| siRNA |
HSF2 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE48672 |
GPL10558 |
26119944 |
txt
|
| siRNA |
LHX9 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
PGR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE48853 |
GPL571 |
25875046 |
txt
|
| siRNA |
LYAR |
Homo sapiens |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
BE(2)C cells |
Brain |
Cell line |
GEO |
GSE90139 |
GPL16686 |
- |
txt
|
| siRNA |
SPDEF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE48928 |
GPL10558 |
24043118 |
txt
|
| siRNA |
MAF |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
Lymphatic endothelial cells |
Lymph |
Primary cell |
GEO |
GSE16356 |
GPL570 |
20080955 |
txt
|
| siRNA |
MAFB |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
Monocyte-derived M-CSF macrophages |
Peripheral_blood |
Primary cell |
GEO |
GSE84617 |
GPL13497 |
28093525 |
txt
|
| siRNA |
MAPK1 |
Homo sapiens |
UNKNOW |
UNKNOW |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
R1-D567 |
Prostate |
Cell line |
GEO |
GSE49196 |
GPL10904 |
24101480 |
txt
|
| siRNA |
MAPK14 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
GATA2 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE49342 |
GPL14550 |
24448395 |
txt
|
| siRNA |
MAX |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
MBD2 |
Homo sapiens |
Others |
TcoF-DB_TF |
HeLa |
Cervix |
Cell line |
GEO |
GSE41003 |
GPL6244 |
23361464 |
txt
|
| siRNA |
MBD3 |
Homo sapiens |
Others |
TcoF-DB_TF |
HeLa |
Cervix |
Cell line |
GEO |
GSE41003 |
GPL6244 |
23361464 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HaCaT RG |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE4975 |
GPL96 |
16885358 |
txt
|
| siRNA |
MCM2 |
Homo sapiens |
UNKNOW |
UNKNOW |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HaCaT RG |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE4975 |
GPL97 |
16885358 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SCC-1 |
Head_and_neck |
Cell line |
GEO |
GSE4975 |
GPL96 |
16885358 |
txt
|
| siRNA |
MEF2D |
Homo sapiens |
MADS box factors |
alpha-Helices exposed by beta-structures |
HuH7 |
Liver |
Cell line |
GEO |
GSE37123 |
GPL6480 |
- |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
Monocyte-derived M-CSF macrophages |
Peripheral_blood |
Primary cell |
GEO |
GSE180897 |
GPL23227 |
34670213 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SCC-1 |
Head_and_neck |
Cell line |
GEO |
GSE4975 |
GPL97 |
16885358 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MZ7 |
Skin |
Cell line |
GEO |
GSE71798 |
GPL10558 |
26530832 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HaCaT |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE4975 |
GPL570 |
16885358 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Ma-Mel-15 |
Skin |
Cell line |
GEO |
GSE71881 |
GPL10558 |
26530832 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SCC-012 |
Head_and_neck |
Cell line |
GEO |
GSE4975 |
GPL570 |
16885358 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Ma-Mel-15 |
Skin |
Cell line |
GEO |
GSE71886 |
GPL10558 |
26530832 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SCC-6 |
Head_and_neck |
Cell line |
GEO |
GSE4975 |
GPL570 |
16885358 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
SK-MEL-5 |
Skin |
Cell line |
GEO |
GSE75810 |
GPL16043 |
- |
txt
|
| siRNA |
MTA2 |
Homo sapiens |
Others |
Zinc-coordinating DNA-binding domains |
SGC-7901 |
Stomach |
Cell line |
GEO |
GSE65915 |
GPL18943 |
- |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD34+ progenitor cells |
Cord_Blood |
Primary cell |
GEO |
GSE13110 |
GPL96 |
20686118 |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
DU145 |
Prostate |
Cell line |
GEO |
GSE49286 |
GPL10558 |
24847116 |
txt
|
| siRNA |
ATF2 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE50165 |
GPL6884 |
- |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE49286 |
GPL10558 |
24847116 |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
PC-3M |
Prostate |
Cell line |
GEO |
GSE49286 |
GPL10558 |
24847116 |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
OCI-Ly10 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE51382 |
GPL570 |
25267198 |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE49286 |
GPL10558 |
24847116 |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
OCI-Ly1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE51382 |
GPL570 |
25267198 |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD34+ cells |
Cord_Blood |
Primary cell |
GEO |
GSE60299 |
GPL13667 |
- |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
OCI-Ly7 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE51382 |
GPL570 |
25267198 |
txt
|
| siRNA |
MYBL2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
HMG20A |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE193476 |
GPL18573 |
36124662 |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE51461 |
GPL14550 |
- |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HT29 |
Colon |
Cell line |
GEO |
GSE104175 |
GPL570 |
30018738 |
txt
|
| siRNA |
PHF14 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE193476 |
GPL18573 |
36124662 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
DAOY M2.1 |
Central_nervous_system |
Cell line |
GEO |
GSE22139 |
GPL570 |
21317922 |
txt
|
| siRNA |
PURA |
Homo sapiens |
Others |
TcoF-DB_TF |
HeLa |
Cervix |
Cell line |
GEO |
GSE193900 |
GPL18460 |
36651277 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
B-cell lymphoma cell line BL41 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE30726 |
GPL96 |
22102868 |
txt
|
| siRNA |
FOSL1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MSKPCa3 |
Prostate |
Cell line |
GEO |
GSE196813 |
GPL24676 |
35617398 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
B-cell lymphoma cell line Blue1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE30726 |
GPL96 |
22102868 |
txt
|
| siRNA |
LIN28A |
Homo sapiens |
Others |
beta-Scaffold Factors |
H9 |
Embryo |
Stem cell |
GEO |
GSE53038 |
GPL16699 |
25479749 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
B-cell lymphoma cell lines Raji |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE30726 |
GPL96 |
22102868 |
txt
|
| siRNA |
ERG |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE53994 |
GPL10558 |
24591637 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
CBX2 |
Homo sapiens |
Chromobox |
Chromatin Remodeling Factors |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE198417 |
GPL24676 |
35884550 |
txt
|
| siRNA |
CBX2 |
Homo sapiens |
Chromobox |
Chromatin Remodeling Factors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE198418 |
GPL24676 |
35884550 |
txt
|
| siRNA |
OGT |
Homo sapiens |
Others |
TcoF-DB_TcoF |
BeWo cells |
Embryo |
Cell line |
GEO |
GSE200983 |
GPL20301 |
- |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
SKNBE2 |
Autonomic_ganglia |
Cell line |
GEO |
GSE45967 |
GPL13158 |
25925418 30388705 28684529 |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
NB1691 |
Brain |
Cell line |
GEO |
GSE49854 |
GPL13158 |
30388705 |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
BE(2)C cells |
Brain |
Cell line |
GEO |
GSE71060 |
GPL16686 |
26537256 |
txt
|
| siRNA |
PPARG |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Valvular endothelial cell |
Aortic_valve |
Cell line |
GEO |
GSE206927 |
GPL24676 |
36115863 |
txt
|
| siRNA |
KLF9 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE54699 |
GPL10558 |
25330987 |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
BE(2)C cells |
Brain |
Cell line |
GEO |
GSE71061 |
GPL16686 |
26537256 |
txt
|
| siRNA |
SREBF2 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE207787 |
GPL11154 |
- |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE55204 |
GPL96 |
25213081 |
txt
|
| siRNA |
NCOA1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
NCOA2 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
HAND1 |
Homo sapiens |
bHLH |
Basic Domains Group |
HPMVEC |
Placenta |
Cell line |
GEO |
GSE210318 |
GPL21697 |
- |
txt
|
| siRNA |
NCOA3 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
NCOR1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE60722 |
GPL570 |
- |
txt
|
| siRNA |
NCOR2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Primary human macrophages |
Blood |
Cell line |
GEO |
GSE56989 |
GPL6244 |
25450522 |
txt
|
| siRNA |
NFAT5 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
Primary fibroblast-like synoviocytes |
Synovial |
Primary cell |
GEO |
GSE22956 |
GPL6883 |
21717420 |
txt
|
| siRNA |
ESR2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
BT549 |
Mammary_gland |
Cell line |
GEO |
GSE57379 |
GPL11532 |
- |
txt
|
| siRNA |
NFAT5 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE22956 |
GPL6947 |
21717420 |
txt
|
| siRNA |
NFKB1 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Adipose stem cells |
White_adipose_tissue |
Stem cell |
GEO |
GSE57538 |
GPL13158 |
25437437 |
txt
|
| siRNA |
NFKB1 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
U251 |
Central_nervous_system |
Cell line |
GEO |
GSE75003 |
GPL570 |
27426982 |
txt
|
| siRNA |
ZEB1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
HeLa229 |
Cervix |
Cell line |
GEO |
GSE57660 |
GPL570 |
24845104 |
txt
|
| siRNA |
NFYB |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
SUDHL6 DLBCL |
Lymph |
Cell line |
GEO |
GSE66714 |
GPL10558 |
26589882 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE58309 |
GPL6244 |
25228652 |
txt
|
| siRNA |
NMI |
Homo sapiens |
Others |
Other Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE58309 |
GPL6244 |
25228652 |
txt
|
| siRNA |
NPAT |
Homo sapiens |
Others |
Co-activator/repressors |
hTERT-RPE1 |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
LIN28A |
Homo sapiens |
Others |
beta-Scaffold Factors |
MCF7M |
Mammary_gland |
Cell line |
GEO |
GSE71012 |
GPL11154 |
26149387 |
txt
|
| siRNA |
ZNF658 |
Homo sapiens |
Others |
Zinc-coordinating DNA-binding domains |
Caco-2 |
Colon |
Cell line |
GEO |
GSE59385 |
GPL10558 |
25582195 |
txt
|
| siRNA |
NPAT |
Homo sapiens |
Others |
Co-activator/repressors |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
LIN28A |
Homo sapiens |
Others |
beta-Scaffold Factors |
MCF7M |
Mammary_gland |
Cell line |
GEO |
GSE71013 |
GPL11154 |
26149387 |
txt
|
| siRNA |
FOXC2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Lymphatic endothelial cells |
Lymph |
Primary cell |
GEO |
GSE60152 |
GPL6244 |
26389677 |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Primary eutopic stromal cells |
Uterus |
Primary cell |
GEO |
GSE107469 |
GPL570 |
29982401 |
txt
|
| siRNA |
WHSC1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE84868 |
GPL20301 |
- |
txt
|
| siRNA |
NR4A3 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
1.1B4 |
Pancreas |
Cell line |
GEO |
GSE86924 |
GPL13497 |
- |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE86532 |
GPL9052 |
27728805 |
txt
|
| siRNA |
NFYB |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
U2OS ER-HA-E2F1 |
Bone_marrow |
Cell line |
GEO |
GSE61272 |
GPL571 |
26039627 |
txt
|
| siRNA |
OSR1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE87534 |
GPL16791 |
29896299 |
txt
|
| siRNA |
PARK7 |
Homo sapiens |
Others |
Other Cofactors |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
PAX3 |
Homo sapiens |
Paired box factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE95144 |
GPL18573 |
- |
txt
|
| siRNA |
TCF4 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CTXOE03 |
Brain |
Cell line |
GEO |
GSE62085 |
GPL10558 |
27689884 |
txt
|
| siRNA |
PBX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE28006 |
GPL10558 |
22125492 |
txt
|
| siRNA |
EGR2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
A673 |
Muscle |
Cell line |
GEO |
GSE62090 |
GPL19264 |
26214589 |
txt
|
| siRNA |
PBX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
LTED |
Mammary_gland |
Cell line |
GEO |
GSE36928 |
GPL10558 |
23576735 |
txt
|
| siRNA |
EGR2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SK-N-MC |
Neuroepithelium |
Cell line |
GEO |
GSE62090 |
GPL19264 |
26214589 |
txt
|
| siRNA |
PBX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE39418 |
GPL10558 |
23576735 |
txt
|
| siRNA |
ETS1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
ALLSIL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE62135 |
GPL19197 |
26108691 |
txt
|
| siRNA |
PCNA |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
ALLSIL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE62140 |
GPL19197 |
26108691 |
txt
|
| siRNA |
TLX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
ALLSIL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE62141 |
GPL19197 |
26108691 |
txt
|
| siRNA |
POLR2A |
Homo sapiens |
Others |
General Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
GATA6 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
HT29 |
Colon |
Cell line |
GEO |
GSE62316 |
GPL16686 |
26387746 |
txt
|
| siRNA |
PPARG |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
GM-CSF Macrophage |
Peripheral_blood |
Primary cell |
GEO |
GSE88768 |
GPL21185 |
29434585 |
txt
|
| siRNA |
SMAD2 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
Hep3B |
Liver |
Cell line |
GEO |
GSE6242 |
GPL4525 |
- |
txt
|
| siRNA |
PRRX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
SMAD3 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
Hep3B |
Liver |
Cell line |
GEO |
GSE6242 |
GPL4525 |
- |
txt
|
| siRNA |
SMAD4 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
Hep3B |
Liver |
Cell line |
GEO |
GSE6242 |
GPL4525 |
- |
txt
|
| siRNA |
RARA |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE22213 |
GPL6947 |
20080953 |
txt
|
| siRNA |
RB1 |
Homo sapiens |
Others |
Co-activator/repressors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
RBL2 |
Homo sapiens |
Others |
Co-activator/repressors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE122918 |
GPL17586 |
32514071 |
txt
|
| siRNA |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE144397 |
GPL17586 |
32514071 |
txt
|
| siRNA |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
RELB |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
MIA PaCa-2 |
Pancreas |
Cell line |
GEO |
GSE35463 |
GPL6244 |
22565310 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE10061 |
GPL3921 |
18631401 |
txt
|
| siRNA |
RELB |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
HaCaT |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE97783 |
GPL10558 |
30037996 |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
H295R/TR |
Adrenal_gland |
Cell line |
GEO |
GSE43033 |
GPL6244 |
23907384 |
txt
|
| siRNA |
POU5F1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
GBS6 |
Bone_marrow |
Cell line |
GEO |
GSE12320 |
GPL570 |
20203285 |
txt
|
| siRNA |
NFKB2 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
L-1236 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE64234 |
GPL6244 |
26988706 |
txt
|
| siRNA |
SATB1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE17241 |
GPL6102 |
20522714 |
txt
|
| siRNA |
PROX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Primary lymphatic endothelial cells |
Foreskin |
Primary cell |
GEO |
GSE12846 |
GPL570 |
18815287 |
txt
|
| siRNA |
SATB1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE17241 |
GPL6106 |
20522714 |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Primary lymphatic endothelial cells |
Foreskin |
Primary cell |
GEO |
GSE12846 |
GPL570 |
18815287 |
txt
|
| siRNA |
SMAD7 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
WT1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
PLC/PRF/5 |
Liver |
Cell line |
GEO |
GSE12886 |
GPL570 |
19190340 |
txt
|
| siRNA |
SMARCA4 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
BCL11A |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
CD34-derived erythroid progenitors |
Peripheral_blood |
Primary cell |
GEO |
GSE13284 |
GPL570 |
19056937 |
txt
|
| siRNA |
SMARCC1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
SOX11 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
NHLF |
Lung_fibroblast |
Cell line |
GEO |
GSE104937 |
GPL20844 |
30076218 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
U251 |
Central_nervous_system |
Cell line |
GEO |
GSE13991 |
GPL1426 |
19139068 |
txt
|
| siRNA |
FOXO3 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
