid1a |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
Liver |
Liver |
Tissue |
GEO |
GSE58964 |
GPL7202 |
- |
txt
|
| knockout |
Arhgap35 |
Mus musculus |
Others |
TcoF-DB_TF |
Ventral spinal cord |
Ventral_spinal_cord |
Tissue |
GEO |
GSE126534 |
GPL17021 |
30902550 |
txt
|
| knockout |
Arid1a |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE67695 |
GPL1261 |
26279473 |
txt
|
| knockout |
Sirt6 |
Mus musculus |
Sirtuin |
Chromatin Remodeling Factors |
Liver |
Liver |
Tissue |
GEO |
GSE129370 |
GPL23479 |
- |
txt
|
| knockout |
Atf3 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Breast tumor-associated macrophage |
Mammary_gland |
Primary cell |
GEO |
GSE36904 |
GPL7202 |
23921126 |
txt
|
| knockout |
Ctnnb1 |
Mus musculus |
Casein |
Co-activator/repressors |
MGE cells |
Embryo |
Cell line |
GEO |
GSE130320 |
GPL17021 |
34460072 |
txt
|
| knockout |
Nsd2 |
Mus musculus |
HMG |
Other Alpha-Helix Group |
Bone marrow immature B cells |
Bone_marrow |
Primary cell |
GEO |
GSE130550 |
GPL17021 |
31636135 |
txt
|
| knockout |
Atf4 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Embryonic neurons |
Brain |
Primary cell |
GEO |
GSE10470 |
GPL6100 |
18458112 |
txt
|
| knockout |
Nr4a1 |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
PyVT mouse mammary tumor cells |
Mammary_gland |
Cell line |
GEO |
GSE131895 |
GPL24247 |
33087562 |
txt
|
| knockout |
Atf4 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Quadriceps femoris muscles |
Muscle |
Cell line |
GEO |
GSE72658 |
GPL6885 |
26338703 |
txt
|
| knockout |
Dux |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Embryo |
Embryo |
Tissue |
GEO |
GSE132045 |
GPL24247 |
31591446 |
txt
|
| knockout |
Atoh1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Intestinal epithelial Lgr5(hi) stem cells |
Gastrointestinal_tissue |
Stem cell |
GEO |
GSE41541 |
GPL8321 |
23428873 |
txt
|
| knockout |
Bcl11a |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Bone marrow erythoid progenitors |
Bone_marrow |
Primary cell |
GEO |
GSE28333 |
GPL1261 |
21998251 |
txt
|
| knockout |
Dux |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Embryo |
Embryo |
Tissue |
GEO |
GSE134832 |
GPL24247 |
31591446 |
txt
|
| knockout |
Bcl6 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE16527 |
GPL1261 |
- |
txt
|
| knockout |
Lin28b |
Mus musculus |
CSD |
Beta-Scaffold Factors |
Bone marrow immature B cells |
Bone_marrow |
Primary cell |
GEO |
GSE135603 |
GPL19057 |
31562190 |
txt
|
| knockout |
Bcl6 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Myeloid cells |
Bone_marrow |
Primary cell |
GEO |
GSE24813 |
GPL1261 |
21911423 |
txt
|
| knockout |
Bhlha9 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Whole limb bud |
Limb |
Tissue |
GEO |
GSE81223 |
GPL1261 |
28324176 |
txt
|
| knockout |
Cbx2 |
Mus musculus |
Others |
Chromatin Remodeling Factors |
Embryonic gonads |
Gonads |
Tissue |
GEO |
GSE29485 |
GPL1261 |
22186409 |
txt
|
| knockout |
Usp7 |
Mus musculus |
Others |
TcoF-DB_TcoF |
ES cells |
Embryo |
Cell line |
GEO |
GSE141788 |
GPL21273 |
32894293 |
txt
|
| knockout |
Cebpb |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Mammary epithlial cells (MECs) |
Mammary_gland |
Cell line |
GEO |
GSE16380 |
GPL1261 |
20054865 |
txt
|
| knockout |
Pcgf6 |
Mus musculus |
PCGF |
TcoF-DB_TF |
Brain |
Brain |
Tissue |
GEO |
GSE143206 |
GPL27973 |
32482889 |
txt
|
| knockout |
Cebpb |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE23821 |
GPL1261 |
21072215 |
txt
|
| knockout |
Pcgf6 |
Mus musculus |
PCGF |
TcoF-DB_TF |
Liver |
Liver |
Tissue |
GEO |
GSE143206 |
GPL27973 |
32482889 |
txt
|
