ACC;Class:TCGA;Sub_Class:Mutations		SLMO2	C12orf36	FAM178A	C8orf31	C5orf56	WDR16
BLCA;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	C16orf53	C1orf213	CCDC55	C12orf36	FAM178A	C22orf25	GOLGA2B	C3orf35	C10orf25	C10orf91	C17orf77	CRAMP1L	FAM125A	C3orf71	EIF2C3	KIAA0495	C14orf182	C19orf42	PGCP	C9orf106	C22orf24	GSTT1	DOM3Z	SOLH	C8orf31	C15orf56	HDGFRP3	PLK1S1	C1orf103	C12orf44	CCDC135	SLMO2	C5orf55	STAG3L4	KIAA1012	C10orf137	C15orf53	FAM59A	KIAA0284	C16orf3	C12orf52	C16orf63	WDR16
BLCA-CN;Class:ICGC;Sub_Class:Mutations		LRRC37A11P	MIR205HG	BAGE2	WDR16	PI4KAP2
BLCA-US;Class:ICGC;Sub_Class:Mutations		SPATA31C1	DHRS4L1	SLC22A20	PVRL2	C1orf213	TP73-AS1	C12orf36	FAM178A	C10orf111	C15orf32	CHL1-AS1	C3orf35	CCDC144B	C10orf91	CRAMP1L	STAG3L5P-PVRIG2P-PILRB	ARMCX5-GPRASP2	C17orf104	MCF2L-AS1	C14orf182	STARD7-AS1	PRSS3P2	C22orf24	GSTT1	BAGE2	PLEKHA8P1	HDGFRP3	CCDC135	SLMO2	STAG3L4	C12orf77	DYX1C1-CCPG1	VPS9D1-AS1	C5orf66	WDR16
BOCA-FR;Class:ICGC;Sub_Class:Mutations		LINC00226	LINC00639	ADAM6	PVRL2
BOCA-UK;Class:ICGC;Sub_Class:Mutations		PRSS3P2	LINC00221	LINC00174
BRCA;Class:TCGA;Sub_Class:Mutations		C16orf53	C12orf36	C3orf27	FAM178A	C3orf35	CCDC144B	C10orf91	C17orf77	TMCO7	CRAMP1L	C3orf71	EIF2C3	KIAA0495	C17orf104	PGCP	C9orf106	C22orf24	GSTT1	C9orf37	DOM3Z	SOLH	C8orf31	C15orf56	HDGFRP3	PLK1S1	C1orf103	C12orf44	STAG3L4	C1orf104	KIAA1012	FAM59A	C16orf3	C16orf63	C4orf6
BRCA-EU;Class:ICGC;Sub_Class:Mutations		CASC16	XIST	MIR100HG	LINC00502	LINC00477	MALAT1	MST1L	RPLP0P2	SDHAP1	C12orf36	RAD21-AS1	LINC00842	LINC00977	C5orf56	SUCLG2-AS1	SRGAP2-AS1	LOC153910	FAM74A1	TSIX	LOC101929268	CXXC1P1	LINC00691	MIR4500HG	SNORD116-4	LINC00423	LINC01410	CRAMP1L	LPAL2	ECEL1P2	BTN2A3P	USP27X-AS1	LINC00226	LRRC37A11P	LINC00693	LINC00511	FER1L6-AS2	TAPT1-AS1	GLUD1P7	LRRC37A6P	LOC101929532	BAGE2	PLEKHA8P1	USP32P2	LINC00174	LINC01370	CCDC135	LINC00221	LINC00945	DUXAP8	FAM27E3	CHEK2P2	LOC101927314	SNAP25-AS1	LINC00457	LINC00478	FAM95B1	LINC01204	DDX11L16	MTHFD2P1	LINC00824	TTN-AS1	PVRL2	HOTAIR	LINC00669	FAM230B
BRCA-FR;Class:ICGC;Sub_Class:Mutations		SNORA7B	CRAMP1L	CCDC135
BRCA-KR;Class:ICGC;Sub_Class:Mutations		LINC00645	RASAL2-AS1	NSUN5P1	FAM27L	ABCA11P	ESPNP	SDHAP1	CROCCP2	NCAM1-AS1	LINC00523	PI4KAP1	KLRAP1	LRRC37A6P	MST1P2	BAIAP2-AS1	LINC01410	CCDC162P	NSUN5P2	HCG4
BRCA-UK;Class:ICGC;Sub_Class:Mutations		FAM182A	LINC00221	DPY19L2P1	LINC00674	LINC00226	RPL23P8	HERC2P2	C20orf166-AS1	TCAM1P	ELK2AP	FAM178A	RRN3P3	SMG1P1	LOC339593	BCRP2	LINC00665
BRCA-US;Class:ICGC;Sub_Class:Mutations		CES5AP1	MIR335	KU-MEL-3	IPO9-AS1	RASA4CP	CTSLP2	AQP4-AS1	MRVI1-AS1	BTN2A3P	LINC00265	LRRC37A11P	LINC00987	HMGN2P46	DIO3OS	SNORD46	C21orf37	NSUN5P1	DNM1P46	LINC00316	TMEM51-AS1	RP9P	MIR133A1HG	LOC100506207	ZNF295-AS1	HOXA10-AS	MEG9	RRP7B	RNU5D-1	SNORD37	C17orf77	C21orf128	DLEU2	HSFY1P1	FAM86JP	C9orf106	C7orf65	LINC00521	LOC642846	SPAG5-AS1	BPIFA4P	SCARNA10	MIR142	NREP-AS1	SLC22A20	FAM86DP	MALAT1	PMS2P3	SNORA67	GOLGA6L7P	NKAPP1	LIFR-AS1	C15orf32	THAP7-AS1	C3orf35	RUSC1-AS1	CRAMP1L	ZEB2-AS1	LOC101928882	WASH3P	C7orf71	LINC00852	LRRC37A6P	USP32P2	DDX11L9	MIR600HG	AMZ2P1	C20orf197	C2orf27A	AOC4P	FAM230B	NAPSB	CACNA1C-AS1	TP73-AS1	MIR497HG	LINC00854	DLGAP1-AS1	ZNF192P1	HIF1A-AS1	GUSBP1	LINC00200	LINC00661	ADCY10P1	SCARNA12	ADAM6	ZRANB2-AS1	TUBA3FP	TERC	C1orf220	LINC00645	BMS1P4	LMLN-AS1	LINC00202-1	SNORD100	ZNF815P	SCARNA6	HNRNPKP3	DPY19L2P2	RNU11	CA5BP1	LINC00951	C17orf82	ENTPD1-AS1	DDX11L16	FUT8-AS1	MATN1-AS1	LOC100240728	ITPK1-AS1	OR7E47P	RNU5E-1	LINC00665	C10orf91	PIR-FIGF	C1QTNF9B-AS1	SNORD116-18	MRPL45P2	ADAM5	C14orf182	LINC00893	STAG3L1	LGALS17A	TLR8-AS1	C22orf24	HDGFRP3	LINC00273	RNF219-AS1	STAU2-AS1	DKFZP434H168	LINC00052	LINC00221	RPL13P5	WDR16	CCNYL2	ALG1L9P	KRTAP5-AS1	RPLP0P2	HERC2P4	USP32P1	REG1P	ANKRD20A5P	PI4KAP2	SEPT7P2	SLC25A3P1	SNORA14B	LINC01410	SNORD19B	HOXA-AS3	CTBP1-AS2	MCF2L-AS1	PMCHL1	MLK7-AS1	RRN3P2	C16orf80	ANKRD19P	MRPL23-AS1	TP53TG1	MIPEPP3	LRRC37A5P	ASH1L-AS1	ANKRD36BP1	LINC00618	SNORD32A	SDHAP1	LINC00898	POLR2J4	RPL13AP3	C21orf88	CCDC144B	MDS2	KRT16P1	SLC7A11-AS1	PMCHL2	CSNK1A1P1	FAM157B	LINC00649	ELK2AP	FLJ33360	C9orf163	LINC00326	LINC00226	FER1L4	PI4KAP1	C9orf37	FAM99B	RPL23AP7	FAM86B3P	C12orf77	GJA9-MYCBP	CHEK2P2	TBC1D3P1-DHX40P1	IDI2-AS1	CATSPER2P1	AOX2P	CIDECP	FAM182A	SND1-IT1	SAP30L-AS1	FBXL21	MYH16	C5orf56	MIR3179-1	LINC00152	ENTPD3-AS1	LOC91450	DDX11L1	RRN3P1	ZNF385D-AS2	SLCO4A1-AS1	TMEM198B	LINC00222	RNF216P1	VSTM2A-OT1	MIR205HG	PPAPDC1B	C3orf65	SUGT1P3	SAA3P	RFPL1S	DDX11L10	TCL6	HCG9	ANKRD20A11P	LINC00294	LOC100130357	CD27-AS1	C10orf85	LINC00304	HERC2P3	RAET1K	LINC00471	DSCR4	CCL3L1	PINK1-AS	FAM86HP	C15orf56	TRAF3IP2-AS1	LINC00479	MIR490	STXBP5-AS1	WEE2-AS1	MIR3179-2	MIR17HG	LINC01011	SHANK2-AS3	FCGR1C	FAHD2CP	C4orf6	LOC103171574	FAM41C	TRG-AS1	ANKRD26P1	LINC00470	DPY19L2P4	SMG1P1	RPS10P7	DGUOK-AS1	PPIEL	LOC100507053	CLRN1-AS1	ZDHHC8P1	CDRT7	SNORD79	SCAND2P	ALMS1P	POM121L9P	PIN1P1	STAG3L5P-PVRIG2P-PILRB	PCOLCE-AS1	C9orf170	AFG3L1P	GHRLOS	SH3GL1P1	AGAP11	ZNF37BP	PLEKHA8P1	EPHA5-AS1	C4B_2	ANKRD18DP	CCDC183-AS1	ZBED3-AS1	HLA-J	EFCAB6-AS1	CYP1B1-AS1	WHAMMP3	FAM66E	LOC100499484-C9ORF174	RAPGEF4-AS1	TTTY23B	FAM178A	RRN3P3	HLA-F-AS1	MIR3179-3	GGT3P	GUSBP5	ARMCX5-GPRASP2	LINC00313	UGDH-AS1	C17orf104	ZNF252P	ATP13A4-AS1	CCT6P1	DGCR5	ZNF833P	BAGE2	BCYRN1	FBXL19-AS1	C17orf102	SNORD18A	NCF1B	SNORA11	C1orf200	PVRL2	ZNF733P	GOLGA2P6	ZFAS1	XIST	SNHG12	LINC00477	GABARAPL3	MAP3K14-AS1	LOC648691	LINC00299	SCARNA2	ESPNP	FAM205B	H19	SEC1P	FAM27L	PRSS3P2	MCM3AP-AS1	TAPT1-AS1	HCP5	C8orf31	C21orf119	C15orf53	EGFEM1P	NBR2	GUSBP11	MST1L	CIRBP-AS1	LINC01060	SNORA14A	MRPS31P5	SNORA48	PDXDC2P	SERF2-C15ORF63	NSUN5P2	TPT1-AS1	TSIX	LINC00488	MIR155HG	TMEM191A	HERC2P9	EPB41L4A-AS1	LINC00207	GSTT1	KRT18P55	SEPT7P9	C7orf66	STAG3L4	LOC100499484	CROCCP2	CROCCP3	MT1DP	LINC00478	C20orf166-AS1	ZNRD1-AS1	FLJ37453	GNG12-AS1	GTF2H2B	UXT-AS1	KIF25-AS1	C12orf36	LINC00957	IGF2-AS	MIR140	SNORD4A	ERVK13-1	PPY2	ABCA11P	WT1-AS	C1orf140	LOC100505978	PTPRVP	MIR206	ZNF702P	ANKRD20A19P	HLA-DRB6	LOC644554	LINC00982	MBL1P	LINC00303	LINC00588	ATP11AUN	NOP14-AS1	KRT42P	FAM86C2P	OTX2-AS1	FLJ33534	PHKA2-AS1	FLJ40288	COLCA1	TPTE2P5	LINC00032	SRRM2-AS1	DHRS4-AS1	SNORD57	MTOR-AS1	LPAL2	PTENP1	MIR7-3HG	HERC2P2	WDR52-AS1	SNORA75	MIR195	TTC28-AS1	LINC01262	CTD-2201I18.1	FAM92A1P2	H1FX-AS1	PPP4R1L	WWC2-AS2	RNVU1-19	FAM86EP	TBC1D3P5	CYP4F30P	ZNF271	KIAA0125	ADAM3A	ZSCAN12P1	WDFY3-AS2	ANKRD36BP2	LOC101927237	LINC00342	GRM5-AS1	STAG3L5P	LINC01452	DKFZp434L192	AP4B1-AS1	PCBP1-AS1	CCDC135	NAMA	LINC00174	CSN1S2AP
BTCA-JP;Class:ICGC;Sub_Class:Mutations		XIST	SDHAP1	TRG-AS1	HGC6.3	IL12A-AS1	MAP3K14-AS1	IGF2-AS	LOC101927911	KIAA0125	ESPNP	CMAHP	ALMS1P	ELK2AP	ARMCX5-GPRASP2	LPAL2	SNORD116-20	LINC00226	PRSS3P2	BAGE2	C9orf139	LINC00221	C20orf166-AS1	MIR205HG	C1orf200	DTX2P1-UPK3BP1-PMS2P11	PVRL2	LINC00618	HCG4	LOC100294145