PANC1 |
Pancreas |
Cell line |
GEO |
GSE66404 |
GPL17077 |
- |
txt
|
| siRNA |
SOX11 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
NHLF |
Lung_fibroblast |
Cell line |
GEO |
GSE124781 |
GPL20844 |
31505128 |
txt
|
| siRNA |
OTX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Neural precursor cells |
Brain |
Cell line |
GEO |
GSE66671 |
GPL16686 |
- |
txt
|
| siRNA |
SOX11 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Granta 519 |
Lymph |
Cell line |
GEO |
GSE25621 |
GPL6244 |
21124928 |
txt
|
| siRNA |
SIX4 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
PEO1 |
Ovary |
Cell line |
GEO |
GSE67327 |
GPL10558 |
- |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
H520 |
Lung |
Cell line |
GEO |
GSE48871 |
GPL6947 |
24477565 |
txt
|
| siRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE67390 |
GPL10558 |
28904225 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
LK2 |
Lung |
Cell line |
GEO |
GSE48871 |
GPL6947 |
24477565 |
txt
|
| siRNA |
SF1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
OsisHESC |
Endometrial_tissue |
Tissue |
GEO |
GSE67524 |
GPL16699 |
27018534 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
2102Ep |
Embryo |
Cell line |
GEO |
GSE59234 |
GPL6244 |
25156079 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
NTera-2 |
Embryo |
Cell line |
GEO |
GSE59234 |
GPL6244 |
25156079 |
txt
|
| siRNA |
ERG |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE14801 |
GPL570 |
19359602 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
GSC-11 |
Mammary_gland |
Cell line |
GEO |
GSE79302 |
GPL13607 |
27669421 |
txt
|
| siRNA |
SOX4 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
ST1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE38021 |
GPL570 |
23482931 |
txt
|
| siRNA |
SOX4 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
MDA-LM2 |
Mammary_gland |
Cell line |
GEO |
GSE79202 |
GPL10558 |
- |
txt
|
| siRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
HTB58 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE16238 |
GPL570 |
- |
txt
|
| siRNA |
SP1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE37935 |
GPL570 |
23018034 |
txt
|
| siRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
TF-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE16238 |
GPL570 |
- |
txt
|
| siRNA |
SP1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE48979 |
GPL6947 |
- |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
NZM15 |
Skin |
Cell line |
GEO |
GSE16249 |
GPL570 |
- |
txt
|
| siRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
C4-2B |
Prostate |
Cell line |
ENCODE |
ENCSR244ZVP |
- |
22955616 |
txt
|
| siRNA |
SP1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
OVSAYO |
Ovary |
Cell line |
GEO |
GSE55563 |
GPL4133 |
25879517 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
NZM12 |
Skin |
Cell line |
GEO |
GSE16249 |
GPL570 |
- |
txt
|
| siRNA |
MSX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Dental Pulp Cells |
Tooth |
Primary cell |
GEO |
GSE69992 |
GPL17077 |
- |
txt
|
| siRNA |
MXI1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR631RKH |
- |
22955616 |
txt
|
| siRNA |
SP100 |
Homo sapiens |
SAND domain factors |
alpha-Helices exposed by beta-structures |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
PAX3 |
Homo sapiens |
Paired box factors |
Helix-turn-helix domains |
NZM15 |
Skin |
Cell line |
GEO |
GSE16249 |
GPL570 |
- |
txt
|
| siRNA |
IRF7 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Primary human bronchial epithelial cells |
Bronchus |
Primary cell |
GEO |
GSE70190 |
GPL20609 |
26810609 |
txt
|
| siRNA |
NFE2L2 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR100ODO |
- |
22955616 |
txt
|
| siRNA |
SPIB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
OCI-Ly3 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE50015 |
GPL10558 |
24875472 |
txt
|
| siRNA |
PAX3 |
Homo sapiens |
Paired box factors |
Helix-turn-helix domains |
NZM12 |
Skin |
Cell line |
GEO |
GSE16249 |
GPL570 |
- |
txt
|
| siRNA |
AHR |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
THP-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE70200 |
GPL16686 |
26416282 |
txt
|
| siRNA |
LMNA |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR071JWS |
- |
22955616 |
txt
|
| siRNA |
SRF |
Homo sapiens |
MADS box factors |
alpha-Helices exposed by beta-structures |
LNCaP |
Prostate |
Cell line |
GEO |
GSE22606 |
GPL570 |
21324924 |
txt
|
| siRNA |
ZIC5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
A375 |
Skin |
Cell line |
GEO |
GSE70223 |
GPL570 |
27671679 |
txt
|
| siRNA |
CEBPZ |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR977SOT |
- |
22955616 |
txt
|
| siRNA |
SSRP1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
BE(2)C cells |
Brain |
Cell line |
GEO |
GSE71059 |
GPL16686 |
26537256 |
txt
|
| siRNA |
ATM |
Homo sapiens |
Others |
ENCODE_TF |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE1676 |
GPL201 |
15892871 |
txt
|
| siRNA |
ZIC5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SK-MEL-28 |
Skin |
Cell line |
GEO |
GSE70223 |
GPL570 |
27671679 |
txt
|
| siRNA |
ZNF180 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR555CYH |
- |
22955616 |
txt
|
| siRNA |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE1676 |
GPL201 |
15892871 |
txt
|
| siRNA |
TBL1XR1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR989NEA |
- |
22955616 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE1676 |
GPL201 |
15892871 |
txt
|
| siRNA |
VEZF1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR047MQO |
- |
22955616 |
txt
|
| siRNA |
STAT6 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE17851 |
GPL6102 |
20620947 |
txt
|
| siRNA |
ATF3 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR045TQN |
- |
22955616 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
CWR22Rv1 |
Prostate |
Cell line |
GEO |
GSE17482 |
GPL570 |
- |
txt
|
| siRNA |
ATF3 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE18457 |
GPL4133 |
22046379 |
txt
|
| siRNA |
ZMIZ1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR509YMP |
- |
22955616 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
DU145 |
Prostate |
Cell line |
GEO |
GSE17482 |
GPL570 |
- |
txt
|
| siRNA |
EGR3 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE18913 |
GPL570 |
19965691 |
txt
|
| siRNA |
SP3 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE7102 |
GPL571 |
- |
txt
|
| siRNA |
STAT5A |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR174FUO |
- |
22955616 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE20597 |
GPL6947 |
- |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
BT549 |
Mammary_gland |
Cell line |
GEO |
GSE71977 |
GPL11532 |
26792858 |
txt
|
| siRNA |
MAFK |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR640PVZ |
- |
22955616 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
SNAI2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCFDCIS |
Mammary_gland |
Cell line |
GEO |
GSE72011 |
GPL10558 |
- |
txt
|
| siRNA |
KAT2B |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR576FFB |
- |
22955616 |
txt
|
| siRNA |
STAT5B |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SKBR3 |
Mammary_gland |
Cell line |
GEO |
GSE19670 |
GPL570 |
20227041 |
txt
|
| siRNA |
CTCF |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR067CAG |
- |
22955616 |
txt
|
| siRNA |
STAT6 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE28117 |
GPL570 |
21464207 |
txt
|
| siRNA |
RELB |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
A549 |
Lung |
Cell line |
GEO |
GSE73158 |
GPL10558 |
- |
txt
|
| siRNA |
BHLHE40 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR626SFM |
- |
22955616 |
txt
|
| siRNA |
TBX3 |
Homo sapiens |
T-Box factors |
Immunoglobulin fold |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
TFAP4 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
BE(2)-C |
Brain |
Cell line |
GEO |
GSE74626 |
GPL570 |
27448979 |
txt
|
| siRNA |
CHD1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR181AXM |
- |
22955616 |
txt
|
| siRNA |
TCEA1 |
Homo sapiens |
Others |
General Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
BE(2)-C |
Brain |
Cell line |
GEO |
GSE74626 |
GPL570 |
27448979 |
txt
|
| siRNA |
BACH1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR793ISR |
- |
22955616 |
txt
|
| siRNA |
TCF7L1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
H9 |
Embryo |
Stem cell |
GEO |
GSE69911 |
GPL6244 |
29361574 |
txt
|
| siRNA |
EP300 |
Homo sapiens |
Others |
ENCODE_TF |
KYSE150 |
Oesophagus |
Cell line |
GEO |
GSE74742 |
GPL17586 |
- |
txt
|
| siRNA |
MAFG |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR136ZPD |
- |
22955616 |
txt
|
| siRNA |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
NCCIT |
Embryo |
Cell line |
GEO |
GSE51901 |
GPL6244 |
24958354 |
txt
|
| siRNA |
RAD21 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR051NHG |
- |
22955616 |
txt
|
| siRNA |
TET2 |
Homo sapiens |
Others |
TcoF-DB_TF |
NCCIT |
Embryo |
Cell line |
GEO |
GSE51901 |
GPL6244 |
24958354 |
txt
|
| siRNA |
SOX7 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE75380 |
GPL13497 |
- |
txt
|
| siRNA |
LMNB2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR669QED |
- |
22955616 |
txt
|
| siRNA |
TET2 |
Homo sapiens |
Others |
TcoF-DB_TF |
DU145 |
Prostate |
Cell line |
GEO |
GSE66038 |
GPL6244 |
- |
txt
|
| siRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Primary CD14-myeloblasts |
Cord_blood |
Primary cell |
GEO |
GSE21943 |
GPL96 |
20686118 |
txt
|
| siRNA |
SOX17 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE75380 |
GPL13497 |
- |
txt
|
| siRNA |
MAX |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR675SDG |
- |
22955616 |
txt
|
| siRNA |
TET2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66038 |
GPL6244 |
- |
txt
|
| siRNA |
ARID3A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR169DSM |
- |
22955616 |
txt
|
| siRNA |
TET3 |
Homo sapiens |
Others |
TcoF-DB_TF |
NCCIT |
Embryo |
Cell line |
GEO |
GSE51901 |
GPL6244 |
24958354 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
LN229 |
Central_nervous_system |
Cell line |
GEO |
GSE23838 |
GPL1426 |
21211035 |
txt
|
| siRNA |
TCP1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR301SWM |
- |
22955616 |
txt
|
| siRNA |
TFAP2C |
Homo sapiens |
Basic helix-span-helix factors (bHSH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE8640 |
GPL570 |
17875680 |
txt
|
| siRNA |
LMNB1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR656ZOI |
- |
22955616 |
txt
|
| siRNA |
TFE3 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
UOK257-2 |
Kidney |
Cell line |
GEO |
GSE23614 |
GPL570 |
18206534 |
txt
|
| siRNA |
ETV5 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
hADSC |
Soft_tissue |
Stem cell |
GEO |
GSE75692 |
GPL10558 |
27732649 |
txt
|
| siRNA |
CHD2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR261IHP |
- |
22955616 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
DU145 |
Prostate |
Cell line |
GEO |
GSE25867 |
GPL571 |
23288901 |
txt
|
| siRNA |
CDAN1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR472UFW |
- |
22955616 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
Neonatal foreskin keratinocytes |
Foreskin |
Primary cell |
GEO |
GSE56640 |
GPL18627 |
24823795 |
txt
|
| siRNA |
STAT6 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
NCI-H460 |
Lung |
Cell line |
GEO |
GSE25942 |
GPL6884 |
22162773 |
txt
|
| siRNA |
UBTF |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR312FIT |
- |
22955616 |
txt
|
| siRNA |
RARA |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE26298 |
GPL570 |
21299862 |
txt
|
| siRNA |
MAZ |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR129WCZ |
- |
22955616 |
txt
|
| siRNA |
SOX9 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE76441 |
GPL570 |
27043282 |
txt
|
| siRNA |
E2F4 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR874ZXG |
- |
22955616 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
Primary neonatal keratinocytes |
Skin |
Primary cell |
GEO |
GSE33495 |
GPL570 |
22922031 |
txt
|
| siRNA |
TFAP2C |
Homo sapiens |
Basic helix-span-helix factors (bHSH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE26740 |
GPL6883 |
21572391 |
txt
|
| siRNA |
SOX9 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE76452 |
GPL570 |
27043282 |
txt
|
| siRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR336ZWX |
- |
22955616 |
txt
|
| siRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
Neonatal foreskin keratinocytes |
Foreskin |
Primary cell |
GEO |
GSE56640 |
GPL18627 |
24823795 |
txt
|
| siRNA |
PITX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
TM1 |
Eye |
Primary cell |
GEO |
GSE27275 |
GPL6883 |
- |
txt
|
| siRNA |
MTF1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Caco-2 |
Colon |
Cell line |
GEO |
GSE76510 |
GPL10558 |
26824222 |
txt
|
| siRNA |
BRCA1 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR205BWT |
- |
22955616 |
txt
|
| siRNA |
TWIST1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MSCs |
Bone_marrow |
Stem cell |
GEO |
GSE76158 |
GPL16686 |
- |
txt
|
| siRNA |
PITX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
TM2 |
Eye |
Primary cell |
GEO |
GSE27275 |
GPL6883 |
- |
txt
|
| siRNA |
BRD4 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
Ovcar8 |
Ovary |
Cell line |
GEO |
GSE78704 |
GPL570 |
- |
txt
|
| siRNA |
ZNF384 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR965CCM |
- |
22955616 |
txt
|
| siRNA |
TWIST2 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
TFAP2C |
Homo sapiens |
Basic helix-span-helix factors (bHSH) |
Basic domains |
NCI-H292 |
Lung |
Cell line |
GEO |
GSE79228 |
GPL16686 |
- |
txt
|
| siRNA |
RCOR1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR390GWL |
- |
22955616 |
txt
|
| siRNA |
WT1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZEB2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE27966 |
GPL570 |
- |
txt
|
| siRNA |
OVOL2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Corneal epithelial cells |
Corneal_epithelial |
Primary cell |
GEO |
GSE79251 |
GPL14550 |
- |
txt
|
| siRNA |
E2F6 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR820EGA |
- |
22955616 |
txt
|
| siRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
ENCODE |
ENCSR005AHI |
- |
22955616 |
txt
|
| siRNA |
ZNF165 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SUM159 |
Mammary_gland |
Cell line |
GEO |
GSE63984 |
GPL11532 |
- |
txt
|
| siRNA |
BACH1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE28050 |
GPL570 |
21555518 |
txt
|
| siRNA |
ARNT |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HSC3 |
Upper_aerodigestive_tract |
Cell line |
GEO |
GSE80347 |
GPL2895 |
- |
txt
|
| siRNA |
ABL1 |
Homo sapiens |
Others |
Other Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZNF165 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
WHIM12 |
Mammary_gland |
Cell line |
GEO |
GSE63984 |
GPL11532 |
- |
txt
|
| siRNA |
NFE2L2 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
A549 |
Lung |
Cell line |
GEO |
GSE28230 |
GPL4133 |
22789539 |
txt
|
| siRNA |
ERG |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE80395 |
GPL10558 |
27273514 |
txt
|
| siRNA |
AKT1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZNF263 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HeLaS3 |
Cervix |
Cell line |
GEO |
GSE19146 |
GPL6884 |
19887448 |
txt
|
| siRNA |
GATA2 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
HMVEC |
Endothelium |
Cell line |
GEO |
GSE28304 |
GPL570 |
21666600 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
abl cells |
Prostate |
Cell line |
GEO |
GSE11428 |
GPL570 |
19632176 |
txt
|
| siRNA |
ZNF554 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
BeWo cells |
Embryo |
Cell line |
GEO |
GSE65866 |
GPL10558 |
30135684 |
txt
|
| siRNA |
RUNX2 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
MCF7VP |
Mammary_gland |
Cell line |
GEO |
GSE28414 |
GPL570 |
- |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE11428 |
GPL570 |
19632176 |
txt
|
| siRNA |
ZNF554 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HTR8/Svneo |
Embryo |
Cell line |
GEO |
GSE65940 |
GPL10558 |
30135684 |
txt
|
| siRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
A549 |
Lung |
Cell line |