| knockout |
Pcgf6 |
Mus musculus |
PCGF |
TcoF-DB_TF |
Testis |
Testis |
Tissue |
GEO |
GSE143206 |
GPL27973 |
32482889 |
txt
|
| knockout |
Cebpe |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE23821 |
GPL1261 |
21072215 |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
mature Pvergic cortical interneurons |
Cortex |
Tissue |
GEO |
GSE145025 |
GPL17021 |
32147726 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Testes |
Testis |
Tissue |
GEO |
GSE18396 |
GPL1261 |
20007774 |
txt
|
| knockout |
Zmat3 |
Mus musculus |
Others |
TcoF-DB_TF |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE145430 |
GPL13112 |
- |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Juvenile testes |
Testis |
Tissue |
GEO |
GSE22500 |
GPL10572 |
20616082 |
txt
|
| knockout |
Setd2 |
Mus musculus |
SET |
TcoF-DB_TcoF |
primary renal tubular epithelial (RTE) cells |
Kidney |
Primary cell |
GEO |
GSE146541 |
GPL17021 |
35115713 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Juvenile testes |
Testis |
Tissue |
GEO |
GSE22507 |
GPL10572 |
20616082 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Juvenile testes |
Testis |
Tissue |
GEO |
GSE22508 |
GPL10572 |
20616082 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Juvenile testes |
Testis |
Tissue |
GEO |
GSE22510 |
GPL10572 |
20616082 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Testes |
Testis |
Tissue |
GEO |
GSE41895 |
GPL1261 |
- |
txt
|
| knockout |
Med19 |
Mus musculus |
Mediator complex |
Co-activator/repressors |
Gonadal white adipose tissue |
White_adipose_tissue |
Tissue |
GEO |
GSE150250 |
GPL13112 |
33027649 |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE41896 |
GPL1261 |
- |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE41897 |
GPL1261 |
- |
txt
|
| knockout |
Dmrt1 |
Mus musculus |
DM-type intertwined zinc finger factors |
Zinc-coordinating DNA-binding domains |
Testes |
Testis |
Tissue |
GEO |
GSE41897 |
GPL1261 |
- |
txt
|
| knockout |
Irf8 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
mice brain |
Brain |
Tissue |
GEO |
GSE154002 |
GPL24247 |
34379515 |
txt
|
| knockout |
E2f4 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
Forebrain |
Brain |
Tissue |
GEO |
GSE10401 |
GPL339 |
- |
txt
|
| knockout |
E2f4 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
Forebrain |
Brain |
Tissue |
GEO |
GSE10401 |
GPL340 |
- |
txt
|
| knockout |
Mkl1 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Bone marrow differentiated macrophages |
Bone_marrow |
Cell line |
GEO |
GSE155298 |
GPL21626 |
- |
txt
|
| knockout |
Elf5 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Mammary gland |
Mammary_gland |
Tissue |
GEO |
GSE32103 |
GPL1261 |
23086238 |
txt
|
| knockout |
Tfap2a |
Mus musculus |
Basic helix-span-helix factors (bHSH) |
Basic domains |
Brain |
Brain |
Tissue |
GEO |
GSE155629 |
GPL21103 |
32769099 |
txt
|
| knockout |
En2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Cerebellum |
Brain |
Tissue |
GEO |
GSE51612 |
GPL7202 |
24355397 |
txt
|
| knockout |
En2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Hippocampus |
Hippocampus |
Tissue |
GEO |
GSE51612 |
GPL7202 |
24355397 |
txt
|
| knockout |
Sirt3 |
Mus musculus |
Sirtuin |
Chromatin Remodeling Factors |
pancreatic beta cell |
Pancreatic_islets |
Primary cell |
GEO |
GSE156345 |
GPL19057 |
- |
txt
|
| knockout |
Phf8 |
Mus musculus |
PHF |
Chromatin Remodeling Factors |
Prostate |
prostate |
Tissue |
GEO |
GSE157621 |
GPL21273 |
33009820 |
txt
|
| knockout |
Foxa2 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
Whole lung |
Lung |
Tissue |
GEO |
GSE19204 |
GPL1261 |
20483781 |
txt
|