BTCA-SG;Class:ICGC;Sub_Class:Mutations		LINC00938	LINC01060	LINC00538	LINC00589	EP300-AS1	C3orf27	SMIM2-AS1	NDUFB2-AS1	SNORD50A	LINC01192	C3orf79	LOC101927575	TPT1-AS1	LINC00691	PIR-FIGF	LINC00708	C14orf182	CASC8	AADACL2-AS1	LOC100507205	LOC101929473	STXBP5-AS1	LINC00221	LINC01249	USP2-AS1	LINC00900	MIR133A1HG	WDR16	LINC00669	NR2F2-AS1	LINC01029	MIR100HG	LINC01015	LINC00535	LINC00924	LINC00470	LINC00301	RPS10P7	LINC01449	LINC01102	LINC01185	CDRT7	ZNF826P	TEX41	CCNT2-AS1	LINC01340	LINC00536	CTBP1-AS2	BDNF-AS	BAALCOS	ANKRD19P	LINC01085	DPH6-AS1	LOC102546299	LOC646903	LOC285696	LINC01213	LOC101927550	LINC00158	TMEM161B-AS1	CYP1B1-AS1	APOC1P1	TRIM52-AS1	CLLU1	LOC100134368	MDS2	LINC00683	SLC8A1-AS1	ELK2AP	LINC01280	F11-AS1	LINC01122	LINC01107	PTENP1	LINC00698	LINC00461	LINC00226	LINC01422	HAGLR	LMCD1-AS1	BCYRN1	PKN2-AS1	LINC00928	PWARSN	KDM4A-AS1	LRRC75A-AS1	FAM92A1P2	SPATA42	XIST	CACNA1C-AS1	LINC00477	CTB-7E3.1	CPEB2-AS1	LOC102723427	NALCN-AS1	DLGAP1-AS1	FLJ41278	FAM183CP	KIAA0125	LINC00200	PVRL3-AS1	ADAM6	ARHGEF26-AS1	CSTF3-AS1	LINC00968	LINC00645	BVES-AS1	LOC101927237	SH3BP5-AS1	ZNF667-AS1	IGFBP7-AS1	HNRNPKP3	CCDC135	SNHG10	DPP9-AS1	C21orf119	LOC101927314	PRICKLE2-AS3	KLRAP1	LINC01205	ENTPD1-AS1	TTN-AS1	C8orf87	LOC100129620
CESC;Class:TCGA;Sub_Class:Mutations		STAG3L4	C10orf25	C14orf182	C3orf27	C12orf36	C9orf106	GSTT1	FAM178A	BAGE2	CRAMP1L	C15orf56	C3orf35
CESC-US;Class:ICGC;Sub_Class:Mutations		CES5AP1	LINC01443	LINC01168	LINC01285	LINC00489	LINC00298	LINC00319	LINC00322	KU-MEL-3	MLLT4-AS1	IPO9-AS1	NPSR1-AS1	RASA4CP	LINC01061	LINC00923	CTSLP2	LOC101929413	GUSBP2	LINC00314	DLGAP1-AS5	LOC100131496	MRVI1-AS1	BTN2A3P	LINC00999	LRRC37A11P	LINC01364	LINC01128	UBL7-AS1	DIO3OS	PMS2P9	NSUN5P1	DNM1P46	ALOX12P2	TMEM51-AS1	LINC00900	MIR133A1HG	ZNF295-AS1	HOXA10-AS	LINC00266-1	LINC00930	MEG9	OIP5-AS1	ST7-AS2	BCRP2	MIR137HG	TM4SF19-AS1	SNORA57	RRP7B	SNORD109A	GACAT2	FLVCR1-AS1	FKBP1A-SDCBP2	FAM27C	LOC339593	CACTIN-AS1	DLEU2	SCOC-AS1	LAMTOR5-AS1	FAM86JP	C8orf49	C9orf106	DNAH17-AS1	C21orf49	SNHG24	LINC00368	C7orf65	LINC00521	MRGPRG-AS1	SNORD113-4	LINC00158	BPIFA4P	LIMS3-LOC440895	SLC22A20	CASC16	FAM86DP	MAGI2-AS3	MALAT1	LINC00869	PMS2P3	LL22NC01-81G9.3	ST7-OT4	NKAPP1	LOC100506281	LIFR-AS1	CELSR3-AS1	GOLGA6L7P	SUCLG2-AS1	THAP7-AS1	LOC283683	C3orf35	RUSC1-AS1	C10orf25	MIATNB	PVT1	CRAMP1L	LOC100129931	LINC00574	LOC103344931	LOC101929106	ABCC6P1	LINC00599	LOC101928882	WASH3P	ABCC13	LINC00852	LRRC37A6P	ULK4P3	USP32P2	MIR600HG	AMZ2P1	LOC100506071	DSCR9	DUXAP8	LOC100132077	LOC100287036	LINC00476	LRRC75A-AS1	SERHL	AOC4P	OSTCP1	LINC00305	HCG4	RBM12B-AS1	CSAG4	FAM230B	NAPSB	MYCBP2-AS1	HCG17	RPL34-AS1	LOC101928441	CACNA1C-AS1	LOC101928847	HGC6.3	TP73-AS1	MIR202	EVX1-AS	MIR497HG	LINC00969	ZNF192P1	LOC101928201	ITPKB-IT1	LINC01419	LINC00200	GNAS-AS1	MIR2117	FLJ36000	ZRANB2-AS1	CMAHP	LINC00661	PSMB8-AS1	ADAM6	ADCY10P1	CSNK1G2-AS1	TUBA3FP	THUMPD3-AS1	LOC101929718	TERC	CASC6	C1orf220	LINC00645	BMS1P4	VENTXP1	LINC00657	LOC100144595	LINC00884	ZNF815P	LINC01001	LINC00442	FLJ46284	ZNF667-AS1	LINC00668	LINC00883	FAM87B	GUCY1B2	SNHG10	OVCH1-AS1	HNRNPKP3	CA5BP1	LINC00951	LOC101929572	DDX11L16	ENTPD1-AS1	TTN-AS1	C17orf82	CFLAR-AS1	TMEM44-AS1	NBEAP1	LOC100240728	ITPK1-AS1	LINC00538	C3orf27	LINC01191	OR7E47P	LINC00162	LINC00917	LINC00701	LINC00665	LINC00242	LINC01021	SNHG16	PIR-FIGF	LINC00336	SNORD116-4	SULT1C2P1	ANTXRLP1	LOC101927410	CECR7	LOC100287225	C14orf182	LINC00893	LINC00353	TLR8-AS1	HAND2-AS1	MIAT	LINC00862	LINC00273	PP7080	HLA-L	LINC00221	LINC00692	ZSCAN16-AS1	LINC01249	RPL13P5	ANKRD20A12P	MAMDC2-AS1	EIF1B-AS1	MIR22HG	INTS6-AS1	SDCBP2-AS1	LINC00587	WDR16	LINC00669	LINC00310	CCNYL2	LINC00673	ALG1L9P	NR2F2-AS1	LINC01098	KRTAP5-AS1	HERC2P4	LOC100507250	LOC283194	RPLP0P2	USP32P1	LOC100506124	ATP6V0E2-AS1	REG1P	THEG5	ANKRD20A5P	VTRNA2-1	EMC3-AS1	PI4KAP2	KCNIP2-AS1	LINC00341	LINC01140	LINC01018	SLC25A3P1	ABCA17P	LINC01088	LOC574538	LINC01410	LOC643406	HOXA-AS3	GTF3C2-AS1	LINC01270	HILS1	CTBP1-AS2	LOC100130587	LINC01104	DKFZp779M0652	MCF2L-AS1	PMCHL1	RRN3P2	ANKRD19P	MRPL23-AS1	MIPEPP3	LOC339298	CERS6-AS1	LOC285696	LINC01213	ASH1L-AS1	FAM157A	ANKRD36BP1	SNHG3	LNX1-AS2	LINC01010	GUSBP3	LINC00618	INHBA-AS1	SNORD32A	ZNF32-AS3	SDHAP1	LINC01304	SNORD93	ANKRD30BP2	LINC00898	POLR2J4	RPL13AP3	C21orf88	CTB-12O2.1	MIR4435-1HG	SNAI3-AS1	ANKRD62P1-PARP4P3	RSU1P2	MDS2	LOC101929268	ACVR2B-AS1	FAM157B	LINC00649	LOC101927131	FLJ33360	C9orf163	LINC01106	SIX3-AS1	LINC00326	FER1L4	PI4KAP1	LINC00324	LOC100287792	FLJ26245	NUP210P1	SNORD67	C9orf37	RPL23AP7	LOC100133077	PKN2-AS1	FAM86B3P	C12orf77	USP3-AS1	CHEK2P2	LINC01016	CTC-360P9.3	TBC1D3P1-DHX40P1	LOC101928283	PTPRG-AS1	IDI2-AS1	KANSL1-AS1	CATSPER2P1	LINC00492	AOX2P	FGF10-AS1	LINC00674	SND1-IT1	C22orf34	CTB-7E3.1	MIR4313	FAM74A3	MYH16	C5orf56	DLGAP1-AS4	LINC01289	MIR328	PVRL3-AS1	HP09025	MIR34A	TCAM1P	RRN3P1	ZNF385D-AS2	FLJ42393	PLAC4	LOC101928266	BVES-AS1	TMEM198B	SH3BP5-AS1	FER1L6-AS2	FAM83A-AS1	OR7E156P	FLJ12825	HCG11	MORC2-AS1	LINC00613	DPP9-AS1	SNORD82	VSTM2A-OT1	PROSER2-AS1	MIR205HG	PPAPDC1B	LINC00894	CLUHP3	LINC01356	LINC00994	LOC100129620	SUGT1P3	SAA3P	DHRS4L1	LINC01094	LOC100630923	LINC00514	SNORD114-1	MIMT1	RFPL1S	C3orf79	TCL6	CCDC162P	SNORA45B	ANKRD20A11P	LOC100288069	HCCAT5	LINC01186	DPY19L2P1	CXorf31	CRYBB2P1	FAM138B	LINC00304	HERC2P3	RAET1K	LOC400553	C5orf64	LINC00471	LINC00654	AADACL2-AS1	PINK1-AS	FAM86HP	LOC101928797	C15orf56	TRAF3IP2-AS1	DNM1P35	LINC00479	MIR490	LOC349160	RGMB-AS1	MIR17HG	LINC01011	LINC00905	FCGR1C	CYP4F35P	DTX2P1-UPK3BP1-PMS2P11	FAHD2CP	OR7E14P	VPS9D1-AS1	SNORD6	PITRM1-AS1	LINC01266	LOC103171574	ZNF890P	LOC283177	GSN-AS1	FRMPD3-AS1	LOC284788	A1BG-AS1	ANKRD26P1	LINC00301	LOC100507053	SMG1P1	ZDHHC8P1	SCAND2P	ZSWIM8-AS1	CLRN1-AS1	TEX41	NCAM1-AS1	ALMS1P	CRYM-AS1	POM121L9P	PIN1P1	LOC101927914	SNORD113-1	STAG3L5P-PVRIG2P-PILRB	LINC00877	LINC00229	LINC00652	AFG3L1P	C9orf170	ZNF37BP	AGAP11	SH3GL1P1	TMCO5B	PLEKHA8P1	LINC00643	LOC646903	SNHG11	MIR3180-1	EPHA5-AS1	C4B_2	LOC101927550	ANKRD18DP	ASMTL-AS1	CCDC183-AS1	HLA-J	LINC01189	APOC1P1	WHAMMP3	LINC01361	LINC01342	OPA1-AS1	FAM66E	SCARNA14	LOC100499484-C9ORF174	MIRLET7BHG	DBIL5P	MAGEA10-MAGEA5	LINC00346	FAM178A	RRN3P3	LINC00029	HLA-F-AS1	APTR	LINC01124	GGT3P	CXXC1P1	GUSBP5	SNORA32	LINC00960	RPPH1	MTUS2-AS1	ARMCX5-GPRASP2	F11-AS1	LINC01122	RNU5F-1	UGDH-AS1	BHLHE40-AS1	LINC00602	ZNF252P	ATP13A4-AS1	LINC00461	CCT6P1	DGCR5	URAHP	LINC00693	LINC01101	ZNF833P	BAGE2	TPTE2P6	BCYRN1	FBXL19-AS1	LINC00928	LOC100128494	LINC00620	C17orf102	BZRAP1-AS1	NCF1B	SNORA11	PRR34-AS1	CALML3-AS1	ZNF733P	PVRL2	GOLGA2P6	LOC101929439	LIMD1-AS1	ZFAS1	XIST	SNHG12	UBOX5-AS1	LINC01360	FTX	BLACE	MAP3K14-AS1	ULK4P2	LOXL1-AS1	CCDC148-AS1	ESPNP	H19	ZMIZ1-AS1	LINC01166	BAIAP2-AS1	SNHG1	TPTEP1	LOC100129316	LOC339975	LINC00968	PARD6G-AS1	FAM27L	MCM3AP-AS1	LRP4-AS1	LINC01105	LINC01138	LOC283731	STEAP2-AS1	KCTD21-AS1	KLRAP1	LINC01205	ADARB2-AS1	LOC100996671	LOC102724849	SPANXA2-OT1	PTGES2-AS1	LOC100294145	NBR2	RASAL2-AS1	LINC01020	LDLRAD4-AS1	LINC00609	MST1L	LINC01060	AGAP2-AS1	CIRBP-AS1	LINC00269	JHDM1D-AS1	GMDS-AS1	ANKRD20A9P	MRPS31P5	PDXDC2P	CDIPT-AS1	MIR1252	SERF2-C15ORF63	TPT1-AS1	LINC01005	NSUN5P2	MYLK-AS1	PTOV1-AS1	LOC100130370	TSIX	LINC00488	HCG25	FAM201A	SNORA51	VAC14-AS1	CNTN4-AS2	TMEM191A	NEAT1	SNORA65	SNORD116-20	HERC2P9	LINC00857	UCKL1-AS1	HMMR-AS1	SNHG5	LINC00207	LINC01164	ARHGAP5-AS1	GSTT1	SNORD115-13	LINC00622	C7orf66	CTC-338M12.4	STAG3L4	LOC100499484	CROCCP2	SSBP3-AS1	CROCCP3	LSP1P3	LINC00478	C20orf166-AS1	USP2-AS1	BCAR4	ZNF252P-AS1	ZNRD1-AS1	LINC00473	FLJ37453	C3orf67-AS1	LOC442028	LINC00381	UXT-AS1	EMR4P	LINC00662	PAX8-AS1	KIF25-AS1	C12orf80	LINC00523	SNORD115-26	LINC00671	C12orf36	MST1P2	LINC00957	CFL1P1	LOC388282	IGF2-AS	LINC01118	FLJ35934	RPS6KA2-IT1	