GEO |
GSE28433 |
GPL6104 |
22205655 |
txt
|
| siRNA |
ZNF25 |
Homo sapiens |
Others |
Zinc-coordinating DNA-binding domains |
hMSC-TERT4 |
Bone_marrow |
Cell line |
GEO |
GSE83901 |
GPL16686 |
27814695 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE115270 |
GPL15207 |
30557851 |
txt
|
| siRNA |
ZNF746 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE90832 |
GPL13497 |
- |
txt
|
| siRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE28433 |
GPL6104 |
22205655 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE32892 |
GPL570 |
22849360 |
txt
|
| siRNA |
ZNF750 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Primary neonatal keratinocytes |
Skin |
Primary cell |
GEO |
GSE32685 |
GPL570 |
22364861 |
txt
|
| siRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE28433 |
GPL6104 |
22205655 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
CWR22Rv1 |
Prostate |
Cell line |
GEO |
GSE49285 |
GPL10558 |
24847116 |
txt
|
| siRNA |
MBD5 |
Homo sapiens |
Others |
TcoF-DB_TF |
HCCC-9810 |
Bile_duct |
Cell line |
GEO |
GSE111817 |
GPL15207 |
- |
txt
|
| siRNA |
NKX2-1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
HCC4019 |
Lung |
Cell line |
GEO |
GSE28480 |
GPL6947 |
21907921 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE49285 |
GPL10558 |
24847116 |
txt
|
| siRNA |
PATZ1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE113859 |
GPL10558 |
33598459 |
txt
|
| siRNA |
NKX2-1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
H3255 |
Lung |
Cell line |
GEO |
GSE28480 |
GPL6947 |
21907921 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE49285 |
GPL10558 |
24847116 |
txt
|
| siRNA |
PATZ1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE114039 |
GPL10558 |
33598459 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE87693 |
GPL20844 |
28847964 |
txt
|
| siRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
SNAI1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
A549 |
Lung |
Cell line |
GEO |
GSE28558 |
GPL6947 |
20887892 |
txt
|
| siRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
SAS cells |
Oral_cavity |
Cell line |
GEO |
GSE129475 |
GPL16686 |
- |
txt
|
| siRNA |
HOXD9 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
U87 |
Central_nervous_system |
Cell line |
GEO |
GSE28618 |
GPL570 |
21600039 |
txt
|
| siRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
MDA-MB-157 |
Mammary_gland |
Cell line |
GEO |
GSE72669 |
GPL16699 |
28123592 |
txt
|
| siRNA |
AEBP1 |
Homo sapiens |
Others |
Other Cofactors |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE138427 |
GPL16699 |
32086986 |
txt
|
| siRNA |
ELF5 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HCC1937 |
Mammary_gland |
Cell line |
GEO |
GSE30405 |
GPL6244 |
23300383 |
txt
|
| siRNA |
SMARCA4 |
Homo sapiens |
Others |
TcoF-DB_TF |
HCT116 |
Colon |
Cell line |
GEO |
GSE143198 |
GPL21185 |
33853662 |
txt
|
| siRNA |
ASCL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
DMS79 |
Lung |
Cell line |
GEO |
GSE21216 |
GPL570 |
21737174 |
txt
|
| siRNA |
SMARCA4 |
Homo sapiens |
Others |
TcoF-DB_TF |
HCT116 |
Colon |
Cell line |
GEO |
GSE143199 |
GPL21185 |
33853662 |
txt
|
| siRNA |
CEBPD |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
ATF4 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
A375 |
Skin |
Cell line |
GEO |
GSE136614 |
GPL570 |
32283529 |
txt
|
| siRNA |
CEBPZ |
Homo sapiens |
Others |
TcoF-DB_TF |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
ATOH8 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE104684 |
GPL570 |
31719172 |
txt
|
| siRNA |
ETS1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
ATR |
Homo sapiens |
UNKNOW |
UNKNOW |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
HOXC6 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE9182 |
GPL96 |
- |
txt
|
| siRNA |
BATF3 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
L428 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE89760 |
GPL16043 |
28878352 |
txt
|
| siRNA |
HSF2 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
LX-2 |
Liver |
Cell line |
GEO |
GSE92638 |
GPL19251 |
28154170 |
txt
|
| siRNA |
BCL6 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
BRCA1 |
Homo sapiens |
Others |
TcoF-DB_TF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE40730 |
GPL570 |
23805307 |
txt
|
| siRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
NFE2L2 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
A549 |
Lung |
Cell line |
GEO |
GSE94393 |
GPL15207 |
29050246 |
txt
|
| siRNA |
BCL6 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
OCI-Ly7 DLBCL |
Lymph |
Cell line |
GEO |
GSE45838 |
GPL570 |
27322546 |
txt
|
| siRNA |
LITAF |
Homo sapiens |
zf-LITAF-like |
Zinc-Coordinating Group |
KARPAS-231 |
Lymph |
Cell line |
GEO |
GSE42174 |
GPL570 |
- |
txt
|
| siRNA |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
GRHL3 |
Homo sapiens |
Grainyhead domain factors |
Immunoglobulin fold |
NHEK |
Skin |
Cell line |
GEO |
GSE94465 |
GPL6244 |
28445475 |
txt
|
| siRNA |
BCL6 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Pfeiffer DLBCL |
Lymph |
Cell line |
GEO |
GSE45838 |
GPL570 |
27322546 |
txt
|
| siRNA |
LITAF |
Homo sapiens |
zf-LITAF-like |
Zinc-Coordinating Group |
VAL |
Lymph |
Cell line |
GEO |
GSE42174 |
GPL570 |
- |
txt
|
| siRNA |
SP1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
NHEK |
Skin |
Cell line |
GEO |
GSE94466 |
GPL6244 |
28445475 |
txt
|
| siRNA |
BCL6 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
U87 |
Central_nervous_system |
Cell line |
GEO |
GSE77053 |
GPL10558 |
28356518 |
txt
|
| siRNA |
SP100 |
Homo sapiens |
SAND domain factors |
alpha-Helices exposed by beta-structures |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
NHEK |
Skin |
Cell line |
GEO |
GSE94467 |
GPL6244 |
28445475 |
txt
|
| siRNA |
BRCA1 |
Homo sapiens |
Others |
TcoF-DB_TF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
NFAT5 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
HUASMCs |
Umbilical_cords |
Primary cell |
GEO |
GSE106274 |
GPL23644 |
30190682 |
txt
|
| siRNA |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
KLF4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCE |
Embryo |
Stem cell |
GEO |
GSE94468 |
GPL6244 |
- |
txt
|
| siRNA |
BRCA2 |
Homo sapiens |
Others |
Other Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
KLF7 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCE |
Embryo |
Stem cell |
GEO |
GSE94469 |
GPL6244 |
- |
txt
|
| siRNA |
CASP8AP2 |
Homo sapiens |
Others |
Other Cofactors |
hTERT-RPE1 |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
Hec-1A |
Uterus |
Cell line |
GEO |
GSE115010 |
GPL10558 |
- |
txt
|
| siRNA |
STAT6 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
A375 |
Skin |
Cell line |
GEO |
GSE31534 |
GPL570 |
22536322 |
txt
|
| siRNA |
KLF4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCE |
Embryo |
Stem cell |
GEO |
GSE94470 |
GPL16686 |
- |
txt
|
| siRNA |
CASP8AP2 |
Homo sapiens |
Others |
Other Cofactors |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE3188 |
GPL570 |
16565084 |
txt
|
| siRNA |
KLF7 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCE |
Embryo |
Stem cell |
GEO |
GSE94470 |
GPL16686 |
- |
txt
|
| siRNA |
CCNA2 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE3188 |
GPL2507 |
16565084 |
txt
|
| siRNA |
CDK2 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
DNMT1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
IMR-90 |
Lung_fibroblast |
Cell line |
GEO |
GSE120641 |
GPL6480 |
32057913 |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE32968 |
GPL6480 |
24023716 |
txt
|
| siRNA |
CEBPA |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
A549 |
Lung |
Cell line |
GEO |
GSE121647 |
GPL10558 |
- |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE33182 |
GPL570 |
23201680 |
txt
|
| siRNA |
CEBPB |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
H1299 |
Lung |
Cell line |
GEO |
GSE121647 |
GPL10558 |
- |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE33301 |
GPL570 |
22734039 |
txt
|
| siRNA |
CEBPB |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
hESC |
Embryo |
Stem cell |
GEO |
GSE41473 |
GPL571 |
23097472 |
txt
|
| siRNA |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
A549 |
Lung |
Cell line |
GEO |
GSE121649 |
GPL10558 |
- |
txt
|
| siRNA |
ETV6 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LOUCY |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE33820 |
GPL10558 |
22162831 |
txt
|
| siRNA |
GATA3 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
OEC-M1 |
Oral_cavity |
Cell line |
GEO |
GSE76581 |
GPL21185 |
- |
txt
|
| siRNA |
CEBPD |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
H1299 |
Lung |
Cell line |
GEO |
GSE121649 |
GPL10558 |
- |
txt
|
| siRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
OEC-M1 |
Oral_cavity |
Cell line |
GEO |
GSE76581 |
GPL21185 |
- |
txt
|
| siRNA |
CENPF |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE125339 |
GPL25684 |
- |
txt
|
| siRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
SKNO-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE34594 |
GPL10558 |
22343733 |
txt
|
| siRNA |
CHEK1 |
Homo sapiens |
Others |
Other Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Undifferentiated hESCs |
Embryo |
Stem cell |
GEO |
GSE67993 |
GPL10558 |
26748419 |
txt
|
| siRNA |
SMAD2 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
BxPC-3 |
Pancreas |
Cell line |
GEO |
GSE8464 |
GPL4525 |
- |
txt
|
| siRNA |
CREBBP |
Homo sapiens |
Others |
Co-activator/repressors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE20381 |
GPL6947 |
20708159 |
txt
|
| siRNA |
SMAD3 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
BxPC-3 |
Pancreas |
Cell line |
GEO |
GSE8464 |
GPL4525 |
- |
txt
|
| siRNA |
CTCF |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE125436 |
GPL16686 |
31911579 |
txt
|
| siRNA |
PBX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE39417 |
GPL10558 |
23576735 |
txt
|
| siRNA |
ZNF24 |
Homo sapiens |
Others |
Zinc-coordinating DNA-binding domains |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE14273 |
GPL6480 |
- |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
abl cells |
Prostate |
Cell line |
GEO |
GSE39452 |
GPL570 |
23239736 |
txt
|
| siRNA |
ELK1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE18849 |
GPL4133 |
20005852 |
txt
|
| siRNA |
CTNNB1 |
Homo sapiens |
Others |
Co-activator/repressors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE39452 |
GPL570 |
23239736 |
txt
|
| siRNA |
FOS |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE36586 |
GPL14550 |
22791811 |
txt
|
| siRNA |
NFYA |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE18849 |
GPL4133 |
20005852 |
txt
|
| siRNA |
CTNNB1 |
Homo sapiens |
Others |
Co-activator/repressors |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
abl cells |
Prostate |
Cell line |
GEO |
GSE39461 |
GPL570 |
23239736 |
txt
|
| siRNA |
E2F1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE22209 |
GPL10379 |
20348445 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE39461 |
GPL570 |
23239736 |
txt
|
| siRNA |
CDX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
COLO320 |
Colon |
Cell line |
GEO |
GSE30181 |
GPL4133 |
23112155 |
txt
|
| siRNA |
E2F1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
HOXA10 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE35801 |
GPL15226 |
- |
txt
|
| siRNA |
E2F5 |
Homo sapiens |
Others |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
PIAS1 |
Homo sapiens |
zf-MIZ |
Zinc-Coordinating Group |
MDA-MB453 |
Mammary_gland |
Cell line |
GEO |
GSE70162 |
GPL10558 |
26219822 |
txt
|
| siRNA |
E2F7 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
SCC25 |
Upper_aerodigestive_tract |
Cell line |
GEO |
GSE58074 |
GPL10558 |
26018753 25411162 |
txt
|
| siRNA |
PIAS1 |
Homo sapiens |
zf-MIZ |
Zinc-Coordinating Group |
MDA-MB453 |
Mammary_gland |
Cell line |
GEO |
GSE70163 |
GPL10558 |
26219822 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE37314 |
GPL10558 |
23539448 |
txt
|
| siRNA |
SOX17 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE37395 |
GPL10332 |
23241958 |
txt
|
| siRNA |
EBF1 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
Fully differentiated adipocytes |
White_adipose_tissue |
Tissue |
GEO |
GSE42680 |
GPL11532 |
24856929 |
txt
|
| siRNA |
EP300 |
Homo sapiens |
Others |
ENCODE_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
GTF2B |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HeLa |
Cervix |
Cell line |
GEO |
GSE48847 |
GPL4133 |
- |
txt
|
| siRNA |
ERBB2 |
Homo sapiens |
Others |
Other Cofactors |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
BCL3 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
U87 |
Central_nervous_system |
Cell line |
GEO |
GSE80729 |
GPL10558 |
29973405 |
txt
|
| siRNA |
ERF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
AEBP1 |
Homo sapiens |
Others |
Other Cofactors |
U87MG |
Central_nervous_system |
Cell line |
GEO |
GSE18892 |
GPL570 |
22723309 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE73550 |
GPL571 |
26849466 |
txt
|
| siRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE30670 |
GPL6104 |
21884980 |
txt
|
| siRNA |
HOXA1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
IMR-90 |
Lung_fibroblast |
Cell line |
GEO |
GSE37690 |
GPL13607 |
23222703 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE73550 |
GPL6244 |
26849466 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE37820 |
GPL570 |
- |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE95165 |
GPL10558 |
31409898 |
txt
|
| siRNA |
HDAC1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE159839 |
GPL10558 |
33669024 |
txt
|
| siRNA |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
HSC3 |
Upper_aerodigestive_tract |
Cell line |
GEO |
GSE38058 |
GPL570 |
- |
txt
|
| siRNA |
ESRRA |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
GABPA |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
A549 |
Lung |
Cell line |
GEO |
GSE38332 |
GPL570 |
23921124 |
txt
|
| siRNA |
ETS1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE122918 |
GPL17586 |
32514071 |
txt
|
| siRNA |
ACTR5 |
Homo sapiens |
ACTR |
Chromatin Remodeling Factors |
RD |
Muscle |
Cell line |
GEO |
GSE169681 |
GPL20844 |
35348112 |
txt
|
| siRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
OE33 |
Oesophagus |
Cell line |
GEO |
GSE38380 |
GPL15207 |
23318448 |
txt
|
| siRNA |
ETS1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE144397 |
GPL17586 |
32514071 |
txt
|
| siRNA |
INO80 |
Homo sapiens |
INO80 complex |
Chromatin Remodeling Factors |
RD |
Muscle |
Cell line |
GEO |
GSE169681 |
GPL20844 |
35348112 |
txt
|
| siRNA |
ETV6 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
U251 |
Central_nervous_system |
Cell line |
GEO |
GSE75003 |
GPL570 |
27426982 |
txt
|
| siRNA |
HDAC4 |
Homo sapiens |
Histone deacetylase |
Histone-modifying Enzymes |
human hepatocytes |
Liver |
Tissue |
GEO |
GSE154554 |
GPL570 |
- |
txt
|
| siRNA |
FHL2 |
Homo sapiens |
Others |
Other Cofactors |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
HDAC5 |
Homo sapiens |
Histone deacetylase |
Histone-modifying Enzymes |
human hepatocytes |
Liver |
Tissue |
GEO |
GSE154554 |
GPL570 |
- |
txt
|
| siRNA |
ID1 |
Homo sapiens |
Others |
Basic domains |
A549 |
Lung |
Cell line |
GEO |
GSE38944 |
GPL570 |
- |
txt
|
| siRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
THP-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE144625 |
GPL26944 |
32508810 |
txt
|
| siRNA |
ID1 |
Homo sapiens |
Others |
Basic domains |
H1650 |
Lung |
Cell line |
GEO |
GSE38944 |
GPL570 |
- |
txt
|
| siRNA |
FOS |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
C4-2B |
Prostate |
Cell line |
GEO |
GSE102616 |
GPL20301 |
31515496 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE124270 |
GPL10558 |
31390833 |
txt
|
| siRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE102616 |
GPL20301 |
31515496 |
txt
|
| siRNA |
GATA3 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE39623 |
GPL6947 |
23172872 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE25315 |
GPL10558 |
21151129 |
txt
|
| siRNA |
ZIC2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
PANC1 |
Pancreas |
Cell line |
GEO |
GSE39704 |