| knockout |
Arid2 |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
LSK |
Muscle |
Cell line |
GEO |
GSE164384 |
GPL19057 |
- |
txt
|
| knockout |
Foxo1 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
Ventromedial hypothalamus |
Brain |
Tissue |
GEO |
GSE36948 |
GPL6887 |
- |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Keratinocytes |
Skin |
Primary cell |
GEO |
GSE166356 |
GPL17021 |
34586646 |
txt
|
| knockout |
Foxp1 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
Lens |
Eye |
Tissue |
GEO |
GSE93693 |
GPL10787 |
28384713 |
txt
|
| knockout |
Jmjd6 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Lin-Sca1+Kit+ (LSK) haematopoietic stem and progenitor cells |
Bone_marrow |
Cell line |
GEO |
GSE168283 |
GPL19057 |
- |
txt
|
| knockout |
Gata2 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
renal collecting duct cells |
Kidney |
Tissue |
GEO |
GSE52448 |
GPL4134 |
24636993 |
txt
|
| knockout |
Esr1 |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Liver |
Liver |
Tissue |
GEO |
GSE174535 |
GPL24247 |
34215813 |
txt
|
| knockout |
Cited2 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Hematopoietic stem cell (HSC) |
Haematopoietic_and_lymphoid_tissue |
Stem cell |
GEO |
GSE175372 |
GPL19057 |
34715054 |
txt
|
| knockout |
Gata4 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Jejunum |
Intestine |
Tissue |
GEO |
GSE11194 |
GPL1261 |
18812176 |
txt
|
| knockout |
Gata5 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Left lung |
Lung |
Tissue |
GEO |
GSE47425 |
GPL1261 |
24199649 |
txt
|
| knockout |
Suz12 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Alveolar macrophage |
Lung |
Primary cell |
GEO |
GSE176111 |
GPL19057 |
34533976 |
txt
|
| knockout |
Gfi1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
RAW264.7 |
Macrophage_cells |
Cell line |
GEO |
GSE152868 |
GPL1261 |
- |
txt
|
| knockout |
Suz12 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Alveolar macrophage |
Lung |
Primary cell |
GEO |
GSE176115 |
GPL19057 |
34533976 |
txt
|
| knockout |
Gfi1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
T-cells |
Cord_Blood |
Primary cell |
GEO |
GSE4940 |
GPL339 |
18034420 |
txt
|
| knockout |
Irf7 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
c-kit+ leukemic cells |
Bone_marrow |
Primary cell |
GEO |
GSE178560 |
GPL24247 |
35256780 |
txt
|
| knockout |
Gfi1b |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Ter119 positive erythroid cells |
Bone_marrow |
Primary cell |
GEO |
GSE54205 |
GPL1261 |
24800817 |
txt
|
| knockout |
Actl6a |
Mus musculus |
Actin |
Chromatin Remodeling Factors |
sciatic nerve |
Nerve |
Tissue |
GEO |
GSE179340 |
GPL21103 |
35434551 |
txt
|
| knockout |
Grhl2 |
Mus musculus |
Grainyhead domain factors |
Immunoglobulin fold |
V6.5 |
Embryo |
Cell line |
GEO |
GSE93146 |
GPL6885 |
30017589 |
txt
|
| knockout |
Ahr |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Liver |
Liver |
Tissue |
GEO |
GSE179398 |
GPL24247 |
36241614 |
txt
|
| knockout |
Hnf1a |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Jejunum |
Intestine |
Tissue |
GEO |
GSE23040 |
GPL1261 |
20808783 |
txt
|
| knockout |
Satb2 |
Mus musculus |
CUT |
Helix-turn-helix |
Intestine epithelium |
Colon |
Primary cell |
GEO |
GSE180013 |
GPL24247 |
34582804 |
txt
|
| knockout |
Hoxc13 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Skin |
Skin |
Tissue |
GEO |
GSE23759 |
GPL9746 |
- |
txt
|
| knockout |
Arid1b |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
bone marrow leukemia cells |
Bone_marrow |
Cell line |
GEO |
GSE188291 |
GPL19057 |
35022500 |
txt
|
| knockout |
Hsf4 |