LOC101928446	DNAJC27-AS1	ZNF826P	ADD3-AS1	LINC00208	RPL32P3	SNORD4A	ERVK13-1	PRICKLE2-AS1	ULK4P1	LOC101929124	TMED11P	LINC00443	LINC01123	PPY2	PWAR5	ABCA11P	LOC284933	LINC00944	BDNF-AS	FAM24B-CUZD1	LINC00616	CASC2	WT1-AS	LOC100505978	LINC00469	LINC00839	LINC01133	LOC102546299	CADM3-AS1	ZNF702P	LINC01341	LINC01231	HLA-DRB6	LOC644554	MEG3	LINC00982	LINC00940	KCNQ1OT1	MBL1P	LINC00303	SNORD114-20	LINC00588	KIF9-AS1	LOC100505782	DNAJB8-AS1	KRT42P	FAM86C2P	OTX2-AS1	FLJ33534	LOC100134368	LINC01310	FLJ40194	AP1B1P1	MIR646HG	TNRC6C-AS1	NR2F1-AS1	SRRM2-AS1	LINC00612	SNORD57	DHRS4-AS1	LIPE-AS1	LINC00922	LPAL2	MIR219A2	DNMBP-AS1	ST7-AS1	PTENP1	LOC550113	LINC01233	LINC01422	HERC2P2	SBDSP1	SCARNA13	LINC01246	LINC01247	C12orf61	LINC00670	C9orf139	KMT2E-AS1	TTC28-AS1	LINC01262	CTD-2201I18.1	LINC00941	RPARP-AS1	TRHDE-AS1	FAM225B	MTHFD2P1	H1FX-AS1	PPP4R1L	TMEM254-AS1	WWC2-AS2	B4GALT1-AS1	FAM86EP	IQCF5-AS1	TBC1D3P5	ZNF271	LMO7DN	KIAA0125	GSTTP2	LOC100128770	LOC101927476	ADAM3A	LINC01347	MIR143HG	C14orf23	LINC00937	ADPGK-AS1	WDFY3-AS2	ASB16-AS1	LOC101927237	ANKRD36BP2	LINC00342	LOC339059	DKFZp434L192	RBPMS-AS1	LINC00433	AP4B1-AS1	MIR663AHG	IGFBP7-AS1	LOC101927827	PCBP1-AS1	SNHG17	NAMA	CCDC135	LINC00467	LUCAT1	LOC100133669	GGTA1P	SEC24B-AS1
CHOL;Class:TCGA;Sub_Class:Mutations		SLMO2	C17orf77	C1orf104	EIF2C3
CLLE-ES;Class:ICGC;Sub_Class:Mutations		KIAA0125	NBPF18P	FAM27L	LINC00221	FAM86DP	LINC00226	HGC6.3	MIR646HG	ADAM6	ELK2AP	LOC101929439	C20orf197
COAD;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	CCDC55	C2orf3	C3orf27	FAM178A	FBXL21	C22orf25	GOLGA2B	C3orf35	CCDC144B	C10orf25	C10orf91	C17orf77	WDR16	CRAMP1L	C6orf26	FAM125A	C3orf71	C18orf34	EIF2C3	C17orf104	PLAC4	C14orf182	PGCP	C9orf106	AGAP11	C22orf24	FLJ37543	C18orf1	C9orf37	DOM3Z	C17orf108	C8orf31	GSTT1	HDGFRP3	PLK1S1	C1orf103	C12orf44	SOLH	CCDC135	C5orf55	STAG3L4	C1orf104	KIAA1609	TMEM66	KIAA1012	C10orf137	C15orf53	FAM59A	KIAA0284	C16orf3	C12orf52	C16orf63	C4orf6
COAD-US;Class:ICGC;Sub_Class:Mutations		SPATA31C1	DHRS4L1	ATP11AUN	CLLU1	FAM178A	C3orf79	TYMSOS	C15orf32	C6orf99	C3orf35	RUSC1-AS1	C10orf25	GNAS-AS1	COLCA1	C10orf91	FAM157B	CTSLP2	C17orf77	RBAKDN	CRAMP1L	C9orf163	ARMCX5-GPRASP2	C17orf104	PLAC4	C5orf64	FAM27L	DLEU2	C14orf182	BDNF-AS	DSCR4	PRSS3P2	C9orf170	C16orf80	AGAP11	C22orf24	GSTT1	C9orf37	BAGE2	C8orf31	HDGFRP3	LINC00862	C9orf139	C7orf65	C7orf66	CCDC135	C5orf55	C12orf77	LINC00221	C17orf102	C4B_2	C15orf53	PPAPDC1B	C16orf3	PVRL2	C5orf66	WDR16
COADREAD;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	CCDC55	C2orf3	C3orf27	FAM178A	FBXL21	C22orf25	GOLGA2B	C3orf35	CCDC144B	C10orf25	C10orf91	C17orf77	WDR16	CRAMP1L	C6orf26	FAM125A	C3orf71	C18orf34	EIF2C3	KIAA0495	C17orf104	PLAC4	C14orf182	PGCP	C9orf106	AGAP11	C22orf24	FLJ37543	C18orf1	C9orf37	DOM3Z	C17orf108	C8orf31	C15orf56	GSTT1	HDGFRP3	C1orf103	C12orf44	PLK1S1	SOLH	CCDC135	C5orf55	STAG3L4	C1orf104	KIAA1609	TMEM66	KIAA1012	TLX1NB	C10orf137	C15orf53	FAM59A	KIAA0284	C16orf3	C12orf52	C16orf63	C4orf6
COCA-CN;Class:ICGC;Sub_Class:Mutations		NBEAP1	DHRS4L1	SPATA31C1	LINC01443	MST1L	RPL23P8	LINC01060	NDUFB2-AS1	C3orf27	JHDM1D-AS1	MED4-AS1	RFPL1S	MRPS31P5	PDXDC2P	C10orf111	C3orf79	FAM87A	TCL6	KU-MEL-3	COL18A1-AS1	SRGAP2-AS1	NSUN5P2	DDX11L10	CASC20	HCCAT5	SNORD116-13	TSIX	TMPRSS11GP	DPY19L2P1	C10orf91	CTSLP2	CD27-AS1	SNHG16	C15orf37	FAM138B	C1QTNF9B-AS1	ST3GAL6-AS1	LINC00708	KIRREL3-AS3	HERC2P3	MRPL45P2	LOC101929140	USP27X-AS1	STAG3L1	LOC100508046	AADACL2-AS1	LGALS17A	LRRC37A11P	C22orf24	P2RX6P	SNORD115-13	SEPT7P9	LINC00862	LINC00273	PMS2P9	RNF219-AS1	RNASEH2B-AS1	SLMO2	STAG3L4	ZFAT-AS1	DNM1P46	LINC00221	CROCCP2	CTC-338M12.4	CROCCP3	LINC00478	ANKRD20A12P	TMEM51-AS1	USP2-AS1	DTX2P1-UPK3BP1-PMS2P11	SNORA68	FAHD2CP	LOC442028	C16orf3	LOC100506207	INTS6-AS1	LINC00473	WDR16	LINC01266	ZNRD1-AS1	LINC00587	CCNYL2	C9orf62	ALG1L9P	LINC00662	HERC2P4	LOC100506474	TRG-AS1	LINC00518	USP32P1	GSN-AS1	IL12A-AS1	REG1P	MST1P2	LINC00842	LINC00957	ANKRD26P1	ANKRD20A5P	LINC01118	LRRC37A5P	FAM66B	LINC01102	RPS10P7	PI4KAP2	CLRN1-AS1	ZSWIM8-AS1	RRP7B	TEX41	LINC01019	RBAKDN	MIR4500HG	ALMS1P	LINC01088	LINC01410	ABCA11P	C21orf128	GTF3C2-AS1	LINC01119	CTBP1-AS2	LINCR-0003	DLEU2	BDNF-AS	CASC2	HSFY1P1	LINC00276	MLK7-AS1	SSTR5-AS1	RRN3P2	FAM86JP	MIR10A	ANKRD19P	AGAP11	LINC01085	LINC00469	ZNF37BP	C16orf80	LOC100996385	SNHG24	CADM3-AS1	LOC642846	LINC01341	MRGPRG-AS1	LOC101927550	LINC01242	JAZF1-AS1	FAM157A	HLA-DRB6	SLC2A1-AS1	GAS6-AS1	C1orf229	WHAMMP3	LINC00303	OPA1-AS1	SLC22A20	LINC00482	SDHAP1	MIRLET7BHG	CLLU1	ANKRD30BP2	TTTY23B	NOP14-AS1	FAM86C2P	FAM178A	GOLGA6L7P	POLR2J4	RPL13AP3	THAP7-AS1	LOC283683	ANKRD62P1-PARP4P3	GGT3P	KRT16P1	SNORD7	LOC101928372	LINC00960	ELK2AP	LINC01257	LOC729732	LIPE-AS1	ARMCX5-GPRASP2	LPAL2	LINC01024	LINC00602	PTENP1	LINC00461	CCT6P1	LOC102724421	LINC00226	URAHP	HERC2P2	SOX21-AS1	WASH3P	LINC01246	LINC01247	LRRC37A6P	BAGE2	LINC01053	ZNF833P	TPTE2P6	AMZ2P1	TTTY14	LINC00620	LINC01262	LOC100132077	DUXAP8	CHEK2P2	LINC00910	NCF1B	TBC1D3P1-DHX40P1	CATSPER2P1	ZNF733P	OSTCP1	GOLGA2P6	LINC00871	HCG4	FAM182A	TPTE2P1	XIST	HOXA11-AS	LINC00477	LINC00674	HGC6.3	C22orf34	LINC01120	GABARAPL3	MIR4313	CPEB2-AS1	LINC00526	SNORD116-14	LINC00854	NALCN-AS1	C5orf56	TBC1D3P5	GUSBP1	SNORD116-26	KIAA0125	LINC00152	ESPNP	FLJ36000	C5orf27	FAM205B	LOC100130298	H19	ADAM6	ARHGEF26-AS1	TUBA3FP	C14orf23	SNHG1	DDX11L1	RRN3P1	TEN1-CDK3	LINC00475	C1orf220	PLAC4	IBA57-AS1	DLEU1	FAM27L	ANKRD36BP2	KIAA0087	LINC00342	BMS1P4	PRSS3P2	LINC00222	MCM3AP-AS1	TAPT1-AS1	LINC01452	FLJ12825	ZNF815P	PTGER4P2-CDK2AP2P2	C8orf31	LINC01001	CCDC135	NAMA	DPY19L2P2	MKNK1-AS1	KLRAP1	LINC01205	ENTPD1-AS1	TTN-AS1	SPANXA2-OT1	LOC100294145
DLBC;Class:TCGA;Sub_Class:Mutations		C17orf104	KIAA1609	TLX1NB	C17orf77	SOLH	DOM3Z	C8orf31	FAM125A	C12orf52	PLAC4	EIF2C3	C3orf35
DLBC-US;Class:ICGC;Sub_Class:Mutations		DSCR4	ELK2AP	KIAA0125
EOPC-DE;Class:ICGC;Sub_Class:Mutations		LINC00221	LPAL2	ADAM6	C20orf166-AS1	PLEKHA8P1	ANKRD20A11P	C17orf104
ESAD-UK;Class:ICGC;Sub_Class:Mutations		GUSBP11	NBEAP1	CES5AP1	GAS5	MEF2C-AS1	LINC01445	LINC01060	C3orf27	RFPL1S	C3orf79	FLJ30403	RNU5E-1	NPSR1-AS1	ANKRD20A11P	GDNF-AS1	LOC646762	DPY19L2P1	LINC00426	LINC01239	MGC27382	FAM66C	C1QTNF9B-AS1	LPHN3-AS1	ANTXRLP1	SNORD116-18	UCA1	AQP4-AS1	HERC2P3	RAET1K	BTN2A3P	LINC00707	LINC00471	CASC8	SNHG5	LINC00971	LGALS17A	LRRC37A11P	PWRN1	C22orf24	HAND2-AS1	STX18-AS1	LOC101929532	P2RX6P	MLIP-IT1	LINC00901	SNORD116-2	FAM86HP	LINC00273	PMS2P9	RNF219-AS1	C21orf37	LOC349160	HLA-L	LINC00052	LINC00221	LINC00943	LINC00607	CROCCP2	DNM1P46	HAS2-AS1	CROCCP3	LINC00478	LINC01011	ANKRD20A12P	LINC01446	LINC00900	LOC442028	FAHD2CP	ZNRD1-AS1	RMST	ZRANB2-AS2	WDR16	IFNG-AS1	LOC103171574	LOC283194	NR2F2-AS1	MIR100HG	USP32P1	LINC01115	REG1P	LINC00924	THEG5	SCARNA9	LINC00470	IGF2-AS	FAM66B	USP30-AS1	ANKRD26P1	ANKRD20A5P	C8orf12	RPS10P7	SCAND2P	FLJ35934	RAET1E-AS1	RRP7B	LINCR-0001	ZNF826P	TEX41	SEPT7P2	SLC25A3P1	ABCA17P	RNU5D-1	HCG22	LINC01214	CRYM-AS1	LINC01340	PWAR5	STAG3L5P-PVRIG2P-PILRB	MYT1L-AS1	HOXA-AS3	BDNF-AS	UOX	LINC00841	WT1-AS	C9orf170	RRN3P2	PTPRVP	ZNF37BP	ANKRD19P	MIR10A	C1orf140	DPH6-AS1	LOC102546299	LINC00368	LINC00521	MGC15885	LINC00993	ANKRD20A19P	LINC01428	JAZF1-AS1	ERICH6-AS1	POM121L10P	LINC00954	LZTS1-AS1	TMEM161B-AS1	WHAMMP3	LINC01361	FAM86DP	LINC00482	ATP11AUN	LINC01312	