GPL10332 |
26318045 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE25316 |
GPL10558 |
21151129 |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
U87 |
Central_nervous_system |
Cell line |
GEO |
GSE40051 |
GPL570 |
22977194 |
txt
|
| siRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE27682 |
GPL6102 |
21572438 |
txt
|
| siRNA |
ESR1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE108693 |
GPL11154 |
29462945 |
txt
|
| siRNA |
ZNF91 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXC1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZNF100 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXD1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
PARP1 |
Homo sapiens |
Others |
TcoF-DB_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE114273 |
GPL18573 |
31266892 |
txt
|
| siRNA |
ZNF43 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXF2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF10A |
Mammary_gland |
Cell line |
GEO |
GSE55675 |
GPL18387 |
30294731 27377963 |
txt
|
| siRNA |
ZNF85 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXF2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE55675 |
GPL18387 |
30294731 27377963 |
txt
|
| siRNA |
ZNF254 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXJ2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
ZNF431 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXK1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE67810 |
GPL6244 |
29186685 |
txt
|
| siRNA |
ZNF665 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Vascular smooth muscle cells |
Aorta |
Tissue |
GEO |
GSE17543 |
GPL570 |
19835856 |
txt
|
| siRNA |
ZNF708 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GIST-T1 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE40080 |
GPL5175 |
- |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
BT-20 cells |
Mammary_gland |
Cell line |
GEO |
GSE2222 |
GPL96 |
15958562 |
txt
|
| siRNA |
NCOA2 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE121584 |
GPL16791 |
30325183 |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
SUDHL6 DLBCL |
Lymph |
Cell line |
GEO |
GSE66714 |
GPL10558 |
26589882 |
txt
|
| siRNA |
NCOA3 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE126276 |
GPL16791 |
- |
txt
|
| siRNA |
EGR4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SBC-5 |
Lung |
Cell line |
GEO |
GSE40558 |
GPL6480 |
- |
txt
|
| siRNA |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
TE1 |
Oesophagus |
Cell line |
GEO |
GSE75243 |
GPL5175 |
29682174 |
txt
|
| siRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
T lymphocyte |
Peripheral_blood |
Cell line |
GEO |
GSE126739 |
GPL20301 |
33298911 |
txt
|
| siRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
primary human dermal lymphatic endothelial cells |
Skin |
Primary cell |
GEO |
GSE142608 |
GPL16699 |
- |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Smooth muscle cells |
Uterus |
In vitro differentiated cell |
GEO |
GSE41386 |
GPL570 |
23284171 |
txt
|
| siRNA |
FOXP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
GATA2 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Decidual stromal cells |
Uterus |
Primary cell |
GEO |
GSE108407 |
GPL570 |
30245028 |
txt
|
| siRNA |
GATA2 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
Lymphatic endothelial cells |
Lymph |
Primary cell |
GEO |
GSE110726 |
GPL17585 |
29666442 |
txt
|
| siRNA |
POLR3A |
Homo sapiens |
Others |
ENCODE_TF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE42239 |
GPL570 |
26067234 |
txt
|
| siRNA |
GATA3 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
GATA3 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE95165 |
GPL10558 |
31409898 |
txt
|
| siRNA |
NR3C1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Endometrial stromal cells |
Uterus |
Primary cell |
GEO |
GSE42538 |
GPL6244 |
23275455 |
txt
|
| siRNA |
GATA4 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
HUH6 |
Liver |
Cell line |
GEO |
GSE110788 |
GPL10558 |
- |
txt
|
| siRNA |
ZFP36L1 |
Homo sapiens |
zf-CCCH |
Zinc-Coordinating Group |
J82 |
Urinary_bladder |
Cell line |
GEO |
GSE136180 |
GPL23227 |
31551365 |
txt
|
| siRNA |
LEF1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
BL2 |
Lymph |
Cell line |
GEO |
GSE42637 |
GPL570 |
23375451 |
txt
|
| siRNA |
GATA4 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
AGS |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
GLI2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE42903 |
GPL6244 |
- |
txt
|
| siRNA |
GATA4 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
KatoIII |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
E2F1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HK1 |
Nasopharynx |
Cell line |
GEO |
GSE138752 |
GPL20795 |
- |
txt
|
| siRNA |
GATA4 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
YCC3 |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
HNRNPU |
Homo sapiens |
HNRNP |
TcoF-DB_TcoF |
RKO |
Colon |
Cell line |
GEO |
GSE141771 |
GPL16791 |
- |
txt
|
| siRNA |
REST |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
H295R/TR |
Adrenal_gland |
Cell line |
GEO |
GSE43033 |
GPL6244 |
23907384 |
txt
|
| siRNA |
GATA6 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
AGS |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
GLI1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
RMS13 |
Skeletal_muscle |
Cell line |
GEO |
GSE143681 |
GPL20301 |
32376693 |
txt
|
| siRNA |
SF1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
H295R/TR |
Adrenal_gland |
Cell line |
GEO |
GSE43033 |
GPL6244 |
23907384 |
txt
|
| siRNA |
GATA6 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
KatoIII |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
ZNF213 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE143948 |
GPL20301 |
33777799 |
txt
|
| siRNA |
EHF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Corneal epithelial cells |
Corneal_epithelial |
Primary cell |
GEO |
GSE43157 |
GPL6244 |
24142692 |
txt
|
| siRNA |
GATA6 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
YCC3 |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
GFP |
Homo sapiens |
UNKNOW |
UNKNOW |
BT-20 cells |
Mammary_gland |
Cell line |
GEO |
GSE2222 |
GPL96 |
15958562 |
txt
|
| siRNA |
ETS2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
H441 |
Lung |
Cell line |
GEO |
GSE43459 |
GPL6244 |
23659968 |
txt
|
| siRNA |
GFP |
Homo sapiens |
UNKNOW |
UNKNOW |
SCC25 |
Upper_aerodigestive_tract |
Cell line |
GEO |
GSE58074 |
GPL10558 |
26018753 25411162 |
txt
|
| siRNA |
GRHL3 |
Homo sapiens |
Grainyhead domain factors |
Immunoglobulin fold |
Primary neonatal keratinocytes |
Skin |
Primary cell |
GEO |
GSE37049 |
GPL6244 |
22829784 |
txt
|
| siRNA |
ZBTB7A |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
BGC823 |
Stomach |
Cell line |
GEO |
GSE147199 |
GPL20795 |
32965543 |
txt
|
| siRNA |
HDAC3 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
NFKB2 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE148511 |
GPL20301 |
35689636 |
txt
|
| siRNA |
HDAC5 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
DNMT1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Human melanoma cells |
Skin |
Cell line |
GEO |
GSE150557 |
GPL16791 |
32891059 |
txt
|
| siRNA |
LIN28B |
Homo sapiens |
Others |
beta-Scaffold Factors |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE44613 |
GPL570 |
23481595 |
txt
|
| siRNA |
HES6 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
A172 |
Brain |
Cell line |
GEO |
GSE22692 |
GPL6947 |
21785461 |
txt
|
| siRNA |
HES6 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
LN405 |
Brain |
Cell line |
GEO |
GSE22692 |
GPL6947 |
21785461 |
txt
|
| siRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
HIF3A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Hep3B |
Liver |
Cell line |
GEO |
GSE128846 |
GPL19109 |
31768607 |
txt
|
| siRNA |
HIF3A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Hep3B |
Liver |
Cell line |
GEO |
GSE128847 |
GPL19109 |
31768607 |
txt
|
| siRNA |
TRIM8 |
Homo sapiens |
Tripartite motif |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE157109 |
GPL24676 |
- |
txt
|
| siRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
Kasumi-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE45743 |
GPL6244 |
24055056 |
txt
|
| siRNA |
HINFP |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
hTERT-RPE1 |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
SKNBE2 |
Autonomic_ganglia |
Cell line |
GEO |
GSE45967 |
GPL13158 |
25925418 |
txt
|
| siRNA |
HINFP |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE69148 |
GPL20234 |
27929715 |
txt
|
| siRNA |
HMGA1 |
Homo sapiens |
A.T hook factors |
beta-Sheet binding to DNA |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE35525 |
GPL570 |
23945276 |
txt
|
| siRNA |
ELK1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HMGA2 |
Homo sapiens |
A.T hook factors |
beta-Sheet binding to DNA |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE118857 |
GPL6884 |
- |
txt
|
| siRNA |
GATA3 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HNF4a |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE28590 |
GPL570 |
21646355 |
txt
|
| siRNA |
ILF2 |
Homo sapiens |
Others |
Other Cofactors |
SGC-7901 |
Stomach |
Cell line |
GEO |
GSE161544 |
GPL20301 |
36457025 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HOXB7 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
MAF |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HOXC4 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Fibroblast |
Skin |
Primary cell |
GEO |
GSE44305 |
GPL10558 |
25013174 |
txt
|
| siRNA |
NFATC3 |
Homo sapiens |
Others |
beta-Scaffold Factors |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE51498 |
GPL6244 |
26438876 |
txt
|
| siRNA |
JAZF1 |
Homo sapiens |
zf-C2H2 |
Zinc-Coordinating Group |
HeLa Kyoto |
Cervix |
Cell line |
GEO |
GSE163214 |
GPL21697 |
33445503 |
txt
|
| siRNA |
NFKB1 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HSF2 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE46333 |
GPL14550 |
24401939 |
txt
|
| siRNA |
HTATIP |
Homo sapiens |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
HOXB7 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MIA PaCa-2 |
Pancreas |
Cell line |
GEO |
GSE46393 |
GPL10332 |
24088503 |
txt
|
| siRNA |
HTATIP2 |
Homo sapiens |
Others |
Other Cofactors |
LNCaP |
Prostate |
Cell line |
GEO |
GSE66722 |
GPL19874 |
- |
txt
|
| siRNA |
HOXB7 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
Capan-1 |
Pancreas |
Cell line |
GEO |
GSE46393 |
GPL10332 |
24088503 |
txt
|
| siRNA |
ID1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
FOSL1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
BT549 |
Mammary_gland |
Cell line |
GEO |
GSE46440 |
GPL11532 |
24830720 |
txt
|
| siRNA |
IRF4 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Cutaneous T cell lymphoma HuT-102 cells |
Skin |
Primary cell |
GEO |
GSE22036 |
GPL570 |
21498517 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
BT549 |
Mammary_gland |
Cell line |
GEO |
GSE46440 |
GPL11532 |
24830720 |
txt
|
| siRNA |
JARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
SKNBE2 |
Autonomic_ganglia |
Cell line |
GEO |
GSE45967 |
GPL13158 |
25925418 30388705 28684529 |
txt
|
| siRNA |
ESRRG |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
Trophoblast cells |
Placenta_tissue |
In vitro differentiated cell |
GEO |
GSE46463 |
GPL10558 |
23584901 |
txt
|
| siRNA |
JARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
NB1691 |
Brain |
Cell line |
GEO |
GSE49854 |
GPL13158 |
30388705 |
txt
|
| siRNA |
JARID2 |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
human adipose tissue derived stem cells |
Adipose_tissue |
Stem cell |
GEO |
GSE164413 |
GPL21697 |
33963396 |
txt
|
| siRNA |
NR4A1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
PANC1 |
Pancreas |
Cell line |
GEO |
GSE46994 |
GPL10558 |
24515801 |
txt
|
| siRNA |
JARID2 |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
CD34+ cells |
Cord_Blood |
Primary cell |
GEO |
GSE52921 |
GPL13667 |
25097177 |
txt
|
| siRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SAECs |
Lung |
Cell line |
GEO |
GSE47436 |
GPL570 |
24726368 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE122918 |
GPL17586 |
32514071 |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
TOV112D |
Ovary |
Cell line |
GEO |
GSE47438 |
GPL6947 |
23690307 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
WI38 |
Fibroblasts |
Cell line |
GEO |
GSE144397 |
GPL17586 |
32514071 |
txt
|
| siRNA |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
ES2 |
Ovary |
Cell line |
GEO |
GSE47438 |
GPL6947 |
23690307 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
Ma-Mel-15 |
Skin |
Cell line |
GEO |
GSE71886 |
GPL10558 |
26530832 |
txt
|
| siRNA |
JUND |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE118123 |
GPL570 |
- |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
OE21 |
Oesophagus |
Cell line |
GEO |
GSE47763 |
GPL10558 |
23912451 |
txt
|
| siRNA |
JUND |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE31912 |
GPL570 |
22536322 |
txt
|
| siRNA |
SIRT1 |
Homo sapiens |
Sirtuin |
Chromatin Remodeling Factors |
PANC1 |
Pancreas |
Cell line |
GEO |
GSE171118 |
GPL23227 |
34163012 |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
OE33 |
Oesophagus |
Cell line |
GEO |
GSE47763 |
GPL10558 |
23912451 |
txt
|
| siRNA |
KDM3A |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE124270 |
GPL10558 |
31390833 |
txt
|
| siRNA |
NR5A2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE47803 |
GPL6947 |
24049078 |
txt
|
| siRNA |
Klf4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Primary neonatal keratinocytes |
Skin |
Primary cell |
GEO |
GSE32685 |
GPL570 |
22364861 |
txt
|
| siRNA |
KLF5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SW480 |
Colon |
Cell line |
GEO |
GSE33824 |
GPL4133 |
23319804 |
txt
|
| siRNA |
E2F1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE172094 |
GPL24676 |
- |
txt
|
| siRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
Scaber |
Urothelial |
Cell line |
GEO |
GSE48124 |
GPL10558 |
24525232 |
txt
|
| siRNA |
KLF5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
AGS |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
E2F2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE172094 |
GPL24676 |
- |
txt
|
| siRNA |
TCF4 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
SH-SY5Y |
Autonomic_ganglia |
Cell line |
GEO |
GSE48367 |
GPL13915 |
24058414 |
txt
|
| siRNA |
KLF5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
KatoIII |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| siRNA |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE48672 |
GPL10558 |
26119944 |
txt
|
| siRNA |
KLF5 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
YCC3 |
Stomach |
Cell line |
GEO |
GSE51706 |
GPL570 |
25053715 |
txt
|
| shRNA |
DNMT3B |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
2102Ep |
Embryo |
Cell line |
GEO |
GSE172458 |
GPL24676 |
34482638 |
txt
|
| shRNA |
NFATC2 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
THP-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE173394 |
GPL24676 |
- |
txt
|
| shRNA |
FOXK2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
OVCAR-5 |
Ovary |
Cell line |
GEO |
GSE173779 |
GPL20301 |
35349489 |
txt
|
| shRNA |
GABPA |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
C4-2B |
Prostate |
Cell line |
GEO |
GSE49083 |
GPL10558 |
24753418 |
txt
|
| shRNA |
GABPA |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE49083 |
GPL10558 |
24753418 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
H3118 MEC |
Parotid_gland |
Cell line |
GEO |
GSE49673 |
GPL570 |
26503699 |
txt
|
| shRNA |
CCAR2 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR237IWZ |
- |
- |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
HSY |
Parotid_gland |
Cell line |
GEO |
GSE49673 |
GPL570 |
26503699 |
txt
|
| shRNA |
RBM15 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR599PXD |
- |
22955616 |
txt
|
| shRNA |
ILF2 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR366FFV |
- |
22955616 |
txt
|
| shRNA |
LHX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
ES-derived RPE cells |
Bone_marrow |
Cell line |
GEO |
GSE178163 |