Mus musculus |
Heat shock factors |
Helix-turn-helix domains |
Lens |
Eye |
Tissue |
GEO |
GSE12415 |
GPL1261 |
- |
txt
|
| knockout |
Arid2 |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
bone marrow leukemia cells |
Bone_marrow |
Cell line |
GEO |
GSE188291 |
GPL19057 |
35022500 |
txt
|
| knockout |
Id2 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Distal half of midgut |
Small_intestine |
Tissue |
GEO |
GSE43014 |
GPL2995 |
29463648 |
txt
|
| knockout |
Kat7 |
Mus musculus |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Thymic epithelial cells |
Thymic_lobes |
Cell line |
GEO |
GSE188869 |
GPL19057 |
35061506 |
txt
|
| knockout |
Irf6 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Skin |
Skin |
Tissue |
GEO |
GSE5800 |
GPL1261 |
17041601 |
txt
|
| knockout |
Kat7 |
Mus musculus |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Thymic epithelial cells |
Thymic_lobes |
Cell line |
GEO |
GSE188870 |
GPL19057 |
35061506 |
txt
|
| knockout |
Irf8 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
Splenic CD11b+Gr-1 cells |
Lymph |
Primary cell |
GEO |
GSE39228 |
GPL6887 |
24091328 |
txt
|
| knockout |
Bud31 |
Mus musculus |
Others |
TcoF-DB_TcoF |
Spermatogonial stem cells |
Testis |
Cell line |
GEO |
GSE189714 |
GPL24247 |
36114296 |
txt
|
| knockout |
Jarid2 |
Mus musculus |
ARID domain factors |
Helix-turn-helix domains |
Embryonic pancreas |
Pancreas |
Tissue |
GEO |
GSE77238 |
GPL1261 |
28912479 |
txt
|
| knockout |
Gata2 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Pituitary gland |
Brain |
Tissue |
GEO |
GSE189915 |
GPL24247 |
35643321 |
txt
|
| knockout |
Padi2 |
Mus musculus |
Other_CRF |
Chromatin Remodeling Factors |
Testis |
Testis |
Tissue |
GEO |
GSE194034 |
GPL21273 |
36224627 |
txt
|
| knockout |
Klf6 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Liver |
Liver |
Tissue |
GEO |
GSE85381 |
GPL11180 |
- |
txt
|
| knockout |
Lhx8 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Oocytes |
Gonads |
Primary cell |
GEO |
GSE109473 |
GPL6887 |
29329412 |
txt
|
| knockout |
Lhx8 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Ovary |
Ovary |
Tissue |
GEO |
GSE7774 |
GPL1261 |
18509161 |
txt
|
| knockout |
Dnmt3l |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Spermatogonial progenitor cells |
Testis |
Cell line |
GEO |
GSE54411 |
GPL16173 |
24850856 |
txt
|
| knockout |
Lmx1b |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Proximal limb |
Limb |
Tissue |
GEO |
GSE10516 |
GPL1261 |
18351676 |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Cortex |
Brain |
Tissue |
GEO |
GSE58261 |
GPL17021 |
25080494 |
txt
|
| knockout |
Lmx1b |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Kidney |
Kidney |
Tissue |
GEO |
GSE12008 |
GPL4134 |
18996370 |
txt
|
| knockout |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Cortex |
Brain |
Tissue |
GEO |
GSE58261 |
GPL17021 |
25080494 |
txt
|
| knockout |
Mafg |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Whole embryo |
Embryo |
Tissue |
GEO |
GSE29558 |
GPL4134 |
22158967 |
txt
|
| knockout |
Mbd2 |
Mus musculus |
Others |
TcoF-DB_TF |
CD4+CD8+ thymocytes |
Thymus |
Primary cell |
GEO |
GSE105763 |
GPL1261 |
29330145 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
Retina |
Eye |
Tissue |
GEO |
GSE65082 |
GPL13112 |
25989023 |
txt
|
| knockout |
Mbd2 |
Mus musculus |
Others |
TcoF-DB_TF |
GFP+ BM leukemia cells |
Lymph |
Primary cell |
GEO |
GSE105763 |
GPL1261 |
29330145 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
Retina |
Eye |
Tissue |
GEO |
GSE71463 |
GPL17021 |
27377164 |
txt
|
| knockout |
Atrx |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE73881 |