MALAT1	SNORD93	LOC100505782	LOC100505918	DNAJB8-AS1	HIF1A-AS2	KRT42P	MIR124-2HG	FAM86C2P	LINC01393	FAM178A	OTX2-AS1	LINC00977	HOTAIR	LINC00029	THAP7-AS1	HLA-F-AS1	LINC01006	ANKRD62P1-PARP4P3	CCDC144B	MDS2	SLC8A1-AS1	PMCHL2	COLCA1	CASC21	MIR646HG	ELK2AP	FLJ31306	CRAMP1L	FLJ33360	LINC01028	LINC00922	LOC101928336	C17orf104	ZNF252P	PTENP1	FLJ46906	DISC1FP1	LINC00226	LINC01422	LINC01108	SOX21-AS1	FER1L4	USP32P2	HAGLR	BAGE2	LRRC37A6P	ZNF833P	SNORD116-24	DAOA-AS1	BCYRN1	LINC01344	LOC100506071	FAM86B3P	TTC28-AS1	LINC01262	CHEK2P2	LINC00320	LPP-AS2	MIR503HG	MTHFD2P1	LINCR-0002	LINC01013	LINC00882	LINC00499	CIDECP	HCG17	KTN1-AS1	SPATA42	TPTE2P1	LINC00477	LINC00452	MIR663A	LOC100505912	MIR4313	DANCR	GABARAPL3	CTB-7E3.1	LOC102723427	LINC00854	LINC00184	LINC01120	LINC01000	MYH16	FAM86EP	LOC648691	LINC01289	CYP4F30P	GUSBP1	SNRK-AS1	PVRL3-AS1	KIAA0125	LINC-PINT	FLJ36000	C11orf44	ADCY10P1	CMAHP	TMEM72-AS1	ARHGEF26-AS1	APCDD1L-AS1	LINC01182	LINC01237	TUBA3FP	ADAM6	C14orf23	LINC00937	DDX11L1	TPTEP1	RRN3P1	LOC100129316	LINC00534	LINC00645	FAM27L	LINC00202-1	GRM5-AS1	TAPT1-AS1	LINC01452	LINC00442	LOC101928516	EMX2OS	CCDC135	RNF216P1	GUCY1B2	LINC00613	LINC01132	LINC00970	CDRT15P2	LINC01003	KLRAP1	LINC01205	EGFEM1P	ENTPD1-AS1	LINC01057	LOC102724849	SPANXA2-OT1	LINC01333
ESCA;Class:TCGA;Sub_Class:Mutations		STAG3L4	DHRS4L1	C14orf182	TLX1NB	C17orf77	C12orf36	AGAP11	C9orf106	FAM178A	GSTT1	C5orf56	BAGE2	C15orf56	HDGFRP3	C8orf31	CRAMP1L	C3orf35
ESCA-CN;Class:ICGC;Sub_Class:Mutations		SDHAP1	HERC2P4	LINC00477	CIRBP-AS1	GSN-AS1	ANKRD20A5P	FAM66B	ZNF271	ZDHHC8P1	LINC00615	GGT3P	ATXN8OS	VN1R10P	C17orf77	FAM138B	HERC2P9	PTENP1	BDNF-AS	HERC2P2	LRRC37A6P	LINC00862	FAM86B3P	C2orf27A	CROCCP2
GACA-CN;Class:ICGC;Sub_Class:Mutations		LINC01361	XIST	SDHAP1	HERC2P4	CACNA1C-AS1	FAM138D	MST1P2	LOC284788	LINC01005	BCRP2	LOC283683	LOC100288069	TSIX	FAM205B	LOC102724058	LINC00410	GYG2P1	HERC2P3	LINC00382	FAM27L	LINC00342	LOC100508046	HERC2P2	WASH3P	LOC101928782	OR7E156P	FAM86FP	TAPT1-AS1	BAGE2	FLJ46284	SEPT7P9	TPTE2P6	LINC00273	FAM86B3P	FAM87B	DPY19L2P2	LOC101928401	LINC00943	DUXAP8	CASC9	LINC00910	ANKRD18DP	NCF1B	LOC101929572	ANKRD36BP1	ADAMTS9-AS2	FAHD2CP	LOC100506207	OSTCP1	SPANXA2-OT1
GACA-JP;Class:ICGC;Sub_Class:Mutations		LINC01020	GUSBP11	DHRS4L1	GAS5	ITPK1-AS1	LOC100630923	C3orf27	TCL6	SERF2-C15ORF63	HCG9	NKX2-1-AS1	LINC00917	COL18A1-AS1	ANKRD20A11P	TSIX	DPY19L2P1	PIR-FIGF	LINC00634	UCKL1-AS1	C20orf78	LGALS17A	SNORD116-2	LINC00273	STAG3L4	LOC349160	NSUN5P1	LOC100499484	LINC00221	DNM1P46	HLA-L	PCAT19	LINC00478	C20orf166-AS1	CYP4F35P	C16orf3	VPS9D1-AS1	LOC100506207	WDR16	GTF2H2B	CCNYL2	LOC100506474	KIF25-AS1	C8orf37-AS1	THEG5	SCARNA9	ANKRD20A5P	ZDHHC8P1	CDRT7	RRP7B	ALMS1P	FKBP1A-SDCBP2	MCF2L-AS1	PCOLCE-AS1	LINC00276	C9orf106	AGAP11	C8orf49	PLEKHA8P1	SNORA40	DNAH17-AS1	CADM3-AS1	C4B_2	C9orf53	PRMT5-AS1	KC6	KCNQ1OT1	GUSBP3	LZTS1-AS1	MBL1P	LINC00303	SLC22A20	LOC100499484-C9ORF174	MALAT1	PRNT	C15orf32	LINC01310	RUSC1-AS1	LINC00649	ELK2AP	FLJ33360	SNORD57	ARMCX5-GPRASP2	LPAL2	RNU5F-1	ZNF252P	PTENP1	LOC550113	LINC00226	DGCR5	C9orf37	BAGE2	SNORD116-24	DSCR10	USP3-AS1	CHEK2P2	BZRAP1-AS1	LINC00910	TRHDE-AS1	SCARNA21	AOC4P	HCG17	MYCBP2-AS1	NAPSB	SNHG7	ZFAS1	XIST	LINC00477	PPP4R1L	HGC6.3	ZNF192P1	LINC01289	SDHAP3	LINC00337	LINC00173	KIAA0125	ESPNP	C11orf44	CMAHP	ADAM6	ENTPD3-AS1	LOC101929718	RAB9BP1	RRN3P1	SEC1P	LINC00645	BVES-AS1	FAM27L	PRSS3P2	GRM5-AS1	RBPMS-AS1	LINC00648	CCDC135	LINC00174	DPY19L2P2	DPP9-AS1	KLRAP1	LINC01205	TTN-AS1	HMGN3-AS1	ST7-AS2
GBM;Class:TCGA;Sub_Class:Mutations		SLC22A20	C14orf182	C1orf104	C16orf53	KIAA1012	PGCP	C17orf77	C22orf24	FAM178A	SOLH	C16orf3	C12orf52	PLK1S1
GBM-US;Class:ICGC;Sub_Class:Mutations		SLC22A20	SPATA31C1	NBEAP1	UXT-AS1	LOC100499484-C9ORF174	MST1L	LINC01168	FAM86DP	TRG-AS1	MAGEA10-MAGEA5	MIR4313	IL21-AS1	FAM178A	C15orf32	ANKRD20A5P	NSUN5P2	ZNF271	SDHAP3	PI4KAP2	KIAA0125	RUSC1-AS1	DPY19L2P1	ESPNP	COLCA1	MIR34A	ADAM6	ELK2AP	C9orf163	ARMCX5-GPRASP2	HERC2P3	C21orf128	C1orf220	LINC00645	FAM27L	C14orf182	STARD7-AS1	LINC00342	LINC00265	LINC00226	PRSS3P2	BCRP3	DDX11L2	LINC00207	WASH3P	C22orf24	HAND2-AS1	ZNF833P	PTGER4P2-CDK2AP2P2	BAGE2	RBPMS-AS1	LINC00862	C9orf139	C7orf65	LINC00273	C7orf66	LOC642846	CCDC135	HLA-L	C2orf27A	LINC00221	C12orf77	C17orf102	POM121L10P	KLRAP1	C1orf200	LOC442028	HLA-J	FAHD2CP	DDX11L16	PVRL2	AOC4P	WDR16	SSX8
GBMLGG;Class:TCGA;Sub_Class:Mutations		SLC22A20	C16orf53	C12orf36	FAM178A	C3orf35	C10orf91	C17orf77	CRAMP1L	KIAA0495	C14orf182	PGCP	C22orf24	GSTT1	C18orf1	SOLH	HDGFRP3	PLK1S1	C12orf44	CCDC135	SLMO2	C5orf55	STAG3L4	C1orf104	KIAA1012	C10orf137	FAM59A	C16orf3	C12orf52	WDR16
HNSC;Class:TCGA;Sub_Class:Mutations		SLC22A20	C16orf53	C1orf213	C3orf27	C12orf36	FAM178A	GOLGA2B	C10orf25	C10orf91	C17orf77	TMCO7	FAM125A	C6orf26	EIF2C3	KIAA0495	C14orf182	PGCP	C9orf106	SOLH	C18orf1	C9orf37	C8orf31	PLK1S1	C1orf103	SLMO2	C5orf55	STAG3L4	KIAA1609	KIAA1012	C10orf137	FAM59A	C16orf3	C12orf52	C4orf6
HNSC-US;Class:ICGC;Sub_Class:Mutations		KIAA0125	LOC100499484	LINC00221	LOC100499484-C9ORF174	HERC2P4	C4B_2	LINC00226	PRSS3P2	TRG-AS1	C17orf77	ADAM6	CHEK2P2	LINC01168	ELK2AP	FAM178A	ARMCX5-GPRASP2	C17orf82	C15orf32	WDR16
KICH;Class:TCGA;Sub_Class:Mutations		C5orf55	C12orf77	C1orf213	KIAA1012	C10orf91	C16orf3
KICH-US;Class:ICGC;Sub_Class:Mutations		KIAA0125	C5orf55	C1orf213	C22orf34	ELK2AP
KIPAN;Class:TCGA;Sub_Class:Mutations		C5orf55	C12orf77	C14orf182	C10orf91	WDR16	C17orf77	C15orf53	FAM178A	GSTT1	C8orf31	C15orf56	C4orf6	C17orf104
KIRC;Class:TCGA;Sub_Class:Mutations		FAM178A	C5orf55	C8orf31	C10orf91
KIRC-US;Class:ICGC;Sub_Class:Mutations		DHRS4L1	GAS5	MST1L	C1orf213	ANKRD20A9P	MRPS31P5	PDXDC2P	TCL6	SERF2-C15ORF63	KU-MEL-3	EMBP1	HCCAT5	TSIX	DPY19L2P1	C10orf91	CTSLP2	LINC00691	C15orf37	MAPKAPK5-AS1	HERC2P9	EPB41L4A-AS1	LINC00471	LINC00837	SNHG5	LINC00265	HAVCR1P1	LINC00862	C7orf66	STAU2-AS1	LINC01395	LOC349160	DNM1P46	LINC00221	LINC01234	CROCCP2	CROCCP3	LINC00478	LSP1P3	LOC442028	MIR22HG	LINC00473	C16orf3	EMR4P	HERC2P4	TPTE2P3	TRG-AS1	LINC00518	USP32P1	REG1P	MST1P2	SCARNA9	WTAPP1	SNORA47	ALMS1P	LOC284837	LINC01410	POM121L9P	MIR31HG	MIR381HG	PLEKHA8P1	ZNF702P	JAZF1-AS1	SLC2A1-AS1	HLA-J	WHAMMP3	SLC22A20	FAM86DP	SDHAP1	MALAT1	LOC100505782	MAGEA10-MAGEA5	ANKRD30BP2	FAM86C2P	FAM178A	PRNT	POLR2J4	RSU1P2	RUSC1-AS1	KRT16P1	ELK2AP	SNORD45C	LINC01257	SRRM2-AS1	FLJ33360	CRAMP1L	C9orf163	ARMCX5-GPRASP2	LPAL2	RNU5F-1	ZNF252P	C17orf104	PTENP1	LY86-AS1	LINC00461	LINC00226	HERC2P2	PI4KAP1	SBDSP1	FAM86FP	NUP210P1	LINC00852	LRRC37A6P	C7orf71	ZNF833P	WASH3P	BAGE2	SNORD73A	AMZ2P1	FAM86B3P	PPBPP2	DSCR10	C2orf27A	CHEK2P2	SPACA6P-AS	PVRL2	FAM92A1P2	LINC00933	LIMD1-AS1	CSAG4	FAM182A	XIST	HOXA11-AS	LINC00674	HGC6.3	TMEM254-AS1	MIR4313	FBXL21	MYH16	TBC1D3P5	LINC01289	SCARNA2	ULK4P2	GUSBP1	KIAA0125	ESPNP	FAM205B	ADAM6	LINC01182	DDX11L1	TPTEP1	RRN3P1	ZNF385D-AS2	PLAC4	FAM27L	PTGER4P2-CDK2AP2P2	C8orf31	LINC00442	HNRNPKP3	RNU11	LINC00958	MIR205HG	PPAPDC1B	DDX11L16	TTN-AS1	C17orf82	LINC01206
KIRP;Class:TCGA;Sub_Class:Mutations		C5orf55	C14orf182	KIAA1609	C17orf77	C9orf106	C15orf53	FAM178A	GSTT1	SOLH	FAM59A	C22orf25	C15orf56	PLAC4	C3orf71	WDR16	C17orf104