GPL18573 |
- |
txt
|
| shRNA |
SRSF7 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR017PRS |
- |
22955616 |
txt
|
| shRNA |
MEF2D |
Homo sapiens |
MADS box factors |
alpha-Helices exposed by beta-structures |
HuH7 |
Liver |
Cell line |
GEO |
GSE37123 |
GPL6480 |
- |
txt
|
| shRNA |
IKZF2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Hut78 |
Lymph |
Cell line |
GEO |
GSE179433 |
GPL24676 |
- |
txt
|
| shRNA |
SRSF9 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR597XHH |
- |
22955616 |
txt
|
| shRNA |
HNRNPK |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR853ZJS |
- |
22955616 |
txt
|
| shRNA |
USP7 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
xenograft cells |
Skin |
Primary cell |
GEO |
GSE180986 |
GPL11154 |
36130505 |
txt
|
| shRNA |
RBM22 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR330KHN |
- |
- |
txt
|
| shRNA |
PLAG1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Lin-CD34+ HSPCs |
Cord_blood |
Primary cell |
GEO |
GSE181991 |
GPL11154 |
35639948 |
txt
|
| shRNA |
NONO |
Homo sapiens |
NonO domain factors |
Yet undefined DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR647NYX |
- |
22955616 |
txt
|
| shRNA |
ILF3 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR942MBU |
- |
22955616 |
txt
|
| shRNA |
XBP1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
T47D |
Mammary_gland |
Cell line |
GEO |
GSE49953 |
GPL570 |
24670641 |
txt
|
| shRNA |
AGO1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR533HXS |
- |
22955616 |
txt
|
| shRNA |
XBP1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE49953 |
GPL570 |
24670641 |
txt
|
| shRNA |
HNRNPL |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR155BMF |
- |
22955616 |
txt
|
| shRNA |
HIC1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HBL100 |
Mammary_gland |
Cell line |
GEO |
GSE50061 |
GPL17077 |
24295734 |
txt
|
| shRNA |
U2AF1 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR372UWV |
- |
22955616 |
txt
|
| shRNA |
SUFU |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HCC1954 cells |
Mammary_gland |
Cell line |
GEO |
GSE188806 |
GPL11154 |
35800779 |
txt
|
| shRNA |
YBX3 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR494VSD |
- |
- |
txt
|
| shRNA |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
COLO829 |
Skin |
Cell line |
GEO |
GSE50649 |
GPL6244 |
24443471 |
txt
|
| shRNA |
PSIP1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR744YVR |
- |
22955616 |
txt
|
| shRNA |
RBM17 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR385TMY |
- |
22955616 |
txt
|
| shRNA |
SETDB1 |
Homo sapiens |
Others |
ENCODE_TF |
HCT116 |
Colon |
Cell line |
GEO |
GSE192372 |
GPL24676 |
35671824 |
txt
|
| shRNA |
RBFOX2 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR767LLP |
- |
22955616 |
txt
|
| shRNA |
DAXX |
Homo sapiens |
Other_CRF |
Chromatin Remodeling Factors |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE192420 |
GPL20301 |
- |
txt
|
| shRNA |
SAFB2 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR110ZYD |
- |
22955616 |
txt
|
| shRNA |
FIP1L1 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR116QBU |
- |
22955616 |
txt
|
| shRNA |
EGR3 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
M12 |
Prostate |
Cell line |
GEO |
GSE52108 |
GPL570 |
23342084 |
txt
|
| shRNA |
HDGF |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR634KHL |
- |
22955616 |
txt
|
| shRNA |
SOX11 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
MCL |
Lymph |
Cell line |
GEO |
GSE52892 |
GPL570 |
25092176 |
txt
|
| shRNA |
U2AF2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR426UUG |
- |
22955616 |
txt
|
| shRNA |
BCLAF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
RKO |
Colon |
Cell line |
GEO |
GSE52990 |
GPL570 |
25091051 |
txt
|
| shRNA |
TAF15 |
Homo sapiens |
Others |
ENCODE_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR998RZI |
- |
22955616 |
txt
|
| shRNA |
SSB |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR278CHI |
- |
- |
txt
|
| shRNA |
ZNF622 |
Homo sapiens |
Others |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR518JXY |
- |
- |
txt
|
| shRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HEL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE54075 |
GPL13497 |
24874575 |
txt
|
| shRNA |
HNRNPUL1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR689ZJC |
- |
22955616 |
txt
|
| shRNA |
PTEN |
Homo sapiens |
Others |
TcoF-DB_TcoF |
MCF10A |
Mammary_gland |
Cell line |
GEO |
GSE54265 |
GPL6884 |
24553445 |
txt
|
| shRNA |
GTF2F1 |
Homo sapiens |
Others |
ENCODE_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR295XKC |
- |
- |
txt
|
| shRNA |
ATM |
Homo sapiens |
Others |
ENCODE_TF |
MCF10A |
Mammary_gland |
Cell line |
GEO |
GSE54268 |
GPL10558 |
24553445 |
txt
|
| shRNA |
RBM39 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR760EGM |
- |
22955616 |
txt
|
| shRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE54360 |
GPL6244 |
25489981 |
txt
|
| shRNA |
BCLAF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR481AYC |
- |
22955616 |
txt
|
| shRNA |
SMARCA2 |
Homo sapiens |
SWI/SNF |
Chromatin Remodeling Factors |
HCC2302 |
Lung |
Cell line |
GEO |
GSE205542 |
GPL16791 |
36357397 |
txt
|
| shRNA |
KLF3 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE54437 |
GPL10558 |
- |
txt
|
| shRNA |
U2AF2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR622MCX |
- |
22955616 |
txt
|
| shRNA |
XRCC5 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR732IYM |
- |
22955616 |
txt
|
| shRNA |
PCBP1 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR635FRH |
- |
22955616 |
txt
|
| shRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
MMNK1 |
Bile_duct |
Cell line |
GEO |
GSE207892 |
GPL18573 |
36044839 |
txt
|
| shRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HuH7 |
Liver |
Cell line |
GEO |
GSE55212 |
GPL14951 |
25892225 |
txt
|
| shRNA |
TARDBP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR527QNC |
- |
22955616 |
txt
|
| shRNA |
SNAI2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Primary human keratinocytes |
Skin |
Primary cell |
GEO |
GSE55269 |
GPL570 |
25793155 |
txt
|
| shRNA |
SUB1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR997FOT |
- |
22955616 |
txt
|
| shRNA |
IRF2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD34+ cells |
Cord_Blood |
Primary cell |
GEO |
GSE212023 |
GPL18573 |
36544762 |
txt
|
| shRNA |
KLF2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
RPMI8226 |
Bone_marrow |
Cell line |
GEO |
GSE55667 |
GPL570 |
26728187 |
txt
|
| shRNA |
CEBPZ |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR929PXS |
- |
22955616 |
txt
|
| shRNA |
TXNIP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
CD34+ cells |
Cord_Blood |
Primary cell |
GEO |
GSE212024 |
GPL18573 |
36232644 |
txt
|
| shRNA |
IRX1 |
Homo sapiens |
Others |
Helix-turn-helix domains |
143B |
Bone_marrow |
Cell line |
GEO |
GSE55958 |
GPL15491 |
25822025 |
txt
|
| shRNA |
RBM25 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR610AEI |
- |
22955616 |
txt
|
| shRNA |
TXNIP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
ST3 |
Cord_blood |
Cell line |
GEO |
GSE212024 |
GPL18573 |
36232644 |
txt
|
| shRNA |
PTBP1 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR064DXG |
- |
22955616 |
txt
|
| shRNA |
RBM34 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR318HAT |
- |
22955616 |
txt
|
| shRNA |
JUN |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
LP6 |
Soft_tissue |
Cell line |
GEO |
GSE57529 |
GPL5175 |
24852265 |
txt
|
| shRNA |
EWSR1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR532ZPP |
- |
22955616 |
txt
|
| shRNA |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
HepG2 |
Liver |
Cell line |
GEO |
GSE220283 |
GPL24676 |
- |
txt
|
| shRNA |
PCBP2 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR028ITN |
- |
22955616 |
txt
|
| shRNA |
FUS |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR927JXU |
- |
22955616 |
txt
|
| shRNA |
HNRNPLL |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR490DYI |
- |
22955616 |
txt
|
| shRNA |
SMARCA1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE220741 |
GPL24676 |
- |
txt
|
| shRNA |
SNRNP70 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR635BOO |
- |
22955616 |
txt
|
| shRNA |
SRSF3 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR376FGR |
- |
22955616 |
txt
|
| shRNA |
PRPF4 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR215FRI |
- |
- |
txt
|
| shRNA |
MYC |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HT1080 |
Soft_tissue |
Cell line |
GEO |
GSE60558 |
GPL16686 |
25793315 |
txt
|
| shRNA |
TARDBP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR455TNF |
- |
22955616 |
txt
|
| shRNA |
POLR2G |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR936TED |
- |
22955616 |
txt
|
| shRNA |
STAT5 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE61312 |
GPL6244 |
- |
txt
|
| shRNA |
PTBP1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR527IVX |
- |
22955616 |
txt
|
| shRNA |
ARNT |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
hESC HSF1 |
Embryo |
Stem cell |
GEO |
GSE61842 |
GPL570 |
25418722 |
txt
|
| shRNA |
AGO2 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR495YSS |
- |
22955616 |
txt
|
| shRNA |
SRSF7 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR464ADT |
- |
22955616 |
txt
|
| shRNA |
SRSF9 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR113HRG |
- |
22955616 |
txt
|
| shRNA |
PCBP2 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR648QFY |
- |
22955616 |
txt
|
| shRNA |
HNRNPK |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR529JNJ |
- |
22955616 |
txt
|
| shRNA |
PCBP1 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR545AIK |
- |
22955616 |
txt
|
| shRNA |
PHB |
Homo sapiens |
Others |
TcoF-DB_TF |
Embryonic stem cells (ESCs) |
Embryo |
Stem cell |
GEO |
GSE71765 |
GPL570 |
- |
txt
|
| shRNA |
RBM17 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR898OPN |
- |
22955616 |
txt
|
| shRNA |
RBFOX2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR336DFS |
- |
22955616 |
txt
|
| shRNA |
TAF15 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR031RZS |
- |
22955616 |
txt
|
| shRNA |
RBM34 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR560AYQ |
- |
22955616 |
txt
|
| shRNA |
BCLAF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR410ZPU |
- |
22955616 |
txt
|
| shRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HSPCs |
Bone_marrow |
Primary cell |
GEO |
GSE62634 |
GPL6244 |
- |
txt
|
| shRNA |
RBM15 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR385UPQ |
- |
22955616 |
txt
|
| shRNA |
FUBP1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR608IXR |
- |
22955616 |
txt
|
| shRNA |
TWIST1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CAF14 |
Stomach |
Tissue |
GEO |
GSE62738 |
GPL13607 |
25368021 |
txt
|
| shRNA |
PTBP1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR239BCO |
- |
22955616 |
txt
|
| shRNA |
TWIST1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CAF32 |
Stomach |
Tissue |
GEO |
GSE62738 |
GPL13607 |
25368021 |
txt
|
| shRNA |
DROSHA |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR624XHG |
- |
22955616 |
txt
|
| shRNA |
MARK2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR016OIX |
- |
22955616 |
txt
|
| shRNA |
TWIST1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CAF |
Stomach |
Tissue |
GEO |
GSE62740 |
GPL13607 |
25368021 |
txt
|
| shRNA |
CCAR2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR984CLJ |
- |
22955616 |
txt
|
| shRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MDA |
Mammary_gland |
Cell line |
GEO |
GSE63562 |
GPL10558 |
25957686 |
txt
|
| shRNA |
FIP1L1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR511BNY |
- |
22955616 |
txt
|
| shRNA |
NKRF |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR231PWH |
- |
22955616 |
txt
|
| shRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MDA-LM2 |
Mammary_gland |
Cell line |
GEO |
GSE63562 |
GPL10558 |
25957686 |
txt
|
| shRNA |
ILF3 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR269HQA |
- |
22955616 |
txt
|
| shRNA |
NUP35 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR953IQF |
- |
22955616 |
txt
|
| shRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MDA |
Mammary_gland |
Cell line |
GEO |
GSE63563 |
GPL10558 |
25957686 |
txt
|
| shRNA |
NONO |
Homo sapiens |
NonO domain factors |
Yet undefined DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR398HXV |
- |
22955616 |
txt
|
| shRNA |
RELB |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE62815 |
GPL6244 |
- |
txt
|
| shRNA |
HNF1A |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
HuH7 |
Liver |
Cell line |
GEO |
GSE103128 |
GPL18180 |
29466992 |
txt
|
| shRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MDA |
Mammary_gland |
Cell line |
GEO |
GSE63564 |
GPL10558 |
25957686 |
txt
|
| shRNA |
SAFB2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR770LYW |
- |
22955616 |
txt
|
| shRNA |
MLXIP |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HA1ER |
Embryo_kidney |
Stem cell |
GEO |
GSE11242 |
GPL4133 |
18458340 |
txt
|
| shRNA |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
MDA |
Mammary_gland |
Cell line |
GEO |
GSE63565 |
GPL10558 |
25957686 |
txt
|
| shRNA |
RBM39 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR678WOA |
- |
22955616 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE12056 |
GPL570 |
18801183 |
txt
|
| shRNA |
SOX4 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE63957 |
GPL10904 |
- |
txt
|
| shRNA |
ILF2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR126ARZ |
- |
22955616 |
txt
|
| shRNA |
SATB1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
CD4+ T cells |
Peripheral_blood |
Primary cell |
GEO |
GSE17241 |
GPL2507 |
20522714 |
txt
|
| shRNA |
YBX3 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR306EIU |
- |
22955616 |
txt
|
| shRNA |
IRF4 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
BL2 |
Lymph |
Cell line |
GEO |
GSE64269 |
GPL18405 |
- |
txt
|
| shRNA |
SRSF4 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR697GLD |
- |
22955616 |
txt
|
| shRNA |
TLX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
ALLSIL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE65496 |
GPL570 |
27354269 |
txt
|
| shRNA |
FUS |
Homo sapiens |
Others |
ENCODE_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR325OOM |
- |
22955616 |
txt
|
| shRNA |
MYT1L |
Homo sapiens |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
SPC04 |
Fetal_spinal_cord |
Cell line |
GEO |
GSE65857 |
GPL10558 |
28470180 |
txt
|
| shRNA |
HNRNPUL1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR034VBA |
- |
22955616 |
txt
|
| shRNA |
MEF2A |
Homo sapiens |
MADS box factors |
alpha-Helices exposed by beta-structures |
SPC04 |
Fetal_spinal_cord |
Cell line |
GEO |
GSE65857 |
GPL10558 |
28470180 |
txt
|
| shRNA |
GTF2F1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR188IPO |
- |
22955616 |
txt
|
| shRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
iPS cells |
Dermal_fibroblasts |
Induced pluripotent stem cell |
GEO |
GSE13334 |
GPL4133 |
19668191 |
txt
|
| shRNA |
HES1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CUTLL1 |
Haematopoietic_and_lymphoid_tissue_Blood |
Cell line |
GEO |
GSE65872 |
GPL10558 |
25784680 |
txt
|
| shRNA |
PSIP1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR611LQB |
- |
22955616 |
txt
|
| shRNA |
XRCC5 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR715XZS |
- |
22955616 |
txt
|
| shRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
WE68 |
Bone_marrow |
Cell line |
GEO |
GSE14543 |
GPL96 |
19404404 |
txt
|
| shRNA |
HNRNPL |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR563YIS |
- |
22955616 |
txt
|
| shRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
SK-N-MC |
Neuroepithelium |
Cell line |
GEO |
GSE14543 |
GPL96 |
19404404 |
txt
|
| shRNA |
SUB1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR047AJA |
- |
22955616 |
txt
|
| shRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
TC252 |
Bone_marrow |
Cell line |
GEO |
GSE14543 |
GPL96 |
19404404 |
txt
|
| shRNA |
AGO1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR268JDD |
- |
22955616 |
txt
|
| shRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