GPL19057 |
- |
txt
|
| knockout |
Dnmt3a |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
peritoneal macrophages |
Peritoneum |
Primary cell |
GEO |
GSE74750 |
GPL17021 |
27240213 |
txt
|
| knockout |
Meis1 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
KSL hematopoietic cells |
Hematopoietic |
Stem cell |
GEO |
GSE38336 |
GPL4134 |
24498346 |
txt
|
| knockout |
Gtf2ird1 |
Mus musculus |
GTF2I |
Other Alpha-Helix Group |
Lip |
Lip |
Tissue |
GEO |
GSE81082 |
GPL13112 |
- |
txt
|
| knockout |
Meis1 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Immortalized myeloid cell |
Bone_marrow |
Primary cell |
GEO |
GSE50645 |
GPL11180 |
27018596 |
txt
|
| knockout |
Mkx |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
PDL |
Tooth |
Tissue |
GEO |
GSE92331 |
GPL21810 |
27993989 |
txt
|
| knockout |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
small intestinal crypts |
Small_intestinal_crypts |
Tissue |
GEO |
GSE81576 |
GPL17021 |
27342214 |
txt
|
| knockout |
Nelfb |
Mus musculus |
Others |
General Cofactors |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE24114 |
GPL6885 |
21865163 |
txt
|
| knockout |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
kidney Cap Mesenchyme |
Kidney |
Cell line |
GEO |
GSE94089 |
GPL13112 |
34944697 |
txt
|
| knockout |
Neurod1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Pineal gland |
Eye |
Tissue |
GEO |
GSE35396 |
GPL1261 |
22784109 |
txt
|
| knockout |
Neurod1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Retina |
Eye |
Tissue |
GEO |
GSE35396 |
GPL1261 |
22784109 |
txt
|
| knockout |
Neurod1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Pineal gland |
Eye |
Tissue |
GEO |
GSE6030 |
GPL1261 |
17630985 |
txt
|
| knockout |
Nfil3 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Prepro NK cells |
Bone_marrow |
Primary cell |
GEO |
GSE45955 |
GPL11180 |
- |
txt
|
| knockout |
Nhlh2 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Retina |
Eye |
Tissue |
GEO |
GSE16756 |
GPL8321 |
- |
txt
|
| knockout |
Nr2f2 |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
E14.5 Ovary |
Ovary |
Tissue |
GEO |
GSE100015 |
GPL1261 |
28818950 |
txt
|
| knockout |
Nr2f2 |
Mus musculus |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
E16.5 Ovary |
Ovary |
Tissue |
GEO |
GSE100015 |
GPL1261 |
28818950 |
txt
|
| knockout |
Otx2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Retina |
Eye |
Tissue |
GEO |
GSE21900 |
GPL1261 |
21602925 |
txt
|
| knockout |
Otx2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Ganglionic eminences and septum |
Brain |
Tissue |
GEO |
GSE69547 |
GPL7202 |
26166575 |
txt
|
| knockout |
Pax5 |
Mus musculus |
Paired box factors |
Helix-turn-helix domains |
B220+ cells |
Bone_marrow |
Primary cell |
GEO |
GSE39554 |
GPL1261 |
23019372 |
txt
|
| knockout |
Pax6 |
Mus musculus |
Paired box factors |
Helix-turn-helix domains |
Surface ectoderm |
Embryo |
Tissue |
GEO |
GSE49228 |
GPL6887 |
21540023 |
txt
|
| knockout |
Pbx1 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
BM cells |
Bone_marrow |
Primary cell |
GEO |
GSE30028 |
GPL1261 |
23660001 |
txt
|
| knockout |
Pitx2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Cornea |
Eye |
Tissue |
GEO |
GSE76047 |
GPL10787 |
26968737 |
txt
|
| knockout |
Plagl2 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Small intestine |
Intestine |
Tissue |
GEO |
GSE9123 |
GPL1261 |
17983586 |
txt
|
| knockout |
Prdm1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Mid-intestine |
Intestine |
Tissue |
GEO |
GSE30556 |
GPL6885 |
21878906 |
txt
|
| knockout |