KIRP-US;Class:ICGC;Sub_Class:Mutations		NBR2	FAM182A	SPATA31C1	XIST	DHRS4L1	SDHAP1	FAM86DP	RPLP0P2	MST1L	HGC6.3	HERC2P4	ANKRD30BP2	PPP4R1L	FAM86C2P	FAM178A	MRPS31P5	MST1P2	RRN3P3	THAP7-AS1	SDHAP3	C3orf35	KIAA0125	LOC100288069	GGT3P	TSIX	FLJ36000	ESPNP	FAM205B	RPL32P3	LINC00264	LINC01347	ADAM6	C17orf77	TUBA3FP	ELK2AP	C14orf23	CRAMP1L	STAG3L5P-PVRIG2P-PILRB	RRN3P1	ARMCX5-GPRASP2	PLAC4	C17orf104	FAM27L	ANKRD36BP2	C14orf182	LINC00342	LINC00226	PRSS3P2	DDX11L2	FAM86JP	WASH3P	FAM86FP	GSTT1	FAM86HP	BAGE2	PTGER4P2-CDK2AP2P2	C15orf56	TPTE2P6	HMGN2P46	AMZ2P1	FAM86B3P	LOC642846	DPY19L2P2	CROCCP2	CHEK2P2	C15orf53	MIR205HG	DTX2P1-UPK3BP1-PMS2P11	DDX11L16	FAHD2CP	PVRL2	WDR16	CSAG4
LAML-CN;Class:ICGC;Sub_Class:Mutations		ESPNP
LAML-KR;Class:ICGC;Sub_Class:Mutations		NBEAP1	CES5AP1	MST1L	ANKRD20A9P	PDXDC2P	NSUN5P2	LINC00665	ANKRD20A11P	CASC20	NPSR1-AS1	DPY19L2P1	TSIX	CRYBB2P1	CTSLP2	SLX1A-SULT1A3	ST3GAL6-AS1	HERC2P3	LINC00353	LOC100508046	LINC00265	LRRC37A11P	LINC01012	FAM86HP	HMGN2P46	DKFZP434H168	ZFAT-AS1	DNM1P46	CROCCP2	LINC00221	LOC101927881	PCAT19	CROCCP3	RPL13P5	ANKRD20A12P	C20orf166-AS1	LOC642361	ZNF252P-AS1	INTS6-AS1	FAHD2CP	CCNYL2	LINC00964	LOC103171574	C9orf62	PTCHD1-AS	HERC2P4	MST1P2	ANKRD20A5P	SMG1P1	BCRP2	PI4KAP2	SCAND2P	FLJ35934	LINCR-0001	ALMS1P	SNORA59B	LINC00211	LINC01410	POM121L9P	PWAR5	ABCA11P	CTBP1-AS2	SSTR5-AS1	ZNF37BP	ANKRD19P	FAM138F	SNORA59A	AGAP11	PLEKHA8P1	ELDR	RGPD4-AS1	FAM27E3	C4B_2	LINC00623	HLA-DRB6	ASMTL-AS1	MEG3	HLA-J	APOC1P1	LIMS3-LOC440895	WHAMMP3	LINC01361	FAM66E	CASC16	SDHAP1	MALAT1	LINC00869	TTTY23B	LINC00898	LOC100131289	FAM86C2P	RARA-AS1	GOLGA6L7P	MIR4435-1HG	POLR2J4	RPL13AP3	THAP7-AS1	HLA-F-AS1	LOC283683	GGT3P	KRT16P1	LINC01193	ELK2AP	LINC00603	LINC01106	LINC01122	PMS2P5	ZNF252P	MIR7-3HG	LINC00226	SDR16C6P	HERC2P2	WASH3P	PI4KAP1	DDX11L9	BAGE2	FAM99B	RPL23AP7	TPTE2P6	BCYRN1	LINC00506	FAM86B3P	DUXAP8	CHEK2P2	LINC00320	TBC1D3P1-DHX40P1	IDI2-AS1	ZNF733P	FAM92A1P2	SPATA42	CSAG4	FAM230B	XIST	TMEM254-AS1	FAM74A3	MIR4313	FAM86EP	CD81-AS1	CYP4F30P	ULK4P2	GUSBP1	KIAA0125	LINC00152	ESPNP	ADAM6	TUBA3FP	DDX11L1	GYG2P1	LINC00645	FAM27L	ANKRD36BP2	LINC00342	OR7E156P	TAPT1-AS1	ZNF815P	PTGER4P2-CDK2AP2P2	RBPMS-AS1	LINC00559	SLX1B-SULT1A4	HNRNPKP3	FAM87B	GUCY1B2	PPP1R26-AS1	LOC101929420	KLRAP1	LOC101929572	DDX11L16
LGG;Class:TCGA;Sub_Class:Mutations		C16orf53	C12orf36	FAM178A	C3orf35	C10orf91	C17orf77	CRAMP1L	KIAA0495	C14orf182	PGCP	GSTT1	C18orf1	HDGFRP3	C12orf44	CCDC135	SLMO2	C5orf55	STAG3L4	KIAA1012	C10orf137	FAM59A	C12orf52	WDR16
LGG-US;Class:ICGC;Sub_Class:Mutations		SPATA31C1	GUSBP11	MST1L	ANKRD20A9P	MRPS31P5	MIR133B	ANKRD20A11P	TSIX	CRYBB2P1	CTSLP2	LINC01239	HERC2P3	HERC2P9	BTN2A3P	C14orf182	LRRC37A11P	FAM86HP	SNORD115-13	KRT18P55	DEPDC1-AS1	STAG3L4	NSUN5P1	DNM1P46	CROCCP2	LINC00221	FCGR1C	WDR16	RPLP0P2	HERC2P4	TRG-AS1	C12orf36	MST1P2	MIR371B	ANKRD20A5P	LRRC37A5P	C17orf77	FAM86JP	AGAP11	ANKRD18DP	HLA-J	PYY2	WHAMMP3	MALAT1	FAM86C2P	FAM178A	PRNT	C3orf35	GGT3P	KRT16P1	CSNK1A1P1	ELK2AP	MIR146A	CRAMP1L	LINC00922	ARMCX5-GPRASP2	LPAL2	LINC00226	PI4KAP1	FAM86FP	LRRC37A6P	ZNF833P	BAGE2	TPTE2P6	NCF1B	MTHFD2P1	ZNF733P	FAM92A1P2	CSAG4	XIST	LINC00477	LINC00674	FAM74A3	MIR4313	FAM86EP	SDHAP3	ZNF271	KIAA0125	ESPNP	ADAM6	SEC1P	FAM27L	CCDC135	KLRAP1	DDX11L16	C17orf82
LICA-CN;Class:ICGC;Sub_Class:Mutations		SPATA31C1	MST1L	ANKRD20A9P	MRPS31P5	PDXDC2P	CCDC162P	ANKRD20A11P	SNORD116-13	C15orf37	HERC2P3	SNORD116-20	ADAM5	BTN2A3P	C5orf64	STARD7-AS1	LOC100508046	LRRC37A11P	ST8SIA6-AS1	FAM86HP	SNORD115-13	SNORD116-2	DNM1P46	CROCCP2	LINC00221	CROCCP3	RPL13P5	ANKRD20A12P	RP9P	EPHA1-AS1	C20orf166-AS1	DTX2P1-UPK3BP1-PMS2P11	FAHD2CP	WDR16	LINC00669	CCNYL2	ALG1L9P	EMR4P	LOC283177	TRG-AS1	USP32P1	GSN-AS1	IL12A-AS1	REG1P	MST1P2	ANKRD20A5P	MIR137HG	RRP7B	SLC25A3P1	ULK4P1	POM121L9P	LINC01410	STAG3L5P-PVRIG2P-PILRB	SMAD5-AS1	DLEU2	HSFY1P1	LINC00115	C9orf170	FAM86JP	PTPRVP	AGAP11	ZNF571-AS1	LOC642846	LINC00623	SNORD113-4	LINC01242	FAM95B1	ANKRD36BP1	SLC22A20	ATP11AUN	FAM86DP	SDHAP1	MALAT1	LINC00869	TTTY23B	ANKRD30BP2	FAM86C2P	FAM178A	RRN3P3	THAP7-AS1	LINC01169	GGT3P	KRT16P1	COLCA1	NHEG1	CSNK1A1P1	ELK2AP	ARMCX5-GPRASP2	LPAL2	RNU5F-1	PTENP1	LINC00226	SDR16C6P	DGCR5	PI4KAP1	WASH3P	FAM86FP	ULK4P3	USP32P2	BAGE2	LRRC37A6P	TPTE2P6	FAM86B3P	TTC28-AS1	C17orf102	CHEK2P2	SNORD113-2	LINC00910	NCF1B	ZNF733P	FAM92A1P2	GOLGA2P6	LIMD1-AS1	FAM230B	SNHG7	FAM182A	XIST	LINC00674	HGC6.3	MIR4313	FAM74A3	MIR497HG	FAM86EP	TBC1D3P5	ULK4P2	LINC01419	KIAA0125	LINC00200	ESPNP	FAM205B	ADAM3A	MIR34A	ADAM6	TCAM1P	TUBA3FP	MIR519A2	FAM138E	LOC91450	LINC00937	RRN3P1	TPTEP1	GYG2P1	ZNF385D-AS2	LINC00645	FAM27L	ANKRD36BP2	LINC00342	PTGER4P2-CDK2AP2P2	C8orf31	CCDC135	DPY19L2P2	DDX11L16	ENTPD1-AS1
LICA-FR;Class:ICGC;Sub_Class:Mutations		KIAA0125	PTENP1	LINC00221	LINC00378	LINC00226	HERC2P2	C9orf170	ELK2AP	HLA-DRB6	CDIPT-AS1	SNORD116-2	BCYRN1	HERC2P3
LIHC;Class:TCGA;Sub_Class:Mutations		DHRS4L1	C16orf53	C2orf3	C3orf27	C22orf25	C3orf35	C17orf77	CRAMP1L	FAM125A	C18orf34	EIF2C3	PLAC4	C19orf42	PGCP	SOLH	C8orf31	HDGFRP3	C12orf44	CCDC135	C5orf55	C1orf104	KIAA1012	C10orf137	C12orf52
LIHC-US;Class:ICGC;Sub_Class:Mutations		RUSC1-AS1	SLC22A20	DHRS4L1	SPATA31C1	C5orf55	TRG-AS1	C9orf170	C16orf80	AGAP11	C3orf27	BAGE2	C3orf79	C8orf31	C17orf112	PVRL2	CRAMP1L	CCDC135	ARMCX5-GPRASP2	C7orf66	C17orf104
LINC-JP;Class:ICGC;Sub_Class:Mutations		RPL29P2	DHRS4L1	LINC01098	C10orf40	SND1-IT1	RPL23P8	LINC01060	MIR124-2HG	MRPS31P5	MIR133B	ANKRD20A5P	IGF2-AS	LINC01289	LINC01194	PPIEL	C10orf91	RAP2C-AS1	LINC01281	VN1R10P	ADAM6	POM121L9P	FAM27L	ANKRD36BP2	LINC00226	PRSS3P2	HERC2P2	LINC01164	TAPT1-AS1	LOC100507205	BAGE2	PLEKHA8P1	C8orf31	PKN2-AS1	LINC00970	DNM1P46	C12orf77	LINC01262	LINC00467	HLA-DRB6	DTX2P1-UPK3BP1-PMS2P11	HLA-J
LIRI-JP;Class:ICGC;Sub_Class:Mutations		LINC00609	TRG-AS1	MAGEA10-MAGEA5	FAM74A3	LINC00840	IL12A-AS1	GLUD1P3	C3orf79	RPL13AP3	ANKRD62P1-PARP4P3	LINC01193	ESPNP	LOC101928372	ELK2AP	LINC00336	POM121L9P	LINC00536	ARMCX5-GPRASP2	MYT1L-AS1	USP27X-AS1	BMS1P4	LINC00342	LINC00226	LINC00841	LINC00963	BAGE2	NFYC-AS1	CROCCP2	LINC00221	SNORA16A	NCF1B	FAHD2CP	LINC01266
LMS-FR;Class:ICGC;Sub_Class:Mutations		SNORD115-7	LINC00221	LINC00993	ANKRD36BP2	LINC00226	LINC00971	PCAT19	MGC27382	USP32P1	LOC145845	VLDLR-AS1	OTX2-AS1	LOC100289361	LEF1-AS1	SRGAP2-AS1	SEC1P	RPL34-AS1
LUAD;Class:TCGA;Sub_Class:Mutations		SLC22A20	C12orf36	C3orf27	FAM178A	C3orf35	C10orf25	C10orf91	C17orf77	WDR16	CRAMP1L	C14orf182	C9orf106	AGAP11	BAGE2	C8orf31	HDGFRP3	SLMO2	C5orf55	STAG3L4	TLX1NB	C15orf53	C4orf6
LUAD-US;Class:ICGC;Sub_Class:Mutations		LINC01098	LOC100499484-C9ORF174	C1orf213	LINC01168	TRG-AS1	C3orf79	C10orf111	C3orf35	KIAA0125	C10orf25	ADAM6	ELK2AP	ARMCX5-GPRASP2	C17orf104	LINC00342	LINC00226	PRSS3P2	C9orf170	C8orf31	LINC00273	C7orf66	CCDC135	LOC100499484	LINC00221	CHEK2P2	FAHD2CP
LUSC;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	C3orf27	C12orf36	FAM178A	GOLGA2B	CCDC144B	C10orf91	C17orf77	FAM125A	C3orf71	EIF2C3	PLAC4	SOLH	C12orf61	C18orf1	C8orf31	C15orf56	PLK1S1	C1orf103	SLMO2	STAG3L4	C12orf77	C1orf104	KIAA1012	C10orf137	FAM59A