STA-ET-1 |
Bone_marrow |
Cell line |
GEO |
GSE14543 |
GPL96 |
19404404 |
txt
|
| shRNA |
TAF15 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR611ZAL |
- |
22955616 |
txt
|
| shRNA |
FUBP1 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR736TAW |
- |
22955616 |
txt
|
| shRNA |
FLI1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
STA-ET-7.2 |
Bone_marrow |
Cell line |
GEO |
GSE14543 |
GPL96 |
19404404 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE68413 |
GPL10558 |
26008971 |
txt
|
| shRNA |
SSB |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR891AXF |
- |
22955616 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
Molt4 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE68413 |
GPL10558 |
26008971 |
txt
|
| shRNA |
U2AF1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR342EDG |
- |
22955616 |
txt
|
| shRNA |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE14964 |
GPL570 |
20215434 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
Nalm6 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE68413 |
GPL10558 |
26008971 |
txt
|
| shRNA |
RBM25 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR149DMY |
- |
22955616 |
txt
|
| shRNA |
YY2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HeLa |
Cervix |
Cell line |
GEO |
GSE14964 |
GPL570 |
20215434 |
txt
|
| shRNA |
CREB1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
RS4;11 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE68413 |
GPL10558 |
26008971 |
txt
|
| shRNA |
EWSR1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR831YGP |
- |
22955616 |
txt
|
| shRNA |
CPEB1 |
Homo sapiens |
Others |
Unclassified Structure |
HeLa |
Cervix |
Cell line |
GEO |
GSE15549 |
GPL4133 |
20364142 |
txt
|
| shRNA |
PTEN |
Homo sapiens |
Others |
TcoF-DB_TcoF |
A549 |
Lung |
Cell line |
GEO |
GSE68869 |
GPL10558 |
25995385 |
txt
|
| shRNA |
RBM22 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR947OIM |
- |
22955616 |
txt
|
| shRNA |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
SCC61 |
Upper_aerodigestive_tract |
Cell line |
GEO |
GSE15845 |
GPL6244 |
19891767 |
txt
|
| shRNA |
SALL4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
H661 |
Lung |
Cell line |
GEO |
GSE68959 |
GPL6244 |
27705911 |
txt
|
| shRNA |
TARDBP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR134JRE |
- |
22955616 |
txt
|
| shRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
CWR22Pc |
Prostate |
Cell line |
GEO |
GSE68993 |
GPL16686 |
- |
txt
|
| shRNA |
U2AF2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR904CJQ |
- |
22955616 |
txt
|
| shRNA |
STAT5 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
CWR22Pc |
Prostate |
Cell line |
GEO |
GSE68993 |
GPL16686 |
- |
txt
|
| shRNA |
RBM15 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR627NVU |
- |
22955616 |
txt
|
| shRNA |
WRN |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR093FHC |
- |
22955616 |
txt
|
| shRNA |
ESRRA |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
293T |
Embryo_kidney |
Cell line |
GEO |
GSE69661 |
GPL17077 |
- |
txt
|
| shRNA |
ZC3H8 |
Homo sapiens |
C3H zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR184YDW |
- |
22955616 |
txt
|
| shRNA |
ERG |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
VCaP |
Prostate |
Cell line |
GEO |
GSE16671 |
GPL6883 |
20713528 |
txt
|
| shRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
JVM2 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE70479 |
GPL10558 |
- |
txt
|
| shRNA |
NFYA |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
HCT1163 |
Colon |
Cell line |
GEO |
GSE70543 |
GPL17889 |
- |
txt
|
| shRNA |
NFYA |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
H322 |
Lung |
Cell line |
GEO |
GSE70543 |
GPL17889 |
- |
txt
|
| shRNA |
GRHL2 |
Homo sapiens |
Grainyhead domain factors |
Immunoglobulin fold |
OVCA429 |
Ovary |
Cell line |
GEO |
GSE71017 |
GPL16686 |
26887977 |
txt
|
| shRNA |
ETV1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
GIST882 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE19396 |
GPL6947 |
20927104 |
txt
|
| shRNA |
ETV1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
GIST48 |
Gastrointestinal_tissue |
Cell line |
GEO |
GSE19396 |
GPL6947 |
20927104 |
txt
|
| shRNA |
CNOT7 |
Homo sapiens |
CCR4-NOT |
Chromatin Remodeling Factors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR274KWA |
- |
22955616 |
txt
|
| shRNA |
POSTN |
Homo sapiens |
Uncharacterized |
Yet undefined DNA-binding domains |
GSC272 |
Brain |
Cell line |
GEO |
GSE73071 |
GPL570 |
27307601 |
txt
|
| shRNA |
ABT1 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR756VLW |
- |
22955616 |
txt
|
| shRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
BJ |
Skin |
Cell line |
GEO |
GSE20076 |
GPL6884 |
20228809 |
txt
|
| shRNA |
CALR |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR040WAK |
- |
22955616 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
MCF10A |
Mammary_gland |
Cell line |
GEO |
GSE20286 |
GPL571 |
16715076/20194747 |
txt
|
| shRNA |
CCAR1 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR081IAO |
- |
22955616 |
txt
|
| shRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE20544 |
GPL6244 |
26944678 |
txt
|
| shRNA |
UBE2L3 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR424JSU |
- |
22955616 |
txt
|
| shRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CD34+ |
Peripheral_blood |
Primary cell |
GEO |
GSE20545 |
GPL6244 |
21179004 |
txt
|
| shRNA |
PRPF6 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR529QEZ |
- |
22955616 |
txt
|
| shRNA |
POU5F1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE21135 |
GPL6947 |
20526341 |
txt
|
| shRNA |
ARID1B |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
IRM90 |
Liver |
Cell line |
GEO |
GSE75207 |
GPL6244 |
27737960 |
txt
|
| shRNA |
DDX1 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR070LJO |
- |
22955616 |
txt
|
| shRNA |
CBFB |
Homo sapiens |
Others |
beta-Scaffold Factors |
PPC1 |
Prostate |
Cell line |
GEO |
GSE21561 |
GPL6480 |
20607802 |
txt
|
| shRNA |
NPM1 |
Homo sapiens |
Nucleoplasmin |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR016XPB |
- |
22955616 |
txt
|
| shRNA |
HDGF |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR793QPX |
- |
22955616 |
txt
|
| shRNA |
PRDM14 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE22795 |
GPL6947 |
20953172 |
txt
|
| shRNA |
PTEN |
Homo sapiens |
Others |
TcoF-DB_TcoF |
A431 |
Skin |
Cell line |
GEO |
GSE7562 |
GPL570 |
17560336 |
txt
|
| shRNA |
ABT1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR233UVM |
- |
22955616 |
txt
|
| shRNA |
PTEN |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HCC827 |
Lung |
Cell line |
GEO |
GSE7562 |
GPL570 |
17560336 |
txt
|
| shRNA |
CNOT7 |
Homo sapiens |
CCR4-NOT |
Chromatin Remodeling Factors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR113PYX |
- |
22955616 |
txt
|
| shRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE24778 |
GPL5188 |
20959602 |
txt
|
| shRNA |
PTEN |
Homo sapiens |
Others |
TcoF-DB_TcoF |
SKBR3 |
Mammary_gland |
Cell line |
GEO |
GSE7562 |
GPL570 |
17560336 |
txt
|
| shRNA |
UBE2L3 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR362XMY |
- |
22955616 |
txt
|
| shRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD34-derived erythroid progenitors |
Peripheral_blood |
Primary cell |
GEO |
GSE25678 |
GPL8019 |
21205891 |
txt
|
| shRNA |
DDX1 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR208GPE |
- |
22955616 |
txt
|
| shRNA |
HOXA5 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MCF10A |
Mammary_gland |
Cell line |
GEO |
GSE75840 |
GPL10558 |
- |
txt
|
| shRNA |
CCAR1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR386YEV |
- |
22955616 |
txt
|
| shRNA |
NR2E1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
PBT003 |
Neuroepithelium |
Primary cell |
GEO |
GSE75945 |
GPL15207 |
26838672 |
txt
|
| shRNA |
PRPF6 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR783LUA |
- |
22955616 |
txt
|
| shRNA |
ARNT |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
WA09/H9 |
Embryo |
Stem cell |
GEO |
GSE76090 |
GPL10558 |
- |
txt
|
| shRNA |
NR5A1 |
Homo sapiens |
Others |
TcoF-DB_TF |
NCI-H295R |
Adrenal_gland |
Cell line |
GEO |
GSE26529 |
GPL6244 |
21239516 |
txt
|
| shRNA |
ZEB2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE27966 |
GPL570 |
- |
txt
|
| shRNA |
ZHX2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
786-O |
Kidney |
Cell line |
GEO |
GSE110094 |
GPL16686 |
30026228 |
txt
|
| shRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
H9 |
Embryo |
Stem cell |
GEO |
GSE79598 |
GPL17586 |
27720906 |
txt
|
| shRNA |
ARNT |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CTB |
Placenta_tissue |
Primary cell |
GEO |
GSE80995 |
GPL10558 |
28167044 |
txt
|
| shRNA |
ELK3 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE83325 |
GPL15207 |
- |
txt
|
| shRNA |
HNF4G |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
22RV1 |
Prostate |
Cell line |
GEO |
GSE85242 |
GPL10558 |
- |
txt
|
| shRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
RS4;11 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE86066 |
GPL6244 |
- |
txt
|
| shRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
018Z |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE86066 |
GPL6244 |
- |
txt
|
| shRNA |
AR |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
CWR22Rv1 |
Prostate |
Cell line |
GEO |
GSE86547 |
GPL16686 |
28416760 |
txt
|
| shRNA |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
Mesenchymal stem cells |
Bone_marrow |
In vitro differentiated cell |
GEO |
GSE28546 |
GPL6883 |
- |
txt
|
| shRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
SW480 |
Colon |
Cell line |
GEO |
GSE118593 |
GPL15207 |
31130994 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HaCaT |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE88832 |
GPL6244 |
28041841 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
JHU-029 |
Head_and_neck |
Cell line |
GEO |
GSE88833 |
GPL6244 |
28041841 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
FaDU |
Head_and_neck |
Cell line |
GEO |
GSE88833 |
GPL6244 |
28041841 |
txt
|
| shRNA |
PAX2 |
Homo sapiens |
Paired box factors |
Helix-turn-helix domains |
TOV21G |
Ovary |
Cell line |
GEO |
GSE30501 |
GPL570 |
23502471 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
HaCaT |
Immortalized_keratinocyte |
Cell line |
GEO |
GSE88861 |
GPL6244 |
28041841 |
txt
|
| shRNA |
ZNF148 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
CD34-derived erythroid progenitors |
Peripheral_blood |
Primary cell |
GEO |
GSE31092 |
GPL571 |
21828133 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
JHU-029 |
Head_and_neck |
Cell line |
GEO |
GSE88861 |
GPL6244 |
28041841 |
txt
|
| shRNA |
NSD2 |
Homo sapiens |
HMG |
Other Alpha-Helix Group |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE144939 |
GPL10558 |
32826945 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
FaDU |
Head_and_neck |
Cell line |
GEO |
GSE88861 |
GPL6244 |
28041841 |
txt
|
| shRNA |
TOX |
Homo sapiens |
Others |
Other all-alpha-helical DNA-binding domains |
CCRF-CEM |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE89607 |
GPL16686 |
- |
txt
|
| shRNA |
TOX |
Homo sapiens |
Others |
Other all-alpha-helical DNA-binding domains |
HPB-ALL |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE89607 |
GPL16686 |
- |
txt
|
| shRNA |
SNAI2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
pancreatic cancer stem cells |
Pancreas |
Cell line |
GEO |
GSE155107 |
GPL20844 |
34628696 |
txt
|
| shRNA |
SNAI2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
KLM1 |
Pancreas |
Cell line |
GEO |
GSE155108 |
GPL20844 |
34628696 |
txt
|
| shRNA |
DNMT1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
hTERT-immortalised adult fibroblasts |
Lung |
Cell line |
GEO |
GSE90011 |
GPL10558 |
29598829 |
txt
|
| shRNA |
SMARCB1 |
Homo sapiens |
Others |
TcoF-DB_TF |
SK-Hep1 |
Liver |
Cell line |
GEO |
GSE107208 |
GPL10558 |
- |
txt
|
| shRNA |
ZNF830 |
Homo sapiens |
Others |
TcoF-DB_TF |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE117390 |
GPL17585 |
- |
txt
|
| shRNA |
KDM5A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
NCH644 |
Brain |
Cell line |
GEO |
GSE117962 |
GPL570 |
- |
txt
|
| shRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
MV4-11 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE94835 |
GPL17692 |
- |
txt
|
| shRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
MV4-11 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE98748 |
GPL17692 |
- |
txt
|
| shRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
iEEC16 |
Uterus |
Cell line |
GEO |
GSE86572 |
GPL10558 |
- |
txt
|
| shRNA |
TCF7L1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE92446 |
GPL10558 |
28450117 |
txt
|
| shRNA |
MLXIP |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
Nalm6 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE33967 |
GPL6244 |
22748921 |
txt
|
| shRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HF2303 |
Neuroepithelium |
Primary cell |
GEO |
GSE51441 |
GPL10558 |
24726753 |
txt
|
| shRNA |
NANOG |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE34904 |
GPL10558 |
22482508 |
txt
|
| shRNA |
POU5F1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE34904 |
GPL10558 |
22482508 |
txt
|
| shRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE34904 |
GPL10558 |
22482508 |
txt
|
| shRNA |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
H1-hESC |
Embryo |
Stem cell |
GEO |
GSE34918 |
GPL10558 |
22482508 |
txt
|
| shRNA |
CTCF |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Immortalized prostate epithelial cells |
Prostate |
Cell line |
GEO |
GSE93363 |
GPL17586 |
- |
txt
|
| shRNA |
SALL4 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
SNU398 |
Liver |
Cell line |
GEO |
GSE35965 |
GPL6244 |
- |
txt
|
| shRNA |
IRF2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) |
Fetal_liver |
Primary cell |
GEO |
GSE36988 |
GPL15394 |
23041383 |
txt
|
| shRNA |
ETV4 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE21209 |
GPL4133 |
21373373 |
txt
|
| shRNA |
IRF6 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) |
Fetal_liver |
Primary cell |
GEO |
GSE36988 |
GPL15394 |
23041383 |
txt
|
| shRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE68050 |
GPL10558 |
26581166 |
txt
|
| shRNA |
MYB |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
Primary CD34+ hematopoietic stem/progenitor cells (HSPCs) |
Fetal_liver |
Primary cell |
GEO |
GSE36988 |
GPL15394 |
23041383 |
txt
|
| shRNA |
HNF1B |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
RMG2 |
Ovary |
Cell line |
GEO |
GSE37290 |
GPL570 |
- |
txt
|
| shRNA |
PAX3 |
Homo sapiens |
Paired box factors |
Helix-turn-helix domains |
Rh30 |
Soft_tissue |
Cell line |
GEO |
GSE35862 |
GPL6480 |
22533991 |
txt
|
| shRNA |
FOXA1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
22RV1 |
Prostate |
Cell line |
GEO |
GSE37314 |
GPL10558 |
23539448 |
txt
|
| shRNA |
RUNX2 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE46477 |
GPL4133 |
24124450 |
txt
|
| shRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
EWS-FLI1 |
Bone |
Cell line |
GEO |
GSE37409 |
GPL570 |
23995784 |
txt
|
| shRNA |
SPDEF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE37662 |
GPL96 |
23592399 |
txt
|
| shRNA |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
pathogenic Th17 cells |
Peripheral_blood |
Cell line |
GEO |
GSE184979 |
GPL15207 |
34806650 |
txt
|
| shRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
OSE4 |
Ovary |
Cell line |
GEO |
GSE37684 |
GPL10558 |
21900401 |
txt
|
| shRNA |
GRHL2 |
Homo sapiens |
Grainyhead domain factors |
Immunoglobulin fold |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE90132 |
GPL4133 |
28278050 |
txt
|
| shRNA |
ARID1A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
IOSE80pc |
Ovary |
Cell line |
GEO |
GSE37684 |
GPL10558 |
21900401 |
txt
|
| shRNA |
CNOT3 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
A549 |
Lung |
Cell line |
GEO |
GSE114694 |
GPL570 |
- |
txt
|
| shRNA |
PRMT1 |
Homo sapiens |
Arginine methyltransferase |
Histone-modifying Enzymes |
A549 |
Lung |
Cell line |
GEO |
GSE162840 |
GPL15207 |
34619150 |
txt
|
| shRNA |