Prdm14 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE45507 |
GPL6887 |
23670199 |
txt
|
| knockout |
Prox1 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Liver |
Liver |
Tissue |
GEO |
GSE36583 |
GPL1261 |
24449835 |
txt
|
| knockout |
Rest |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Brain |
Brain |
Tissue |
GEO |
GSE68368 |
GPL6885 |
26745185 |
txt
|
| knockout |
Rest |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Brain |
Brain |
Tissue |
GEO |
GSE68459 |
GPL1261 |
26745185 |
txt
|
| knockout |
Runx1 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
Embryo |
Embryo |
Tissue |
GEO |
GSE2592 |
GPL1261 |
18671852 |
txt
|
| knockout |
Runx1 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
KSL cells |
Bone_marrow |
Primary cell |
GEO |
GSE40155 |
GPL8321 |
22919028 |
txt
|
| knockout |
Runx1 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
ProB cells |
Lymph |
Cell line |
GEO |
GSE45424 |
GPL7202 |
23704093 |
txt
|
| knockout |
Runx1 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
Luminal epithelial cells |
Mammary_gland |
Primary cell |
GEO |
GSE47375 |
GPL1261 |
25415051 |
txt
|
| knockout |
Runx2 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
Embryonic humeri |
Humeri |
Tissue |
GEO |
GSE4911 |
GPL81 |
16829211 |
txt
|
| knockout |
Runx2 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
Embryonic humeri |
Humeri |
Tissue |
GEO |
GSE4911 |
GPL82 |
16829211 |
txt
|
| knockout |
Runx2 |
Mus musculus |
Runt domain factors |
Immunoglobulin fold |
Embryonic humeri |
Humeri |
Tissue |
GEO |
GSE4911 |
GPL83 |
16829211 |
txt
|
| knockout |
Sall1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Kidney |
Kidney |
Tissue |
GEO |
GSE45841 |
GPL10787 |
24744442 |
txt
|
| knockout |
Sall1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Kidney |
Kidney |
Tissue |
GEO |
GSE45844 |
GPL7202 |
24744442 |
txt
|
| knockout |
Shox2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Right atria |
Heart |
Tissue |
GEO |
GSE39924 |
GPL13730 |
23455426 |
txt
|
| knockout |
Shox2 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Embryonic forelimb |
Muscle |
Tissue |
GEO |
GSE51523 |
GPL17791 |
24347445 |
txt
|
| knockout |
Smad1 |
Mus musculus |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
Lung left lobe |
Lung |
Tissue |
GEO |
GSE26502 |
GPL1261 |
21270055 |
txt
|
| knockdown |
Tet2 |
Mus musculus |
Others |
TcoF-DB_TF |
GMPs |
Muscle |
Cell line |
GEO |
GSE42666 |
GPL13912 |
24218139 |
txt
|
| knockdown |
Tet2 |
Mus musculus |
Others |
TcoF-DB_TF |
LSK |
Muscle |
Cell line |
GEO |
GSE42666 |
GPL13912 |
24218139 |
txt
|
| knockdown |
Pogz |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
fetal liver |
Liver |
Tissue |
GEO |
GSE113503 |
GPL1261 |
29898395 |
txt
|
| knockdown |
Dnmt1 |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
intestinal tumor organoid |
Gastrointestinal_tissue |
Tissue |
GEO |
GSE72768 |
GPL5642 |
27143627 |
txt
|
| knockdown |
Ezh2 |
Mus musculus |
Others |
TcoF-DB_TF |
Brain |
Brain |
Tissue |
GEO |
GSE50951 |
GPL6887 |
27538496 |
txt
|
| knockdown |
Bcl11b |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Embryonic fibroblasts |
Embryo |
Primary cell |
GEO |
GSE83980 |
GPL1261 |
27586877 |
txt
|
| knockdown |
Sfpq |
Mus musculus |
NonO domain factors |
Yet undefined DNA-binding domains |
P19 cells |
Embryo |
Cell line |
GEO |
GSE89023 |
GPL13912 |
29084942 |
txt
|
| knockdown |
Sfpq |
Mus musculus |
NonO domain factors |
Yet undefined DNA-binding domains |
P19 cells |
Embryo |
Cell line |
GEO |
GSE89033 |
GPL13912 |
29084942 |
txt
|
| knockdown |
Atf3 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Ly6G+ neutrophils |