LUSC-KR;Class:ICGC;Sub_Class:Mutations		NBEAP1	HCG9	LINC01061	LINC00691	C10orf85	LPHN3-AS1	LINC00265	LINC00971	LINC00348	PCGEM1	DNM1P46	LINC00221	HAS2-AS1	ANKRD20A12P	C20orf166-AS1	LOC103171574	FAM41C	HERC2P4	IL12A-AS1	REG1P	LINC00957	ANKRD20A5P	POM121L9P	LINC01410	STAG3L5P-PVRIG2P-PILRB	FAM27C	DLEU2	BDNF-AS	FAM86JP	AGAP11	HLA-DRB6	HLA-J	LZTS1-AS1	FAM86DP	SDHAP1	MALAT1	TTTY23B	ANKRD30BP2	FAM86C2P	C15orf32	THAP7-AS1	LOC283683	FAM157B	LOC101928372	NR2F1-AS1	ELK2AP	DHRS4-AS1	LINC00226	HERC2P2	LRRC37A6P	BAGE2	TPTE2P6	LINC00506	DPPA2P3	DUXAP8	ATP1A1-AS1	CHEK2P2	SPACA6P-AS	LINC00910	CIDECP	LINC00674	PPP4R1L	LINC00906	LINC00854	FAM86EP	LOC648691	TBC1D3P5	PVRL3-AS1	KIAA0125	ATXN8OS	FAM205B	ADAM6	LOC100128885	TUBA3FP	RAB9BP1	LINC00645	SNORD115-7	FAM27L	OR7E156P	TAPT1-AS1	LOC101927827	CCDC135	LINC00613	ARRDC3-AS1	LINC01002	DDX11L16	LINC01205	LINC00624
LUSC-US;Class:ICGC;Sub_Class:Mutations		SNORD116-1	DHRS4L1	LINC01168	C3orf27	ANKRD20A9P	C10orf111	TCL6	LOC100288069	HCCAT5	VENTXP7	TSIX	LINC00847	C10orf91	CTSLP2	C15orf37	LINC00336	C1QTNF9B-AS1	LINC00202-2	HERC2P3	BTN2A3P	STARD7-AS1	LINC00471	DSCR4	LINC00207	HAND2-AS1	LOC101928525	KRT18P55	C15orf56	LINC00862	LINC00273	HMGN2P46	MIR490	LINC01278	C7orf66	DEPDC1-AS1	SLMO2	STAG3L4	DNM1P46	LINC00221	LINC00478	SNORA34	C20orf166-AS1	LOC100506207	WDR16	RAB6C-AS1	LINC01098	HOXA10-AS	TRG-AS1	C12orf36	ANKRD20A5P	IGF2-AS	VTRNA2-1	DNAJC27-AS1	VN1R10P	C17orf77	CRYM-AS1	LINC01410	ZNF137P	C21orf128	WT1-AS	C9orf170	LINC00839	ZNF37BP	MIR10A	PLEKHA8P1	C7orf65	LINC00521	MIPEPP3	C4B_2	EPHA5-AS1	SLC22A20	LINC00482	MALAT1	PMS2P3	FAM178A	PRNT	C15orf32	HLA-F-AS1	ANKRD62P1-PARP4P3	RUSC1-AS1	MDS2	CCDC144B	MIR646HG	ELK2AP	FLJ33360	CRAMP1L	ARMCX5-GPRASP2	C17orf104	PTENP1	LINC00226	C12orf61	BAGE2	LINC00539	DSCR9	LINC00656	C12orf77	C17orf102	C1orf200	IDI2-AS1	PVRL2	SSX8	XIST	LINC00674	LINC00880	FAM74A3	LINC00969	FBXL21	C5orf56	ZNF271	KIAA0125	MIR328	LINC01347	ADAM6	TERC	SNORA9	C1orf220	PLAC4	FAM27L	LOC101927237	PRSS3P2	C8orf31	CCDC135	C15orf53	KLRAP1	C17orf82	EHHADH-AS1	SPANXA2-OT1	SEC24B-AS1	C3orf65
MALY-DE;Class:ICGC;Sub_Class:Mutations		XIST	TRIM52-AS1	B4GALT1-AS1	IL12A-AS1	MRPS31P5	NALCN-AS1	PDXDC2P	LOC100507053	LINC01005	GUSBP1	NPSR1-AS1	KIAA0125	SLC8A1-AS1	DPY19L2P1	ADAM6	C17orf77	ELK2AP	POM121L9P	ARMCX5-GPRASP2	BDNF-AS	VENTXP1	LOC102724421	LINC00226	LOC101927948	LOC339298	DSCR10	STXBP5-AS1	LINC00221	CHEK2P2	KLRAP1	LINC00900	LOC101928009	MIR142
MELA-AU;Class:ICGC;Sub_Class:Mutations		SPATA31C1	MST1L	LINC01168	LINC01060	TCL6	SNORD116-13	TSIX	LINC00639	HERC2P3	LINC00971	SNORD115-13	SNORD116-2	LINC00273	PMS2P9	NSUN5P1	LINC00221	CROCCP2	LINC00478	ANKRD20A12P	C20orf166-AS1	LOC442028	FAHD2CP	EMR4P	HERC2P4	TRG-AS1	USP32P1	IL12A-AS1	REG1P	MST1P2	CDRT7	RPL32P3	SNORA17	C17orf77	ALMS1P	PWAR5	SNORD116-27	AGAP11	PABPC5-AS1	SNHG24	DLX6-AS1	LOC644554	MEG3	HLA-J	MBL1P	LIMS3-LOC440895	FLJ34503	SLC22A20	FAM86DP	SDHAP1	MALAT1	LOC100505782	PRKY	RSU1P2	GGT3P	LINC00408	PMCHL2	ELK2AP	LOC101928336	LINC01106	ARMCX5-GPRASP2	LINC00226	DGCR5	LOC100287792	LRRC37A6P	BAGE2	ZNF833P	C20orf197	PWARSN	DPPA2P3	LINC01262	CHEK2P2	NPPA-AS1	LINC00354	PVRL2	ZNF733P	FAM92A1P2	CSAG4	SNHG7	XIST	MIR4313	SNORD116-14	FAM86EP	CD81-AS1	KIAA0125	ESPNP	ADAM6	LINC01260	ZSCAN12P1	RAB9BP1	LINC00645	FAM27L	SNORD115-7	ANKRD36BP2	LINC00342	PRSS3P2	RBPMS-AS1	SNORD114-21	CCDC135	DPY19L2P2	HNRNPA1P33	VSTM2A-OT1	SUGT1P3
NBL-US;Class:ICGC;Sub_Class:Mutations		MRPS31P5	BAGE2
NKTL-SG;Class:ICGC;Sub_Class:Mutations		C3orf79	ARHGEF26-AS1	ZNF137P
ORCA-IN;Class:ICGC;Sub_Class:Mutations		LINC00970	C22orf34	FAM86C2P	C7orf66	PLAC4
OV;Class:TCGA;Sub_Class:Mutations		C1orf104	KIAA1012	C10orf137	C3orf27	AGAP11	C9orf106	FLJ37543	GSTT1	TMCO7	C8orf31	PLK1S1	C18orf34
OV-AU;Class:ICGC;Sub_Class:Mutations		LINC00221	STAG3L1	PCAT19	ANKRD30BP2	LINC01446	HMGN2P46
OV-US;Class:ICGC;Sub_Class:Mutations		SPATA31C1	CES5AP1	LINC01443	RFPL1S	LINC01192	KU-MEL-3	ANKRD20A11P	CASC20	HCCAT5	DPY19L2P1	TMPRSS11GP	CTSLP2	ST3GAL6-AS1	LPHN3-AS1	LINC01375	HERC2P3	SNORD116-20	DSCR4	SNORA13	DEPDC1-AS1	SNORD116-2	LINC00575	KRT18P55	LINC00273	LINC00622	C7orf66	DNM1P46	LINC00221	FCGR1C	CYP4F35P	LOC642361	LOC100506207	GNG12-AS1	LINC00669	CCNYL2	EMR4P	RPLP0P2	LINC01087	REG1P	SCARNA9	CDRT7	TTC3P1	ALMS1P	LINC01410	ABCA11P	CTBP1-AS2	PABPC5-AS1	LOC102546299	LOC646903	LINC01213	LINC01242	LOC101927450	FAM86DP	SDHAP1	MALAT1	LINC00997	RRN3P3	THAP7-AS1	LINC01343	MDS2	PMCHL2	LOC101928372	ELK2AP	LINC00603	ARMCX5-GPRASP2	LINC01106	LINC01122	RNU5F-1	ABCC6P1	LINC00226	PI4KAP1	LRRC37A6P	ZNF833P	C2orf27A	DUXAP8	CHEK2P2	NCF1B	ZNF733P	C5orf66	CSAG4	CTB-7E3.1	MIR4313	RNVU1-19	FTX	LINC01000	KIAA0125	ESPNP	CEP83-AS1	ADAM6	LOC100128885	TUBA3FP	LINC01220	RRN3P1	LINC00222	LINC00442	C8orf31	C17orf112	LOC101927827	LINC01003	KLRAP1	SEC24B-AS1	TEX36-AS1
PAAD;Class:TCGA;Sub_Class:Mutations		SLMO2	DHRS4L1	C10orf91	C17orf77	C3orf27	AGAP11	C9orf106	FAM178A	BAGE2	C8orf31
PACA-AU;Class:ICGC;Sub_Class:Mutations		NR2F2-AS1	XIST	LINC01443	MEF2C-AS1	HERC2P4	MAGEA10-MAGEA5	LINC00538	LINC01060	LINC00924	FRMPD3-AS1	RPL13AP3	MEG8	ANKRD20A5P	SRGAP2-AS1	PI4KAP2	KIAA0125	EMBP1	ESPNP	TSIX	LOC100130476	H19	ELK2AP	MIR143HG	LINC01410	SNORD113-1	HERC2P3	ABCC6P1	LINC00645	LOC101927497	LINC00944	ANKRD36BP2	LOC550113	PRSS3P2	RRN3P2	FAM86HP	BAGE2	PABPC5-AS1	LINC00901	DEPDC1-AS1	LINC00862	LINC01341	LINC01184	LINC01262	CHEK2P2	CROCCP3	USP2-AS1	ANKRD20A12P	FAM157A	C20orf166-AS1	HLA-DRB6	LINC01205	LOC442028	GOLGA2P6	NAPA-AS1	FAM230B
PACA-CA;Class:ICGC;Sub_Class:Mutations		XIST	MIR100HG	ITPK1-AS1	INE1	IL12A-AS1	GOLGA6L7P	LINC00957	THEG5	ANKRD26P1	TCL6	OR7E47P	SMG1P1	THAP7-AS1	CCDC162P	LINC01310	KIAA0125	RSU1P2	GGT3P	TSIX	ESPNP	FLJ36000	DPY19L2P1	FAM157B	ELK2AP	TUBA3FP	LINC01088	MIR146A	SNHG1	PIN1P1	FAM66D	LINC00922	HERC2P3	ZNF385D-AS2	FAM27L	DISC1FP1	LINC00226	PRSS3P2	TAPT1-AS1	LOC100507205	BAGE2	PLEKHA8P1	C8orf31	TPTE2P6	CTC-338M12.4	DNM1P46	DPPA2P3	LINC01262	LINC00221	DUXAP8	CROCCP2	CTC-360P9.3	USP2-AS1	TBC1D3P1-DHX40P1	LINC00907	DTX2P1-UPK3BP1-PMS2P11	ADAMTS9-AS2	ADARB2-AS1	LINC00618	NAPA-AS1	LINC01432
PAEN-AU;Class:ICGC;Sub_Class:Mutations		XIST	TSIX	FAM86FP	REG1P	MIR371B	SNHG1	LINC00470
PAEN-IT;Class:ICGC;Sub_Class:Mutations		NBPF18P	ANKRD20A19P	FTX	FAM86EP	GDNF-AS1	C17orf104
PBCA-DE;Class:ICGC;Sub_Class:Mutations		C14orf64	GUSBP11	RPL23P8	C3orf79	LOC101928438	SRGAP2-AS1	LINC00989	NPSR1-AS1	EMBP1	LOC100288069	LINC00615	LINC01142	CRYBB2P1	LINC01250	CBR3-AS1	LOC101927358	MRPL45P2	LINC00261	AADACL2-AS1	LINC01254	DLEU2L	STXBP5-AS1	DNM1P46	LINC01265	ANKRD20A12P	LINC01350	RMST	ZRANB2-AS2	WDR16	LINC01266	LOC103171574	FAM41C	HERC2P4	TRG-AS1	LINC00535	LOC284788	LINC00470	LINC01102	LINC01425	ZNF826P	TEX41	SLC25A3P1	LINC00536	MIR1471	LINC01258	CTBP1-AS2	LINC01222	CASC2	LOC101928495	ANKRD19P	DPH6-AS1	KLF3-AS1	LINC01359	LOC102546299	LOC339298	LOC646903	RGPD4-AS1	LINC01213	HLA-DRB6	LINC00158	HLA-J	FAM86DP	SDHAP1	TRIM52-AS1	ANKRD30BP2	LINC01393	OTX2-AS1	POLR2J4	LINC01006	ANKRD62P1-PARP4P3	CCDC144B	LINC00626	GGT3P	KRT16P1	LOC101928372	FLJ33360	LINC01197	LINC01028	LINC00922	LIPE-AS1	LOC101926964	LINC01122	LOC102724421	LINC01422	CASC17	HERC2P2	LINC01246	PCAT4	LINC01247	BAGE2	LMCD1-AS1	OSMR-AS1	TPTE2P6	PWARSN	LINC01262	LINC00457	NCF1B	LOC101927964	LINC00933	XIST	HGC6.3	LOC100505912	NALCN-AS1	LOC101927394	FLJ41278	SDHAP3	ADAM3A	LINC01347	ARHGEF26-AS1	C14orf23	FAM66D	TPTEP1	CASC6	LOC101927571	FAM27L	PGM5-AS1	LOC101927769	LINC01138	PCBP1-AS1	FAM87B	LINC00613	PTPRD-AS2	C15orf53	LINC00936	HOTAIR	LINC01184