ESRRA |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE38690 |
GPL10739 |
23720198 |
txt
|
| shRNA |
TCF3 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
MDA-MB468 |
Mammary_gland |
Cell line |
GEO |
GSE38893 |
GPL6244 |
23090119 |
txt
|
| shRNA |
BRD4 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE39580 |
GPL6480 |
22897906 |
txt
|
| shRNA |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
LM2 |
Mammary_gland |
Cell line |
GEO |
GSE104910 |
GPL18573 |
29669287 |
txt
|
| shRNA |
RUNX1 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
OCI-AML5 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE119261 |
GPL9115 |
31023702 |
txt
|
| shRNA |
NFYA |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
HeLaS3 |
Cervix |
Cell line |
GEO |
GSE40215 |
GPL570 |
23595228 |
txt
|
| shRNA |
ARID2 |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
MM.1S |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE126463 |
GPL24676 |
32958952 |
txt
|
| shRNA |
ID1 |
Homo sapiens |
Others |
Basic domains |
GSC2 |
Neuroepithelium |
Stem cell |
GEO |
GSE40614 |
GPL6883 |
27477274 |
txt
|
| shRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
BL41 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE109911 |
GPL6244 |
31557894 |
txt
|
| shRNA |
ID1 |
Homo sapiens |
Others |
Basic domains |
GSC8 |
Neuroepithelium |
Stem cell |
GEO |
GSE40614 |
GPL6883 |
27477274 |
txt
|
| shRNA |
FOXO1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Namalwa |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE109911 |
GPL6244 |
31557894 |
txt
|
| shRNA |
EP300 |
Homo sapiens |
Others |
ENCODE_TF |
MCF10AT |
Mammary_gland |
Cell line |
GEO |
GSE131231 |
GPL11154 |
- |
txt
|
| shRNA |
SPDEF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE40985 |
GPL570 |
23764000 |
txt
|
| shRNA |
ZNF148 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE132953 |
GPL11154 |
36207293 |
txt
|
| shRNA |
IKZF2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE41796 |
GPL10332 |
23600753 |
txt
|
| shRNA |
ABL1 |
Homo sapiens |
Others |
Other Cofactors |
HuH7 |
Liver |
Cell line |
GEO |
GSE133294 |
GPL11154 |
- |
txt
|
| shRNA |
IKZF1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE41796 |
GPL10332 |
23600753 |
txt
|
| shRNA |
USP22 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
PLC_PRF_5 cells |
Liver |
Cell line |
GEO |
GSE133858 |
GPL21290 |
31776228 |
txt
|
| shRNA |
SOX4 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
ACC3 |
Parotid_gland |
Cell line |
GEO |
GSE4225 |
GPL96 |
16636670 |
txt
|
| shRNA |
TPR |
Homo sapiens |
Others |
TcoF-DB_TcoF |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE135537 |
GPL18573 |
33091126 |
txt
|
| shRNA |
BHLHE40 |
Homo sapiens |
Others |
TcoF-DB_TF |
HeLaS3 |
Cervix |
Cell line |
GEO |
GSE137850 |
GPL20795 |
32885250 |
txt
|
| shRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
NOMO-1 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE43021 |
GPL6244 |
- |
txt
|
| shRNA |
SMARCA2 |
Homo sapiens |
SWI/SNF |
Chromatin Remodeling Factors |
NCI-H1944 |
Lung |
Cell line |
GEO |
GSE144843 |
GPL16791 |
33144586 |
txt
|
| shRNA |
MYBL2 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
CD34+ BM cells |
Bone_marrow |
Primary cell |
GEO |
GSE43400 |
GPL15401 |
23878725 |
txt
|
| shRNA |
DDX5 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
HGC-27 |
Stomach |
Cell line |
GEO |
GSE146429 |
GPL23227 |
34472665 |
txt
|
| shRNA |
TFAP2C |
Homo sapiens |
Basic helix-span-helix factors (bHSH) |
Basic domains |
MCF7 |
Mammary_gland |
Cell line |
GEO |
GSE44203 |
GPL14951 |
- |
txt
|
| shRNA |
TEAD4 |
Homo sapiens |
TEA domain factors |
Helix-turn-helix domains |
SNU216 |
Stomach |
Cell line |
GEO |
GSE44383 |
GPL10558 |
24325916 |
txt
|
| shRNA |
TAL1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
ECFCs |
Umbilical_cord_blood |
Primary cell |
GEO |
GSE44444 |
GPL6244 |
24792117 |
txt
|
| shRNA |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
JURKAT |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE44652 |
GPL570 |
23471820 |
txt
|
| shRNA |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GSC1517 |
Brain |
Cell line |
GEO |
GSE155836 |
GPL20301 |
- |
txt
|
| shRNA |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
A375 |
Skin |
Cell line |
GEO |
GSE44867 |
GPL570 |
23615731 |
txt
|
| shRNA |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GSC23 |
Brain |
Cell line |
GEO |
GSE155836 |
GPL20301 |
- |
txt
|
| shRNA |
HIF1A |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE44943 |
GPL6244 |
23649089 |
txt
|
| shRNA |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
GSC3028 |
Brain |
Cell line |
GEO |
GSE155836 |
GPL20301 |
- |
txt
|
| shRNA |
ZFX |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
DAOY |
Central_nervous_system |
Cell line |
GEO |
GSE45265 |
GPL6244 |
- |
txt
|
| shRNA |
HMGA1 |
Homo sapiens |
A.T hook factors |
beta-Sheet binding to DNA |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE45483 |
GPL5175 |
23658826 |
txt
|
| shRNA |
NFKBIA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE158743 |
GPL11154 |
33459422 |
txt
|
| shRNA |
ETV1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE46329 |
GPL6947 |
23817021 |
txt
|
| shRNA |
BMI1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
QBC-939 |
Bile_duct |
Cell line |
GEO |
GSE163175 |
GPL24676 |
- |
txt
|
| shRNA |
HMGA1 |
Homo sapiens |
A.T hook factors |
beta-Sheet binding to DNA |
HUCCT1 |
Bile_duct |
Cell line |
GEO |
GSE163759 |
GPL21290 |
34716319 |
txt
|
| shRNA |
EHF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
MKN7 |
Stomach |
Cell line |
GEO |
GSE164224 |
GPL18460 |
34014591 |
txt
|
| shRNA |
CDK7 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
D458 |
Bone_marrow |
Cell line |
GEO |
GSE164933 |
GPL24676 |
- |
txt
|
| shRNA |
CHD1 |
Homo sapiens |
Others |
ENCODE_TF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE168663 |
GPL11154 |
33846123 |
txt
|
| shRNA |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
KYN2 |
Liver |
Cell line |
GEO |
GSE47693 |
GPL6884 |
- |
txt
|
| shRNA |
MAP3K7 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
LNCaP |
Prostate |
Cell line |
GEO |
GSE168663 |
GPL11154 |
33846123 |
txt
|
| shRNA |
ETV1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
LNCaP |
Prostate |
Cell line |
GEO |
GSE47750 |
GPL10558 |
26731476 |
txt
|
| shRNA |
USP22 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
HuH7 |
Liver |
Cell line |
GEO |
GSE171225 |
GPL20301 |
34339800 |
txt
|
| shRNA |
E2F6 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
HuH7 |
Liver |
Cell line |
GEO |
GSE171319 |
GPL20301 |
34339800 |
txt
|
| shRNA |
TP63 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
UC14 |
Bladder |
Cell line |
GEO |
GSE48124 |
GPL10558 |
24525232 |
txt
|
| shRNA |
RUNX2 |
Homo sapiens |
Runt domain factors |
Immunoglobulin fold |
Natural Killer Cell |
Cord_blood |
Primary cell |
GEO |
GSE172435 |
GPL18573 |
35793229 |
txt
|
| knockout |
NFE2L1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
A549 |
Lung |
Cell line |
GEO |
GSE182461 |
GPL24676 |
35271393 |
txt
|
| knockout |
EP300 |
Homo sapiens |
Others |
ENCODE_TF |
HPAF-II orthotopic cells |
Pancreas |
Cell line |
GEO |
GSE183893 |
GPL21290 |
35536676 |
txt
|
| knockout |
CIC |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
Immortalized Astrocyte Cells |
Brain |
Cell line |
GEO |
GSE189859 |
GPL16791 |
34767259 |
txt
|
| knockout |
CAMTA1 |
Homo sapiens |
CG-1 |
TcoF-DB_TF |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE197081 |
GPL16791 |
36159397 |
txt
|
| knockout |
SOX9 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HuH7 |
Liver |
Cell line |
GEO |
GSE214335 |
GPL24676 |
- |
txt
|
| knockout |
PARP1 |
Homo sapiens |
Others |
TcoF-DB_TF |
HEK293a |
Embryo_kidney |
Cell line |
GEO |
GSE218871 |
GPL30209 |
36982223 |
txt
|
| knockout |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
Huh-7.5 |
Liver |
Cell line |
GEO |
GSE84693 |
GPL16686 |
27929099 |
txt
|
| knockout |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
MM1S |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE73665 |
GPL10558 |
- |
txt
|
| knockout |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
MOLP8 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE73665 |
GPL10558 |
- |
txt
|
| knockout |
ZNF598 |
Homo sapiens |
Others |
TcoF-DB_TF |
HeLa |
Cervix |
Cell line |
GEO |
GSE130370 |
GPL22439 |
- |
txt
|
| knockout |
ATF3 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE74362 |
GPL10558 |
27146783 |
txt
|
| knockout |
NFKBIZ |
Homo sapiens |
NFKB associated |
Co-activator/repressors |
Colon organoid |
Colon |
Organoid |
GEO |
GSE127757 |
GPL15207 |
31853059 |
txt
|
| knockout |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
SNU1 |
Stomach |
Cell line |
GEO |
GSE132327 |
GPL20795 |
- |
txt
|
| knockout |
DNMT3A |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE133960 |
GPL11154 |
31537639 |
txt
|
| knockout |
TFAP2A |
Homo sapiens |
Basic helix-span-helix factors (bHSH) |
Basic domains |
H9 |
Embryo |
Stem cell |
GEO |
GSE165713 |
GPL16791 |
35585237 |
txt
|
| knockout |
STRAP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
SK-N-AS |
Nerve |
Cell line |
GEO |
GSE169322 |
GPL18573 |
34206917 |
txt
|
| knockdown |
HMGB2 |
Homo sapiens |
HMG |
Other Alpha-Helix Group |
HUVEC |
Umbilical_vein |
Cell line |
GEO |
GSE98440 |
GPL20301 |
29706538 |
txt
|
| knockdown |
SOX9 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE143477 |
GPL15207 |
- |
txt
|
| knockdown |
ELF3 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HBDEC2 |
Bile_duct |
Cell line |
GEO |
GSE148106 |
GPL20844 |
- |
txt
|
| knockdown |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
Ishikawa (ISK) cell |
Uterus |
Cell line |
GEO |
GSE139246 |
GPL15207 |
34175897 |
txt
|
| knockdown |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
HCT116 |
Colon |
Cell line |
GEO |
GSE73294 |
GPL13497 |
- |
txt
|
| knockdown |
ETV5 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HT29 |
Colon |
Cell line |
GEO |
GSE112628 |
GPL11154 |
- |
txt
|
| knockdown |
YY1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
GEO |
GSE158884 |
GPL16791 |
34099540 |
txt
|
| esiRNA |
BACH1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE28050 |
GPL570 |
21555518 |
txt
|
| CRISPRko |
GRHL2 |
Homo sapiens |
Grainyhead domain factors |
Immunoglobulin fold |
A2780s |
Ovary |
Cell line |
GEO |
GSE90132 |
GPL4133 |
28278050 |
txt
|
| CRISPRi |
HMGN1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR011GAO |
- |
22955616 |
txt
|
| CRISPRi |
TARDBP |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR731XIE |
- |
22955616 |
txt
|
| CRISPRi |
MAF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR733ROU |
- |
22955616 |
txt
|
| CRISPRi |
ZBTB33 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR223QTD |
- |
22955616 |
txt
|
| CRISPRi |
MXD3 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR104JMN |
- |
22955616 |
txt
|
| CRISPRi |
NR4A1 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR357LVC |
- |
22955616 |
txt
|
| CRISPRi |
MITF |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR905SEH |
- |
- |
txt
|
| CRISPRi |
DPF2 |
Homo sapiens |
Others |
Chromatin Remodeling Factors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR028FBD |
- |
22955616 |
txt
|
| CRISPRi |
HOXB9 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR810RIC |
- |
22955616 |
txt
|
| CRISPRi |
JUND |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR389OCD |
- |
22955616 |
txt
|
| CRISPRi |
BACH1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR190RZZ |
- |
22955616 |
txt
|
| CRISPRi |
STAT2 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR469EFL |
- |
22955616 |
txt
|
| CRISPRi |
NR2F2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR688UTN |
- |
22955616 |
txt
|
| CRISPRi |
HMGN2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR243VNX |
- |
22955616 |
txt
|
| CRISPRi |
SRF |
Homo sapiens |
MADS box factors |
alpha-Helices exposed by beta-structures |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR084NTT |
- |
22955616 |
txt
|
| CRISPRi |
NFATC1 |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR381TNV |
- |
22955616 |
txt
|
| CRISPRi |
STAT1 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR184VVN |
- |
22955616 |
txt
|
| CRISPRi |
NFYB |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR171KMM |
- |
22955616 |
txt
|
| CRISPRi |
USF2 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR052BWT |
- |
22955616 |
txt
|
| CRISPRi |
USF1 |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR545HTM |
- |
22955616 |
txt
|
| CRISPRi |
ZNF384 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR103URL |
- |
22955616 |
txt
|
| CRISPRi |
GATA2 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR557BMX |
- |
22955616 |
txt
|
| CRISPRi |
KLF2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR620DOP |
- |
22955616 |
txt
|
| CRISPRi |
MEIS2 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR733TFF |
- |
22955616 |
txt
|
| CRISPRi |
FOXK2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR773VKE |
- |
22955616 |
txt
|
| CRISPRi |
NFE2L1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR385ZTW |
- |
22955616 |
txt
|
| CRISPRi |
TEAD2 |
Homo sapiens |
TEA domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR074FBG |
- |
22955616 |
txt
|
| CRISPRi |
ERF |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR268DNJ |
- |
22955616 |
txt
|
| CRISPRi |
LDB1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR046FQX |
- |
22955616 |
txt
|
| CRISPRi |
HINFP |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR713AEC |
- |
22955616 |
txt
|
| CRISPRi |
FOXM1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR701TVL |
- |
22955616 |
txt
|
| CRISPRi |
CITED2 |
Homo sapiens |
Others |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR200UDS |
- |
22955616 |
txt
|
| CRISPRi |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR052ZPX |
- |
22955616 |
txt
|
| CRISPRi |
TEAD4 |
Homo sapiens |
TEA domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR550FIL |
- |
22955616 |
txt
|
| CRISPRi |
CTBP1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR171RTN |
- |
22955616 |
txt
|
| CRISPRi |
SP2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR715EDZ |
- |
22955616 |
txt
|
| CRISPRi |
TBL1XR1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR800PWS |
- |
22955616 |
txt
|
| CRISPRi |
ZC3H11A |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR911BML |
- |
22955616 |
txt
|
| CRISPRi |
HMGN3 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR160YSN |
- |
22955616 |
txt
|
| CRISPRi |
THAP1 |
Homo sapiens |
C2CH THAP-type zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR294ZCD |
- |
22955616 |
txt
|
| CRISPRi |
SMARCA4 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR126GEQ |
- |
22955616 |
txt
|
| CRISPRi |
SMAD5 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR731FEO |
- |
22955616 |
txt
|
| CRISPRi |
SNW1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR409OFU |
- |
22955616 |
txt
|
| CRISPRi |
ARID3A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR898UNK |
- |
22955616 |
txt
|
| CRISPRi |
HDAC8 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR369BHC |
- |
22955616 |
txt
|
| CRISPRi |
SETDB1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR819PCU |
- |
22955616 |
txt
|
| CRISPRi |
TLE2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR399QAP |
- |
22955616 |
txt
|
| CRISPRi |
ATF3 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR123IMQ |
- |
22955616 |
txt
|
| CRISPRi |
DLX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR862UHT |
- |
22955616 |
txt
|
| CRISPRi |
UBTF |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR608ORR |
- |
22955616 |
txt
|
| CRISPRi |
STAT6 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR024HAR |
- |
22955616 |
txt
|
| CRISPRi |
HMBOX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR942XXL |
- |
22955616 |
txt
|
| CRISPRi |
ZNF143 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR781XJD |
- |
22955616 |
txt
|
| CRISPRi |
GATA1 |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR850LOZ |
- |
22955616 |
txt
|
| CRISPRi |
RFX5 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR619EYC |
- |
22955616 |
txt