Bone_marrow |
Primary cell |
GEO |
GSE53973 |
GPL13912 |
24470589 |
txt
|
| knockdown |
Batf2 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Bone marrow-derived macrophages |
Bone_marrow |
Primary cell |
GEO |
GSE59210 |
GPL6887 |
25957166 |
txt
|
| knockdown |
Cbfb |
Mus musculus |
Others |
beta-Scaffold Factors |
Peripheral CD4+CD25hi cells |
Peripheral_blood |
Primary cell |
GEO |
GSE18148 |
GPL1261 |
19800266 |
txt
|
| knockdown |
Erg |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
HSPCs |
Bone_marrow |
Primary cell |
GEO |
GSE48600 |
GPL1261 |
28436588 |
txt
|
| knockdown |
Tbx20 |
Mus musculus |
T-Box factors |
Immunoglobulin fold |
primary cardiac fibroblasts |
Heart |
Primary cell |
GEO |
GSE175763 |
GPL19057 |
35293863 |
txt
|
| knockdown |
Snai1 |
Mus musculus |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Heart |
Heart |
Tissue |
GEO |
GSE217528 |
GPL21273 |
- |
txt
|
| knockdown |
Nrf1 |
Mus musculus |
Basic leucine zipper factors (bZIP) |
Basic domains |
Liver |
Liver |
Tissue |
GEO |
GSE35124 |
GPL4134 |
22586274 |
txt
|
| CRISPR |
Kdm2a |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE117148 |
GPL23479 |
31172793 |
txt
|
| CRISPR |
Mef2d |
Mus musculus |
MADS box factors |
alpha-Helices exposed by beta-structures |
Cardiac ventricle |
Heart |
Tissue |
GEO |
GSE132992 |
GPL21103 |
- |
txt
|
| CRISPR |
Myc |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
muscle stem cells |
Skeletal_muscle |
Stem cell |
GEO |
GSE133956 |
GPL18480 |
34534448 |
txt
|
| CRISPR |
Myod1 |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
myoblast |
Skeletal_muscle |
Primary cell |
GEO |
GSE137507 |
GPL24247 |
33468253 |
txt
|
| CRISPR |
Gsk3b |
Mus musculus |
Others |
TcoF-DB_TcoF |
mPFC D2 neurons |
Neuron |
Tissue |
GEO |
GSE139564 |
GPL19057 |
32584144 |
txt
|
| CRISPR |
Ssrp1 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE141788 |
GPL21273 |
32894293 |
txt
|
| CRISPR |
Pdx1 |
Mus musculus |
Homeo domain factors |
Helix-turn-helix domains |
Liver |
Liver |
Tissue |
GEO |
GSE146847 |
GPL21103 |
34341582 |
txt
|
| CRISPR |
Fli1 |
Mus musculus |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD8 T cells |
Lymph |
Primary cell |
GEO |
GSE149838 |
GPL21626 |
- |
txt
|
| CRISPR |
Kmt2d |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
MA1L |
Liver |
Cell line |
GEO |
GSE151225 |
GPL17021 |
32887696 |
txt
|
| CRISPR |
Kmt2d |
Mus musculus |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
MA1L |
Liver |
Cell line |
GEO |
GSE151227 |
GPL17021 |
32887696 |
txt
|
| CRISPR |
Ssrp1 |
Mus musculus |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
ES cells |
Embryo |
Cell line |
GEO |
GSE155863 |
GPL21273 |
32894293 |
txt
|
| CRISPR |
Satb2 |
Mus musculus |
CUT |
Helix-turn-helix |
Colon organoid |
Colon |
Organoid |
GEO |
GSE167283 |
GPL24247 |
34582804 |
txt
|
| CRISPR |
Foxp3 |
Mus musculus |
Fork head / winged helix factors |
Helix-turn-helix domains |
CD4+ Th0 cells |
Spleens_and_lymphnodes |
Primary cell |
GEO |
GSE167472 |
GPL19057 |
34341582 |
txt
|
| CRISPR |
Myc |
Mus musculus |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
quiescent muscle stem cell |
Skeletal_muscle |
Stem cell |
GEO |
GSE175899 |
GPL18480 |
34534448 |
txt
|
| CRISPR |
Gata4 |
Mus musculus |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
primary cardiac fibroblasts |
Heart |
Primary cell |
GEO |
GSE175763 |
GPL19057 |
35293863 |
txt
|
| CRISPR |
Tbx20 |
Mus musculus |
T-Box factors |
Immunoglobulin fold |
primary cardiac fibroblasts |
Heart |
Primary cell |
GEO |
GSE175763 |
GPL19057 |
35293863 |
txt
|