PBCA-US;Class:ICGC;Sub_Class:Mutations		FAM182A	FAM13A-AS1	CES5AP1	SDHAP1	HERC2P4	MST1L	LOC100130964	MIR4313	FAM86C2P	MST1P2	LINC00470	LRRC37A5P	SDHAP3	LOC100506990	ANKRD20A11P	KIAA0125	GGT3P	SNORD7	ESPNP	LOC100506023	ADAM3A	ADAM6	CD27-AS1	LOC101929413	ELK2AP	C9orf163	LOC729732	HERC2P3	FAM27C	RAET1K	PLAC4	ABCA11P	LINC00342	LINC00226	LINC00971	WASH3P	C16orf80	AGAP11	USP32P2	FAM86HP	LINC00987	RBPMS-AS1	BAGE2	FAM90A2P	LINC00575	LINC00273	LOC101927827	FAM86B3P	STAG3L4	ZNF503-AS1	CROCCP2	DUXAP8	HOXC-AS3	ANKRD20A12P	ANKRD18DP	FAM157A	FAHD2CP	LINC01356
PCPG;Class:TCGA;Sub_Class:Mutations		C10orf91	CRAMP1L
PEME-CA;Class:ICGC;Sub_Class:Mutations		LINC01361	LINC01020	FAM86DP	TRIM52-AS1	LINC00588	MEF2C-AS1	PTCHD1-AS	CACNA1C-AS1	MST1L	ANKRD30BP2	LINC00266-1	USP32P1	C8orf37-AS1	BLACE	THEG5	LOC101928438	PDXDC2P	LINC00665	NPSR1-AS1	KIAA0125	LINC00200	LOC100288069	GS1-600G8.3	LINC01419	GDNF-AS1	FLJ36000	LOC646762	TEX41	FAM157B	MIR646HG	ADAM6	LINC01019	LINC00499	ELK2AP	MIR143HG	LINC00534	HERC2P3	LINC00314	LINC01122	LINC00602	D21S2088E	ANKRD36BP2	DISC1FP1	RRN3P2	FAM86JP	LINC01246	LINC01247	BAGE2	C21orf49	TMEM220-AS1	LINC00879	TMCC1-AS1	LINC00613	ZNF503-AS1	LINC01184	DNM1P46	LINC00221	LINC01262	SNAP25-AS1	CHEK2P2	NPHP3-AS1	LINC01282	ZSCAN16-AS1	CROCCP3	CTC-360P9.3	ANKRD20A12P	PWRN2	HLA-DRB6	ADAMTS9-AS2	LINC00473	LYPLAL1-AS1	KTN1-AS1	LINC01266	FAM230B
PRAD;Class:TCGA;Sub_Class:Mutations		SLMO2	STAG3L4	GSTT1	C10orf91	KIAA1012	PGCP	SOLH	C3orf27	FAM178A	C9orf37	C18orf1	FAM59A	GOLGA2B	C15orf56	C16orf3	C12orf52	CRAMP1L	C18orf34	KIAA0495
PRAD-CA;Class:ICGC;Sub_Class:Mutations		FAM13A-AS1	LOC283177	MALAT1	PCAT18	C8orf37-AS1	GOLGA6L7P	FAM66B	KIAA0125	LOC100288069	LOC101929268	C11orf44	ABCA17P	ELK2AP	POM121L9P	LINC01410	FAM66D	HERC2P3	SEC1P	LPAL2	LINC01122	CHODL-AS1	ANKRD36BP2	C4orf6	FAM86JP	C22orf24	BAGE2	PTGER4P2-CDK2AP2P2	LINC00648	DPY19L2P2	CROCCP2	CHEK2P2	LINC01159	LOC101927314	MKNK1-AS1	C15orf53	RMST	WDR16
PRAD-CN;Class:ICGC;Sub_Class:Mutations		PTENP1	LOC286083	LINC00226	CROCCP3	ADAM6	LINC01410	SPANXA2-OT1
PRAD-FR;Class:ICGC;Sub_Class:Mutations		LINC00152	SDHAP1	MST1L	LINC00623	LINC00869	MALAT1	TPTE2P6
PRAD-UK;Class:ICGC;Sub_Class:Mutations		PWARSN	DHRS4L1	ANKRD36BP2	SDHAP1	DNM1P46	LINC01262	MALAT1	PRSS3P2	FAM74A3	WASH3P	ZNF733P
PRAD-US;Class:ICGC;Sub_Class:Mutations		SPATA31C1	GUSBP11	NBEAP1	MST1L	JHDM1D-AS1	MRPS31P5	PDXDC2P	NIFK-AS1	C3orf79	NSUN5P2	MLLT4-AS1	ANKRD20A11P	TMLHE-AS1	DPY19L2P1	RAMP2-AS1	ZBED5-AS1	LINC00558	C10orf91	TSIX	HAR1A	LINC00336	HERC2P3	HERC2P9	LOC400553	LOC101927497	BTN2A3P	STAG3L1	LINC00471	LINC00971	GSTT1	FAM86HP	MIRLET7DHG	C15orf56	LINC01141	LINC00273	SLMO2	NSUN5P1	HLA-L	DNM1P46	LINC00221	CROCCP2	STAG3L4	CROCCP3	LINC00478	ANKRD20A12P	C20orf166-AS1	FAHD2CP	C16orf3	LOC100506207	LINC00669	LOC103171574	LINC01098	LINC01029	HERC2P4	TRG-AS1	LINC00518	IL12A-AS1	REG1P	MST1P2	LINC00957	ANKRD20A5P	LINC00628	RRP7B	MIR4500HG	ALMS1P	HCG22	CRYM-AS1	LINC01340	POM121L9P	LINC01410	WT1-AS	MIR381HG	AFG3L1P	RRN3P2	C16orf80	AGAP11	ANKRD19P	TTTY16	LOC102546299	SNHG24	LINC00521	MIPEPP3	ZNF702P	DGCR10	HLA-DRB6	HLA-J	LINC01158	MBL1P	TTTY12	CYP1B1-AS1	WHAMMP3	SNORD114-20	SLC22A20	FAM86DP	SDHAP1	TRIM52-AS1	MALAT1	LOC100505782	TTTY23B	PMS2P3	FAM86C2P	OTX2-AS1	POLR2J4	HLA-F-AS1	LOC283683	LINC01343	ANKRD62P1-PARP4P3	RSU1P2	CCDC144B	GGT3P	MIR646HG	ELK2AP	CRAMP1L	ARMCX5-GPRASP2	LINC00461	CCT6P1	LINC00226	DGCR5	LINC01422	HERC2P2	WASH3P	FAM86FP	GLUD1P7	USP32P2	LRRC37A6P	BAGE2	TPTE2P6	AMZ2P1	FAM86B3P	UBE2E1-AS1	C12orf77	DUXAP8	CHEK2P2	UBE2Q2P2	TBC1D3P1-DHX40P1	NCF1B	SERHL	AOC4P	LINC00882	LINC00871	LINC00933	CSAG4	XIST	JRKL-AS1	LINC00674	FAM74A3	MIR4313	FAM86EP	CD81-AS1	TBC1D3P5	KIAA0125	GNAS-AS1	LINC00264	ADAM6	FAM66D	TPTEP1	CASC6	ZNF385D-AS2	LINC00475	C1orf220	CTD-2194D22.4	D21S2088E	LINC00645	FAM27L	ANKRD36BP2	BMS1P4	LINC00202-1	LINC00342	VENTXP1	PRSS3P2	RBPMS-AS1	MIR663AHG	LINC01056	EMX2OS	CCDC135	LINC00174	DPY19L2P2	HNRNPA1P33	TLX1NB	KLRAP1	DDX11L16	CBX3P2	LINC00308	LOC100129620
READ;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	FAM178A	FBXL21	C22orf25	C3orf35	CCDC144B	FAM125A	KIAA0495	PGCP	AGAP11	C8orf31	HDGFRP3	C15orf56	PLK1S1	C1orf103	C1orf104	KIAA1609	TLX1NB	FAM59A	C16orf3	C12orf52
READ-US;Class:ICGC;Sub_Class:Mutations		DHRS4L1	LINC00221	LINC00342	HDGFRP3	LINC00226	TLX1NB	C16orf80	FAM178A	C10orf111	FAHD2CP	C15orf56	ARMCX5-GPRASP2	C7orf66	CCDC135
RECA-EU;Class:ICGC;Sub_Class:Mutations		DPY19L2P2	CROCCP2	ATXN8OS	PVRL2	LINC00342	FAM92A1P2	ALMS1P	DDX11L16	LOC101928438	BAGE2	LINC01410	ZNF733P	AOC4P	FAHD2CP	HERC2P3	LOC283683
RT-US;Class:ICGC;Sub_Class:Mutations		PMS2P5
SARC;Class:TCGA;Sub_Class:Mutations		C14orf182	C3orf27	HDGFRP3
SARC-US;Class:ICGC;Sub_Class:Mutations		TRPM2-AS	C3orf79	LINC01105	LINC01430	LOC101928618
SKCA-BR;Class:ICGC;Sub_Class:Mutations		MAPT-AS1	TCL6	ANKRD20A11P	FAM138B	LPHN3-AS1	LINC00639	HERC2P3	C14orf182	STARD7-AS1	GUSBP9	DSCR4	LOC100508046	LRRC37A11P	MIAT	KRT18P55	LINC00221	CROCCP2	CROCCP3	ANKRD20A12P	SDCBP2-AS1	WDR16	EMR4P	TRG-AS1	LINC00266-1	USP32P1	IL12A-AS1	LOC100287846	BCRP2	RRP7B	LINC01088	TMED11P	LINC01410	FKBP1A-SDCBP2	ABCA11P	PMCHL1	LINC00293	PLEKHA8P1	LOC102546299	MIR206	ZNF702P	SNORD113-4	FAM157A	HLA-DRB6	MBL1P	LINC01010	SDHAP1	MALAT1	ANKRD30BP2	MAGEA10-MAGEA5	GOLGA6L7P	C15orf32	RSU1P2	GGT3P	PMCHL2	ELK2AP	CRAMP1L	LINC00922	LINC00226	WASH3P	DDX11L9	BAGE2	SNORD116-24	C20orf197	LINC00928	PWARSN	DUXAP8	CHEK2P2	NCF1B	TBC1D3P1-DHX40P1	CIDECP	CSAG4	FAM230B	XIST	LINC00477	FTX	LOC648691	TBC1D3P5	KIAA0125	ESPNP	LINC01347	ADAM6	RAB9BP1	TPTEP1	LINC00645	FAM27L	PRSS3P2	OR7E156P	LINC01001	RBPMS-AS1	LINC01138	HNRNPKP3	GUCY1B2	DDX11L16	MATN1-AS1
SKCM;Class:TCGA;Sub_Class:Mutations		DHRS4L1	C16orf53	C1orf213	CCDC55	C3orf27	C12orf36	FAM178A	C22orf25	GOLGA2B	C3orf35	C10orf25	C17orf77	TMCO7	CRAMP1L	FAM125A	C3orf71	C18orf34	EIF2C3	KIAA0495	C17orf104	C14orf182	PGCP	C9orf106	AGAP11	FLJ37543	GSTT1	C9orf37	C18orf1	SOLH	C8orf31	HDGFRP3	PLK1S1	C1orf103	C12orf44	CCDC135	SLMO2	C5orf55	KIAA1012	C10orf137	FAM59A	C12orf52
SKCM-US;Class:ICGC;Sub_Class:Mutations		SAA3P	SNORD116-1	SPATA31C1	NBEAP1	GUSBP11	DHRS4L1	MST1L	LINC01168	AGAP2-AS1	C3orf27	ANKRD20A9P	MRPS31P5	PDXDC2P	C10orf111	C3orf79	TCL6	KU-MEL-3	TYMSOS	SERF2-C15ORF63	ANKRD20A11P	RASA4CP	HCCAT5	TSIX	DPY19L2P1	CRYBB2P1	CTSLP2	CD27-AS1	LINC01239	C15orf37	LINC00336	C1QTNF9B-AS1	LINC00202-2	LINC00639	HERC2P3	SNORD27	RAET1K	MRPL45P2	LOC100131496	HERC2P9	BTN2A3P	C5orf64	STAG3L1	LINC00471	DSCR4	CD99P1	LRRC37A11P	LINC00207	C22orf24	GSTT1	FAM86HP	SNORD115-13	DEPDC1-AS1	KRT18P55	HDGFRP3	BACH1-IT2	LINC00273	PMS2P9	HMGN2P46	C7orf66	SLMO2	NSUN5P1	DNM1P46	LINC00221	CROCCP2	MT1DP	CROCCP3	LINC00478	C20orf166-AS1	FCGR1C	LOC442028	FAHD2CP	INTS6-AS1	LOC100506207	WDR16	RAB6C-AS1	CCNYL2	KRTAP5-AS1	ZNF890P	LINC01098	FAM41C	HERC2P4	RPLP0P2	TRG-AS1	LINC00518	EMR4P	LOC283194	SNORD115-26	C12orf36	SNORA7B	REG1P	MIR371B	ANKRD20A5P	LRRC37A5P	WTAPP1	VTRNA2-1	ZDHHC8P1	TM4SF19-AS1	RRP7B	ZNF826P	SNORD109A	SNORA71B	RPL32P3	C17orf77	ABCA17P	SEPT7P2	CRYM-AS1	POM121L9P	STAG3L5P-PVRIG2P-PILRB	MIR31HG	ABCA11P	C21orf128	MCF2L-AS1	HSFY1P1	WT1-AS	C9orf170	RRN3P2	FAM86JP	C9orf106	AGAP11	ANKRD19P	C16orf80	ZNF37BP	PLEKHA8P1	UBE2Q2P1	LOC102546299	C7orf65	MIR206	ZNF702P	C5orf55	C4B_2	HLA-J	MBL1P	HCG27	WHAMMP3	LINC00303	SLC22A20	SNORD114-20	ATP11AUN	SDHAP1	FAM86DP	MALAT1	LOC100505782	CLLU1	ANKRD30BP2	MAGEA10-MAGEA5	PMS2P3	PRKY	SNORD1C	FAM86C2P	FAM178A	GOLGA6L7P	PRNT	POLR2J4	RPL13AP3	C15orf32	THAP7-AS1	LOC283683	C3orf35	RSU1P2	C10orf25	GGT3P	KRT16P1	CSNK1A1P1	ELK2AP	C7orf69	FLJ33360	CRAMP1L	C9orf163	MIR182	LINC00922	ARMCX5-GPRASP2	LPAL2	ABCC6P1	C17orf104	NBPF18P	PTENP1	LINC00226	DGCR5	HERC2P2	PI4KAP1	NUP210P1	WASH3P	FAM86FP	LRRC37A6P	C9orf37	BAGE2	ZNF833P	LMF1-AS1	TPTE2P6	C9orf139	AMZ2P1	DSCR9	LOC100506071	C20orf197	PPBPP2	DSCR10	C12orf77	C17orf102	DUXAP8	CHEK2P2	NCF1B	TBC1D3P1-DHX40P1	C1orf200	MTHFD2P1	CATSPER2P1	LRRC75A-AS1	PVRL2	AOC4P	FAM92A1P2	GOLGA2P6	OSTCP1	ZNF733P	CSAG4	FAM230B	TPTE2P1	XIST	SNHG12	LINC00477	LINC00674	GABARAPL3	MIR4313	FAM74A3	TP73-AS1	FAM86EP	TBC1D3P5	CYP4F30P	SDHAP3	ZNF271	GUSBP1	LINC00173	KIAA0125	ESPNP	FLJ36000	LINC00661	LINC00264	ADAM6	TUBA3FP	MIR519A2	MIR143HG	RAB9BP1	TPTEP1	RRN3P1	SEC1P	FAM27L	ANKRD36BP2	LINC00342	PRSS3P2	MIR194-2	OR7E156P	HCP5	ZNF815P	C8orf31	HNRNPKP3	SNORD114-21	LINC00174	CCDC135	DPY19L2P2	TTTY11	TLX1NB	C15orf53	KLRAP1	MIR205HG	PPAPDC1B	DDX11L16	C17orf82	SPANXA2-OT1	SEC24B-AS1	C3orf65