|
| CRISPRi |
NRF1 |
Homo sapiens |
Basic leucine zipper factors (bZIP) |
Basic domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR299HUJ |
- |
22955616 |
txt
|
| CRISPRi |
TRIM28 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR591QYK |
- |
22955616 |
txt
|
| CRISPRi |
HOXB4 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR359VJC |
- |
- |
txt
|
| CRISPRi |
NONO |
Homo sapiens |
NonO domain factors |
Yet undefined DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR039VEQ |
- |
22955616 |
txt
|
| CRISPRi |
WHSC1 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR181WYS |
- |
22955616 |
txt
|
| CRISPRi |
SP1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR650QAK |
- |
22955616 |
txt
|
| CRISPRi |
RNF2 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR043UMW |
- |
22955616 |
txt
|
| CRISPRi |
ZNF395 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR267BHU |
- |
22955616 |
txt
|
| CRISPRi |
ILF2 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR073QLQ |
- |
22955616 |
txt
|
| CRISPRi |
TFDP1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR552HTC |
- |
22955616 |
txt
|
| CRISPRi |
STAT5A |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR376CFR |
- |
22955616 |
txt
|
| CRISPRi |
HSF1 |
Homo sapiens |
Heat shock factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR734VBC |
- |
22955616 |
txt
|
| CRISPRi |
RBBP7 |
Homo sapiens |
Others |
Chromatin Remodeling Factors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR235ZEI |
- |
22955616 |
txt
|
| CRISPRi |
HMGA1 |
Homo sapiens |
A.T hook factors |
beta-Sheet binding to DNA |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR069OUL |
- |
22955616 |
txt
|
| CRISPRi |
NFYA |
Homo sapiens |
Heteromeric CCAAT-binding factors |
Other all-alpha-helical DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR096VPS |
- |
22955616 |
txt
|
| CRISPRi |
NR2C2 |
Homo sapiens |
Nuclear receptors with C4 zinc fingers |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR808HQN |
- |
22955616 |
txt
|
| CRISPRi |
SIX5 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR104QKG |
- |
22955616 |
txt
|
| CRISPRedit |
DROSHA |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR991XFO |
- |
- |
txt
|
| CRISPRedit |
SRSF7 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR845MNM |
- |
- |
txt
|
| CRISPRedit |
RBM14 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR166MWM |
- |
- |
txt
|
| CRISPRedit |
SRSF4 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR471INA |
- |
- |
txt
|
| CRISPRedit |
CEBPZ |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR637EFF |
- |
- |
txt
|
| CRISPRedit |
SRSF7 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR139LOF |
- |
- |
txt
|
| CRISPRedit |
PTBP1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR415DJT |
- |
- |
txt
|
| CRISPRedit |
HNRNPH1 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR354RSR |
- |
- |
txt
|
| CRISPRedit |
POLR2G |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR580TGX |
- |
- |
txt
|
| CRISPRedit |
SYNCRIP |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR680OJB |
- |
- |
txt
|
| CRISPRedit |
SAFB |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR336TYW |
- |
- |
txt
|
| CRISPRedit |
SRSF4 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR905NIK |
- |
- |
txt
|
| CRISPRedit |
SRSF9 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR972AZD |
- |
22955616 |
txt
|
| CRISPR-Csm |
SMARCA1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE220741 |
GPL24676 |
- |
txt
|
| CRISPR |
BRD4 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
CD8+ T cells |
Lymph |
Primary cell |
GEO |
GSE173918 |
GPL24676 |
34861037 |
txt
|
| CRISPR |
PRDM1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
CD8+ T cells |
Lymph |
Primary cell |
GEO |
GSE173918 |
GPL24676 |
34861037 |
txt
|
| CRISPR |
FOXQ1 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Primary CD4+ T cells |
Lymph |
Primary cell |
GEO |
GSE174284 |
GPL18573 |
35113687 |
txt
|
| CRISPR |
MAEL |
Homo sapiens |
HMG |
TcoF-DB_TF |
Alexander cells |
Liver |
Cell line |
GEO |
GSE175454 |
GPL20301 |
35740546 |
txt
|
| CRISPR |
STAT5B |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
HEK293 |
Embryo_kidney |
Cell line |
GEO |
GSE175508 |
GPL24676 |
- |
txt
|
| CRISPR |
FOXP3 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
Naive Treg |
Peripheral_blood |
Cell line |
GEO |
GSE176191 |
GPL18573 |
- |
txt
|
| CRISPR |
POU2AF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
OCI-Ly7 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE183741 |
GPL20301 |
- |
txt
|
| CRISPR |
POU2AF1 |
Homo sapiens |
Others |
TcoF-DB_TF |
SUDHL4 |
Lymph |
Cell line |
GEO |
GSE183741 |
GPL20301 |
- |
txt
|
| CRISPR |
FOXA2 |
Homo sapiens |
Fork head / winged helix factors |
Helix-turn-helix domains |
iPSCs-derived progenitors and mature hepatocytes |
Liver |
Cell line |
GEO |
GSE190763 |
GPL20301 |
35973994 |
txt
|
| CRISPR |
RELB |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
SW480 |
Colon |
Cell line |
GEO |
GSE197576 |
GPL18573 |
35487218 |
txt
|
| CRISPR |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CHP-134 |
Neuroblastoma |
Cell line |
GEO |
GSE121529 |
GPL17077 |
30584073 |
txt
|
| CRISPR |
MYCN |
Homo sapiens |
Basic helix-loop-helix factors (bHLH) |
Basic domains |
CHP-134 |
Neuroblastoma |
Cell line |
GEO |
GSE121530 |
GPL17077 |
30584073 |
txt
|
| CRISPR |
ZFP36L1 |
Homo sapiens |
zf-CCCH |
Zinc-Coordinating Group |
NCI-H1876 |
Lung |
Cell line |
GEO |
GSE202112 |
GPL24676 |
- |
txt
|
| CRISPR |
CREBBP |
Homo sapiens |
Others |
Co-activator/repressors |
U2932 |
Lymph |
Cell line |
GEO |
GSE89879 |
GPL16791 |
28831000 |
txt
|
| CRISPR |
APTX |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR049HPU |
- |
22955616 |
txt
|
| CRISPR |
CDC5L |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR608EQY |
- |
22955616 |
txt
|
| CRISPR |
CHCHD3 |
Homo sapiens |
Others |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR221MPE |
- |
22955616 |
txt
|
| CRISPR |
CIZ1 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR765HSN |
- |
22955616 |
txt
|
| CRISPR |
CTCF |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR613LSQ |
- |
22955616 |
txt
|
| CRISPR |
DDX59 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR126UCL |
- |
22955616 |
txt
|
| CRISPR |
E4F1 |
Homo sapiens |
Zinc-coordinating DNA-binding domains |
C2H2 zinc finger factors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR916PCG |
- |
22955616 |
txt
|
| CRISPR |
PRRX1 |
Homo sapiens |
Homeo domain factors |
Helix-turn-helix domains |
691-MES |
Neuroblastoma |
Cell line |
GEO |
GSE97426 |
GPL570 |
30948783 |
txt
|
| CRISPR |
EIF2AK2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR628AFF |
- |
22955616 |
txt
|
| CRISPR |
ERN1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR026FEM |
- |
22955616 |
txt
|
| CRISPR |
FUBP3 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR619GGE |
- |
22955616 |
txt
|
| CRISPR |
MECP2 |
Homo sapiens |
Others |
TcoF-DB_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR665DMA |
- |
22955616 |
txt
|
| CRISPR |
PAN2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR204OEJ |
- |
22955616 |
txt
|
| CRISPR |
RPS3 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR865UKM |
- |
22955616 |
txt
|
| CRISPR |
SMAD2 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR016WTN |
- |
22955616 |
txt
|
| CRISPR |
SMAD4 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR965MSX |
- |
22955616 |
txt
|
| CRISPR |
SMAD5 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR649MBU |
- |
22955616 |
txt
|
| CRISPR |
XRCC5 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR276GMG |
- |
22955616 |
txt
|
| CRISPR |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR659UXO |
- |
22955616 |
txt
|
| CRISPR |
ZNF574 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR064VKV |
- |
22955616 |
txt
|
| CRISPR |
ANXA2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR862BCF |
- |
22955616 |
txt
|
| CRISPR |
APTX |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR731TJP |
- |
22955616 |
txt
|
| CRISPR |
CIZ1 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR749QMU |
- |
22955616 |
txt
|
| CRISPR |
CTCF |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR871XPX |
- |
22955616 |
txt
|
| CRISPR |
E4F1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR308EYT |
- |
22955616 |
txt
|
| CRISPR |
ERN1 |
Homo sapiens |
Others |
Other Cofactors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR005UDT |
- |
22955616 |
txt
|
| CRISPR |
MECP2 |
Homo sapiens |
Others |
TcoF-DB_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR266XKN |
- |
22955616 |
txt
|
| CRISPR |
SOX2 |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
TCam-2 |
Seminoma-like |
Tissue |
GEO |
GSE79065 |
GPL10558 |
27283990 |
txt
|
| CRISPR |
NFX1 |
Homo sapiens |
NFX1-type putative zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR548ORV |
- |
22955616 |
txt
|
| CRISPR |
PAN2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR874MHJ |
- |
22955616 |
txt
|
| CRISPR |
SMAD2 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR036ANR |
- |
22955616 |
txt
|
| CRISPR |
SMAD4 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR700FWD |
- |
22955616 |
txt
|
| CRISPR |
SMAD5 |
Homo sapiens |
SMAD/NF-1 DNA-binding domain factors |
beta-Hairpin exposed by an alpha/beta-scaffold |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR383QYT |
- |
22955616 |
txt
|
| CRISPR |
SRPK2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR929EIP |
- |
22955616 |
txt
|
| CRISPR |
YBX1 |
Homo sapiens |
Cold-shock domain factors |
beta-Barrel DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR548OTL |
- |
22955616 |
txt
|
| CRISPR |
ZNF574 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR821GQN |
- |
22955616 |
txt
|
| CRISPR |
ACTN4 |
Homo sapiens |
Actin |
Chromatin Remodeling Factors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR029LLJ |
- |
22955616 |
txt
|
| CRISPR |
DDX20 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR429OUR |
- |
22955616 |
txt
|
| CRISPR |
DNMT3B |
Homo sapiens |
Other C4 zinc finger-type factors |
Zinc-coordinating DNA-binding domains |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR290GUQ |
- |
22955616 |
txt
|
| CRISPR |
CNOT7 |
Homo sapiens |
CCR4-NOT |
Chromatin Remodeling Factors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR836XZH |
- |
22955616 |
txt
|
| CRISPR |
STAT3 |
Homo sapiens |
STAT domain factors |
Immunoglobulin fold |
hESC |
Embryo |
Stem cell |
GEO |
GSE132561 |
GPL13497 |
- |
txt
|
| CRISPR |
NPM1 |
Homo sapiens |
Nucleoplasmin |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR034NAT |
- |
22955616 |
txt
|
| CRISPR |
DDX17 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR613ZVB |
- |
22955616 |
txt
|
| CRISPR |
ACTN4 |
Homo sapiens |
Actin |
Chromatin Remodeling Factors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR870TGO |
- |
22955616 |
txt
|
| CRISPR |
SNW1 |
Homo sapiens |
Others |
Other Cofactors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR458FLK |
- |
22955616 |
txt
|
| CRISPR |
DDX20 |
Homo sapiens |
RNA helicase |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR867XAL |
- |
22955616 |
txt
|
| CRISPR |
PAN2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR932GTJ |
- |
22955616 |
txt
|
| CRISPR |
CHCHD3 |
Homo sapiens |
Others |
Co-activator/repressors |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR206ICZ |
- |
22955616 |
txt
|
| CRISPR |
SEPT11 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR036HUB |
- |
22955616 |
txt
|
| CRISPR |
APTX |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR489DNH |
- |
22955616 |
txt
|
| CRISPR |
RIOK2 |
Homo sapiens |
Others |
ENCODE_TF |
HepG2 |
Liver |
Cell line |
ENCODE |
ENCSR485ZHW |
- |
22955616 |
txt
|
| CRISPR |
CHCHD3 |
Homo sapiens |
Others |
Co-activator/repressors |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR307GHU |
- |
22955616 |
txt
|
| CRISPR |
APTX |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR148HLA |
- |
22955616 |
txt
|
| CRISPR |
SMG5 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR183WOW |
- |
22955616 |
txt
|
| CRISPR |
CDC5L |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR544ZMX |
- |
22955616 |
txt
|
| CRISPR |
SMG7 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR157IJG |
- |
22955616 |
txt
|
| CRISPR |
RIOK2 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR262ZBE |
- |
22955616 |
txt
|
| CRISPR |
SEPT11 |
Homo sapiens |
Others |
ENCODE_TF |
K562 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
ENCODE |
ENCSR727WPW |
- |
22955616 |
txt
|
| CRISPR |
ARID2 |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
JHH4 |
Liver |
Cell line |
GEO |
GSE144021 |
GPL570 |
32113157 |
txt
|
| CRISPR |
ELF3 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HBDEC2 |
Bile_duct |
Cell line |
GEO |
GSE148105 |
GPL20844 |
- |
txt
|
| CRISPR |
CIC |
Homo sapiens |
High-mobility group (HMG) domain factors |
Other all-alpha-helical DNA-binding domains |
HEK293a |
Embryo_kidney |
Cell line |
GEO |
GSE80359 |
GPL16686 |
28295365 |
txt
|
| CRISPR |
ARID3B |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
HCT15 |
Colon |
Cell line |
GEO |
GSE92838 |
GPL570 |
- |
txt
|
| CRISPR |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
MDA-MB-231 |
Mammary_gland |
Cell line |
GEO |
GSE100483 |
GPL16791 |
29891505 |
txt
|
| CRISPR |
SKI |
Homo sapiens |
SKI |
Co-activator/repressors |
HL60 |
Blood |
Cell line |
GEO |
GSE107555 |
GPL18460 |
29471413 |
txt
|
| CRISPR |
TET1 |
Homo sapiens |
CXXC zinc finger factors |
Zinc-coordinating DNA-binding domains |
Hs578T |
Mammary_gland |
Cell line |
GEO |
GSE115578 |
GPL16791 |
- |
txt
|
| CRISPR |
CREBBP |
Homo sapiens |
Others |
Co-activator/repressors |
U5-NPC |
Brain |
Cell line |
GEO |
GSE116970 |
GPL11154 |
34101353 |
txt
|
| CRISPR |
PTPN14 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
U5-NPC |
Brain |
Cell line |
GEO |
GSE116970 |
GPL11154 |
34101353 |
txt
|
| CRISPR |
TP53 |
Homo sapiens |
p53 domain factors |
Immunoglobulin fold |
U5-NPC |
Brain |
Cell line |
GEO |
GSE116970 |
GPL11154 |
34101353 |
txt
|
| CRISPR |
EZH2 |
Homo sapiens |
Others |
TcoF-DB_TF |
SKOV3 |
Ovary |
Cell line |
GEO |
GSE145692 |
GPL20301 |
- |
txt
|
| CRISPR |
TCF19 |
Homo sapiens |
Others |
TcoF-DB_TF |
CAL27 |
Oral_squamous |
Cell line |
GEO |
GSE153354 |
GPL20795 |
- |
txt
|
| CRISPR |
HIC1 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
PC3 |
Prostate |
Cell line |
GEO |
GSE141642 |
GPL21185 |
- |
txt
|
| CRISPR |
KAT6A |
Homo sapiens |
C2HC zinc finger factors |
Zinc-coordinating DNA-binding domains |
MOLM-13 |
Haematopoietic_and_lymphoid_tissue |
Cell line |
GEO |
GSE156948 |
GPL24676 |
- |
txt
|
| CRISPR |
PRDM15 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
Immortalized human podocytes |
Kidney |
Cell line |
GEO |
GSE159978 |
GPL18573 |
- |
txt
|
| CRISPR |
KDM5A |
Homo sapiens |
ARID domain factors |
Helix-turn-helix domains |
GLC16 |
Lung |
Cell line |
GEO |
GSE161513 |
GPL18573 |
31727771 |
txt
|
| CRISPR |
ASXL1 |
Homo sapiens |
Others |
Other Cofactors |
iPSC |
Embryo |
Cell line |
GEO |
GSE163034 |
GPL18573 |
28215825 |
txt
|
| CRISPR |
IKZF2 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
CAR T Cell |
Lymph |
Primary cell |
GEO |
GSE163400 |
GPL16791 |
33328215 |
txt
|
| CRISPR |
TLE4 |
Homo sapiens |
Transducin |
TcoF-DB_TcoF |
CAR T Cell |
Lymph |
Primary cell |
GEO |
GSE163400 |
GPL16791 |
33328215 |
txt
|
| CRISPR |
RELA |
Homo sapiens |
Rel homology region (RHR) factors |
Immunoglobulin fold |
T30 |
Brain |
Cell line |
GEO |
GSE163401 |
GPL16791 |
33328215 |
txt
|
| CRISPR |
SUMO1 |
Homo sapiens |
Others |
TcoF-DB_TcoF |
U2OS |
Bone_marrow |
Cell line |
GEO |
GSE163884 |
GPL20301 |
34232706 |
txt
|
| CRISPR |
SATB2 |
Homo sapiens |
CUT |
Helix-turn-helix |
Colon organoid |
Colon |
Organoid |
GEO |
GSE167285 |
GPL24676 |
34582804 |
txt
|
| CRISPR |
ZKSCAN3 |
Homo sapiens |
C2H2 zinc finger factors |
Zinc-coordinating DNA-binding domains |
HCT116 |
Colon |
Cell line |
GEO |
GSE172201 |
GPL24676 |
- |
txt
|
| Cas13 |
SMARCA1 |
Homo sapiens |
Tryptophan cluster factors |
Helix-turn-helix domains |
HEK293T |
Embryo_kidney |
Cell line |
GEO |
GSE220741 |
GPL24676 |
- |
txt
|