STAD;Class:TCGA;Sub_Class:Mutations		DHRS4L1	C16orf53	C1orf213	C2orf3	C12orf36	C3orf27	FAM178A	C22orf25	GOLGA2B	C10orf25	C17orf77	CRAMP1L	FAM125A	C12orf52	C3orf71	EIF2C3	KIAA0495	PGCP	C16orf80	C9orf106	C22orf24	FLJ37543	C18orf1	DOM3Z	BAGE2	C16orf3	C8orf31	C15orf56	HDGFRP3	PLK1S1	C1orf103	C12orf44	SOLH	SLMO2	STAG3L4	C1orf104	KIAA1609	KIAA1012	C10orf137	C15orf53	FAM59A	KIAA0284	C14orf50	PVRL2	C16orf63	C4orf6
STAD-US;Class:ICGC;Sub_Class:Mutations		DISC2	SLC22A20	DHRS4L1	LOC100499484-C9ORF174	LINC01168	MAGEA10-MAGEA5	C3orf27	GOLGA2P6	FAM178A	RNVU1-19	C3orf79	FBXL21	C10orf111	C5orf56	C15orf32	KU-MEL-3	KIAA0125	RUSC1-AS1	C10orf25	VN1R10P	C17orf77	ADAM6	WDR16	C1QTNF9B-AS1	CRAMP1L	C9orf163	STAG3L5P-PVRIG2P-PILRB	ARMCX5-GPRASP2	C17orf104	C5orf64	FAM27L	STAG3L1	PAXIP1OS	PCOLCE-AS1	SH3BP5-AS1	DSCR4	LINC00226	STARD7-AS1	C9orf170	C4orf6	C21orf67	C16orf80	AGAP11	C22orf24	C9orf106	BACE1-AS	BAGE2	PLEKHA8P1	C8orf31	C15orf56	HDGFRP3	C9orf139	C7orf65	LINC00862	PLCG1-AS1	CCDC135	SLMO2	STAG3L4	LOC100499484	C12orf77	C20orf197	C17orf102	C4B_2	TLX1NB	PRICKLE2-AS3	FCGR1C	C15orf53	C1orf200	PPAPDC1B	C17orf82	C16orf3	PVRL2	C5orf66	SPANXA2-OT1	ADIPOQ-AS1
STES;Class:TCGA;Sub_Class:Mutations		DHRS4L1	C12orf36	C3orf27	FAM178A	C5orf56	C3orf35	C10orf25	C17orf77	CRAMP1L	C14orf182	C9orf106	AGAP11	C22orf24	GSTT1	BAGE2	C8orf31	HDGFRP3	C15orf56	SLMO2	STAG3L4	TLX1NB	C15orf53	PPAPDC1B	PVRL2	C4orf6
TGCT;Class:TCGA;Sub_Class:Mutations		CCDC144B	C1orf104	C16orf53	C12orf36	C22orf25	C15orf56	C12orf52	C3orf71
THCA-CN;Class:ICGC;Sub_Class:Mutations		SPATA31C1	LINC00221	LINC00342	MST1L	HGC6.3	FAM157B	FAM157A	LINC00960	C22orf24	C1QTNF9B-AS1	MIR205HG	CCDC135	FBXL21	FAHD2CP	RRN3P1	NSUN5P2	PLAC4
THCA-SA;Class:ICGC;Sub_Class:Mutations		CRAMP1L
THCA-US;Class:ICGC;Sub_Class:Mutations		NBEAP1	XIST	LINC01098	C1orf213	MALAT1	TP73-AS1	ANKRD20A11P	KIAA0125	RRP7B	TSIX	ADAM6	LINC01239	C15orf37	RRN3P1	LOC100131496	NBPF18P	LINC00226	WT1-AS	FAM86JP	C9orf106	ANKRD19P	LRRC37A6P	KRT18P55	C20orf197	ZNF702P	STAG3L4	DNM1P46	LINC00221	C4B_2	CHEK2P2
THYM;Class:TCGA;Sub_Class:Mutations		C22orf24	C14orf182	C3orf27
UCEC;Class:TCGA;Sub_Class:Mutations		SLC22A20	DHRS4L1	C1orf213	C2orf3	C3orf27	C12orf36	FAM178A	FBXL21	C22orf25	GOLGA2B	C3orf35	C10orf25	C10orf91	C17orf77	TMCO7	CRAMP1L	C3orf71	EIF2C3	KIAA0495	C17orf104	PLAC4	C14orf182	C19orf42	PGCP	AGAP11	C22orf24	SOLH	C9orf37	C18orf1	C17orf108	C8orf31	C1orf103	SLMO2	C5orf55	STAG3L4	C1orf104	KIAA1012	TLX1NB	C10orf137	C15orf53	FAM59A	KIAA0284	C12orf52	C16orf63
UCEC-US;Class:ICGC;Sub_Class:Mutations		CES5AP1	LINC01168	MIR335	KU-MEL-3	CTSLP2	SNORD89	FAM66C	MIR21	LPHN3-AS1	LINC01375	TRAM2-AS1	LINC00265	LRRC37A11P	PMS2P9	HMGN2P46	SNORD46	NSUN5P1	SBF2-AS1	DNM1P46	LINC00607	LINC00316	MIR133A1HG	LOC100506207	LINC00598	ZNF295-AS1	PTCHD1-AS	HOXA10-AS	LOC100287846	FAM66B	MIR137HG	C17orf77	C21orf128	HSFY1P1	MIR381HG	SNORA59A	C7orf65	LINC00521	LOC642846	SPAG5-AS1	LINC01242	LIMS3-LOC440895	SLC22A20	LINC00482	PMS2P3	C15orf32	THAP7-AS1	LOC283683	C3orf35	RUSC1-AS1	C10orf25	C7orf69	CRAMP1L	LOC729732	LINC00574	ABCC6P1	SPATA8-AS1	C7orf71	LINC00852	LRRC37A6P	LINC01344	AMZ2P1	LOC100506071	C20orf197	SNORA33	DUXAP8	LOC100132077	LRRC75A-AS1	AOC4P	LINC00305	CSAG4	FAM230B	TP73-AS1	MIR202	EVX1-AS	ZNF192P1	C6orf99	LINC00173	LOC100506023	ZRANB2-AS1	ADAM6	CSNK1G2-AS1	TUBA3FP	LINC00423	LOC101929718	TERC	C1orf220	LINC00645	BMS1P4	LMLN-AS1	LINC00442	HNRNPKP3	GUCY1B2	RNU11	TLX1NB	SNORD12B	LINC00570	HMGN3-AS1	ENTPD1-AS1	FAM66A	LINC00242	C10orf91	ARNTL2-AS1	SNORD116-4	C1QTNF9B-AS1	SNORD59A	TMPO-AS1	UCA1	MRPL45P2	C14orf182	LGALS17A	LOC101929563	HAND2-AS1	C22orf24	LINC00548	P2RX6P	LINC00862	LINC00273	MGC45922	SLMO2	LINC00692	LINC00221	ANKRD20A12P	WDR16	CCNYL2	LOC283194	KRTAP5-AS1	LINC01098	HERC2P4	ANKRD20A5P	JPX	PI4KAP2	LINC00211	CTBP1-AS2	RRN3P2	LOC101928782	MIR10A	LINC00293	C16orf80	ANKRD19P	LINC00993	LINC01213	JAZF1-AS1	TBX5-AS1	FAM157A	GAS6-AS1	ANKRD36BP1	NAPA-AS1	SDHAP1	CLLU1	ANKRD30BP2	C21orf88	CCDC144B	LOC101929268	FAM157B	ELK2AP	NNT-AS1	C9orf163	LINC01106	LINC00326	LINC00226	CASC17	NUP210P1	FAM86FP	C9orf37	LINC00540	FAM86B3P	C12orf77	USP3-AS1	CHEK2P2	DNM3OS	SNORA22	TBC1D3P1-DHX40P1	IDI2-AS1	CATSPER2P1	FAM182A	LINC00674	CTB-7E3.1	FAM74A3	MIR4313	FBXL21	LINC00337	FAM74A1	LINC00152	LOC91450	RRN3P1	PLAC4	BVES-AS1	SLCO4A1-AS1	OR7E156P	MORC2-AS1	RNF216P1	SNORD82	MIR205HG	PPAPDC1B	CBX3P2	LINC01356	C3orf65	SAA3P	SPATA31C1	DHRS4L1	LOC100630923	VPS13A-AS1	RFPL1S	C3orf79	TCL6	SNORA45B	ANKRD20A11P	HCCAT5	DPY19L2P1	MIR19A	CD27-AS1	LINC00471	DSCR4	DNM1P35	LOC101928401	MIR17HG	SHANK2-AS3	FCGR1C	CYP4F35P	FAHD2CP	LEMD1-AS1	TRG-AS1	LINC01212	RFPL3S	LOC254896	SNORA7B	A1BG-AS1	LRRC37A5P	CDRT7	RBAKDN	VN1R10P	SNORA59B	MIR1-2	POM121L9P	SNORD113-1	RMDN2-AS1	PCOLCE-AS1	C9orf170	GHRLOS	AGAP11	PLEKHA8P1	LOC646903	C5orf55	LOC730101	EPHA5-AS1	CCDC183-AS1	SCARNA8	CYP1B1-AS1	WHAMMP3	LOC100499484-C9ORF174	MIRLET7BHG	MAGEA10-MAGEA5	FAM178A	PRNT	RRN3P3	LINC01193	MTUS2-AS1	ARMCX5-GPRASP2	LINC00313	RNU5F-1	C17orf104	ZNF252P	DISC1FP1	SDR16C6P	C21orf67	APOBEC3B-AS1	TPTE2P6	BCYRN1	PWAR1	LOC100128494	C17orf102	SNORA11	LINC00583	C1orf200	PVRL2	GOLGA2P6	UBOX5-AS1	GABARAPL3	FAM138D	FTX	MAP3K14-AS1	LOC648691	ULK4P2	FAM205B	LOC100506606	LINC01220	LINC00968	FAM27L	PRSS3P2	HCP5	LRP4-AS1	FAM90A2P	C8orf31	CDRT15P2	C15orf53	KLRAP1	NBR2	GUSBP11	LINC00378	MST1L	C1orf213	CIRBP-AS1	AGAP2-AS1	GMDS-AS1	PDXDC2P	C10orf111	MIR1252	LINC01192	TPT1-AS1	NSUN5P2	SNORA70	TMEM191A	SNORA65	HERC2P9	EPB41L4A-AS1	SNORD36C	SNHG5	GLIS3-AS1	HMMR-AS1	LINC00207	GSTT1	SNORA7A	KRT18P55	C7orf66	STAG3L4	SNORA52	LOC100499484	CROCCP2	KCNQ1DN	PCAT19	LSP1P3	SNORA34	MT1DP	USP2-AS1	LOC442028	C3orf67-AS1	GNG12-AS1	EMR4P	SNORD124	C12orf36	LINC00671	SCARNA9	IGF2-AS	ZNF826P	LINC00443	SLC26A4-AS1	ABCA11P	LINC00944	WT1-AS	LOC102546299	ANKRD20A19P	LOC100505716	ZNF205-AS1	MEG3	ATP11AUN	FAM86C2P	RARA-AS1	MEG8	SNORA21	PHKA2-AS1	FLJ40288	COLCA1	MIR146A	SNORD57	LINC00922	DHRS4-AS1	DNMBP-AS1	PMS2P5	PTENP1	MIR7-3HG	PAXIP1OS	HERC2P2	SOX2-OT	SNORA36A	LMF1-AS1	C9orf139	SNORA75	SCARNA7	TPTE2P1	NEBL-AS1	PPP4R1L	TMEM254-AS1	WWC2-AS2	RNVU1-19	FAM86EP	TBC1D3P5	KIAA0125	ANKRD36BP2	LOC101927237	LINC00342	LINC01452	LOC101927827	CCDC135	NAMA	LINC00174	MIR202HG	DPH3P1
UCS;Class:TCGA;Sub_Class:Mutations		PGCP	C10orf137	C22orf24	HDGFRP3	PLK1S1	C3orf35
UTCA-FR;Class:ICGC;Sub_Class:Mutations		RPL13AP3	LINC00957	CDRT15P2
UVM;Class:TCGA;Sub_Class:Mutations		C8orf31	C16orf53